EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004780 (Gene tree)
Gene ID: 105983148
Gene Symbol: -
Alias: -
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 18383 bases
Position: chrKN672364.1:13058884-13077266
Accession: 105983148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017638	tRNA_anti-codon	PF01336.25	2.3e-14	1	1
ENSDORP00000004472	tRNA_anti-codon	PF01336.25	2.5e-14	1	1
ENSDORP00000027816	tRNA_anti-codon	PF01336.25	2.8e-14	1	1
ENSDORP00000017638	tRNA-synt_2	PF00152.20	8.4e-82	1	1
ENSDORP00000004472	tRNA-synt_2	PF00152.20	8.5e-82	1	1
ENSDORP00000027816	tRNA-synt_2	PF00152.20	6.5e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029043	-	1866	XM_013012953	ENSDORP00000027816	621 (aa)	XP_012868407	UPI000BAD128A
ENSDORT00000004780	-	1788	-	ENSDORP00000004472	595 (aa)	-	UPI000BACFC83
ENSDORT00000026042	-	1977	XM_013012954	ENSDORP00000017638	596 (aa)	XP_012868408	A0A1S3EVG2

Gene Model

Click here to download ENSDORG00000004780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004780	-	100	76.007	ENSDORG00000024214	-	100	76.007

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004780	-	100	94.975	ENSG00000065427	KARS	100	100.000	Homo_sapiens
ENSDORG00000004780	-	99	77.966	ENSAPOG00000010997	kars	99	77.966	Acanthochromis_polyacanthus
ENSDORG00000004780	-	100	93.120	ENSAMEG00000005347	KARS	100	93.120	Ailuropoda_melanoleuca
ENSDORG00000004780	-	99	73.199	ENSACIG00000000304	kars	99	74.450	Amphilophus_citrinellus
ENSDORG00000004780	-	97	79.304	ENSAOCG00000012971	kars	97	79.929	Amphiprion_ocellaris
ENSDORG00000004780	-	99	78.849	ENSAPEG00000011144	kars	99	78.849	Amphiprion_percula
ENSDORG00000004780	-	99	78.173	ENSATEG00000004954	kars	99	78.173	Anabas_testudineus
ENSDORG00000004780	-	91	85.213	ENSAPLG00000012705	KARS	97	85.688	Anas_platyrhynchos
ENSDORG00000004780	-	96	81.424	ENSACAG00000007577	KARS	90	81.424	Anolis_carolinensis
ENSDORG00000004780	-	99	79.798	ENSANAG00000031739	-	99	78.849	Aotus_nancymaae
ENSDORG00000004780	-	100	94.472	ENSANAG00000030403	-	100	94.472	Aotus_nancymaae
ENSDORG00000004780	-	99	78.983	ENSACLG00000001613	kars	98	78.983	Astatotilapia_calliptera
ENSDORG00000004780	-	97	79.828	ENSAMXG00000030719	kars	99	79.828	Astyanax_mexicanus
ENSDORG00000004780	-	100	93.300	ENSBTAG00000015677	KARS	77	93.300	Bos_taurus
ENSDORG00000004780	-	95	60.141	WBGene00002238	kars-1	98	63.419	Caenorhabditis_elegans
ENSDORG00000004780	-	100	94.305	ENSCJAG00000014213	KARS	100	94.305	Callithrix_jacchus
ENSDORG00000004780	-	100	92.960	ENSCAFG00000020069	KARS	100	92.960	Canis_familiaris
ENSDORG00000004780	-	100	93.300	ENSCAFG00020001721	KARS	100	93.300	Canis_lupus_dingo
ENSDORG00000004780	-	100	93.635	ENSCHIG00000014108	-	100	93.635	Capra_hircus
ENSDORG00000004780	-	97	92.708	ENSCHIG00000016073	-	96	92.708	Capra_hircus
ENSDORG00000004780	-	100	93.467	ENSTSYG00000001643	KARS	100	93.467	Carlito_syrichta
ENSDORG00000004780	-	100	88.462	ENSCAPG00000016234	KARS	100	88.462	Cavia_aperea
ENSDORG00000004780	-	100	95.302	ENSCPOG00000012036	KARS	100	95.302	Cavia_porcellus
ENSDORG00000004780	-	91	78.755	ENSCCAG00000030337	-	100	77.982	Cebus_capucinus
ENSDORG00000004780	-	100	94.975	ENSCCAG00000034307	-	100	94.975	Cebus_capucinus
ENSDORG00000004780	-	99	93.086	ENSCATG00000038129	KARS	99	93.504	Cercocebus_atys
ENSDORG00000004780	-	100	94.872	ENSCLAG00000007905	KARS	100	94.872	Chinchilla_lanigera
ENSDORG00000004780	-	100	92.480	ENSCSAG00000003664	KARS	100	92.480	Chlorocebus_sabaeus
ENSDORG00000004780	-	82	94.647	ENSCHOG00000013447	KARS	82	94.647	Choloepus_hoffmanni
ENSDORG00000004780	-	98	85.223	ENSCPBG00000026969	KARS	98	85.223	Chrysemys_picta_bellii
ENSDORG00000004780	-	88	72.745	ENSCPBG00000002553	-	95	72.745	Chrysemys_picta_bellii
ENSDORG00000004780	-	95	68.972	ENSCING00000009513	-	97	68.972	Ciona_intestinalis
ENSDORG00000004780	-	54	70.219	ENSCSAVG00000001136	-	96	74.400	Ciona_savignyi
ENSDORG00000004780	-	97	67.764	ENSCSAVG00000007684	-	100	65.799	Ciona_savignyi
ENSDORG00000004780	-	100	89.112	ENSCANG00000032813	KARS	100	89.112	Colobus_angolensis_palliatus
ENSDORG00000004780	-	100	94.305	ENSCGRG00001004055	KARS	100	94.305	Cricetulus_griseus_chok1gshd
ENSDORG00000004780	-	100	94.305	ENSCGRG00000014242	KARS	100	94.305	Cricetulus_griseus_crigri
ENSDORG00000004780	-	96	80.803	ENSCSEG00000008324	kars	98	80.803	Cynoglossus_semilaevis
ENSDORG00000004780	-	96	79.094	ENSCVAG00000019686	kars	99	79.094	Cyprinodon_variegatus
ENSDORG00000004780	-	97	81.379	ENSDARG00000103799	kars	99	84.990	Danio_rerio
ENSDORG00000004780	-	100	94.080	ENSDNOG00000002241	KARS	100	94.080	Dasypus_novemcinctus
ENSDORG00000004780	-	95	69.420	FBgn0027084	LysRS	98	70.123	Drosophila_melanogaster
ENSDORG00000004780	-	100	91.054	ENSETEG00000008353	KARS	100	91.054	Echinops_telfairi
ENSDORG00000004780	-	95	72.310	ENSEBUG00000001284	-	96	72.310	Eptatretus_burgeri
ENSDORG00000004780	-	100	95.159	ENSEASG00005013497	KARS	100	95.159	Equus_asinus_asinus
ENSDORG00000004780	-	100	95.159	ENSECAG00000013424	KARS	100	95.159	Equus_caballus
ENSDORG00000004780	-	97	85.386	ENSEEUG00000007042	KARS	100	84.160	Erinaceus_europaeus
ENSDORG00000004780	-	95	73.239	ENSELUG00000014575	kars	96	73.239	Esox_lucius
ENSDORG00000004780	-	98	95.369	ENSFCAG00000008573	KARS	100	94.640	Felis_catus
ENSDORG00000004780	-	98	83.276	ENSFALG00000002543	KARS	99	81.879	Ficedula_albicollis
ENSDORG00000004780	-	100	95.134	ENSFDAG00000007155	KARS	100	95.134	Fukomys_damarensis
ENSDORG00000004780	-	97	78.276	ENSFHEG00000006172	kars	99	78.276	Fundulus_heteroclitus
ENSDORG00000004780	-	97	76.248	ENSGMOG00000002633	kars	100	71.611	Gadus_morhua
ENSDORG00000004780	-	98	84.418	ENSGALG00000000907	KARS	99	84.749	Gallus_gallus
ENSDORG00000004780	-	97	79.483	ENSGAFG00000017252	kars	99	79.483	Gambusia_affinis
ENSDORG00000004780	-	99	76.923	ENSGACG00000015749	kars	98	76.923	Gasterosteus_aculeatus
ENSDORG00000004780	-	98	85.223	ENSGAGG00000023836	KARS	98	85.223	Gopherus_agassizii
ENSDORG00000004780	-	90	71.295	ENSGAGG00000011960	-	98	71.482	Gopherus_agassizii
ENSDORG00000004780	-	100	94.640	ENSGGOG00000005515	KARS	100	94.640	Gorilla_gorilla
ENSDORG00000004780	-	99	78.983	ENSHBUG00000013619	kars	98	78.983	Haplochromis_burtoni
ENSDORG00000004780	-	100	95.470	ENSHGLG00000011898	KARS	100	96.014	Heterocephalus_glaber_female
ENSDORG00000004780	-	100	84.732	ENSHGLG00000015235	-	100	84.732	Heterocephalus_glaber_female
ENSDORG00000004780	-	99	78.037	ENSHGLG00000001298	-	99	78.037	Heterocephalus_glaber_female
ENSDORG00000004780	-	100	84.564	ENSHGLG00100012523	-	100	84.564	Heterocephalus_glaber_male
ENSDORG00000004780	-	99	77.870	ENSHGLG00100006466	-	99	77.870	Heterocephalus_glaber_male
ENSDORG00000004780	-	100	95.470	ENSHGLG00100012264	KARS	100	95.470	Heterocephalus_glaber_male
ENSDORG00000004780	-	97	79.310	ENSHCOG00000002900	kars	99	76.549	Hippocampus_comes
ENSDORG00000004780	-	97	79.483	ENSIPUG00000009862	kars	99	79.483	Ictalurus_punctatus
ENSDORG00000004780	-	100	95.302	ENSSTOG00000004205	KARS	100	95.302	Ictidomys_tridecemlineatus
ENSDORG00000004780	-	100	94.631	ENSJJAG00000020406	Kars	100	94.631	Jaculus_jaculus
ENSDORG00000004780	-	97	79.861	ENSKMAG00000006434	kars	99	79.861	Kryptolebias_marmoratus
ENSDORG00000004780	-	99	78.305	ENSLBEG00000026537	kars	96	78.305	Labrus_bergylta
ENSDORG00000004780	-	99	80.952	ENSLACG00000006667	KARS	100	78.754	Latimeria_chalumnae
ENSDORG00000004780	-	85	74.704	ENSLACG00000016399	-	99	74.704	Latimeria_chalumnae
ENSDORG00000004780	-	90	69.331	ENSLOCG00000013608	-	98	69.331	Lepisosteus_oculatus
ENSDORG00000004780	-	97	80.623	ENSLOCG00000004002	kars	99	80.623	Lepisosteus_oculatus
ENSDORG00000004780	-	100	93.600	ENSLAFG00000015340	KARS	100	93.600	Loxodonta_africana
ENSDORG00000004780	-	100	92.965	ENSMFAG00000040024	KARS	100	92.965	Macaca_fascicularis
ENSDORG00000004780	-	100	92.965	ENSMNEG00000042879	-	100	92.965	Macaca_nemestrina
ENSDORG00000004780	-	86	91.456	ENSMNEG00000035832	-	99	91.456	Macaca_nemestrina
ENSDORG00000004780	-	100	93.132	ENSMLEG00000034947	KARS	100	93.132	Mandrillus_leucophaeus
ENSDORG00000004780	-	96	78.957	ENSMAMG00000021559	kars	99	75.286	Mastacembelus_armatus
ENSDORG00000004780	-	99	78.983	ENSMZEG00005014382	kars	98	78.983	Maylandia_zebra
ENSDORG00000004780	-	93	85.326	ENSMGAG00000009000	KARS	98	85.326	Meleagris_gallopavo
ENSDORG00000004780	-	100	93.600	ENSMICG00000011997	KARS	100	93.600	Microcebus_murinus
ENSDORG00000004780	-	100	93.960	ENSMOCG00000011829	Kars	100	93.960	Microtus_ochrogaster
ENSDORG00000004780	-	100	91.107	ENSMOCG00000019029	-	100	91.107	Microtus_ochrogaster
ENSDORG00000004780	-	95	80.035	ENSMMOG00000016934	kars	99	80.035	Mola_mola
ENSDORG00000004780	-	97	83.196	ENSMODG00000002238	-	97	83.196	Monodelphis_domestica
ENSDORG00000004780	-	97	89.081	ENSMODG00000002215	-	99	89.081	Monodelphis_domestica
ENSDORG00000004780	-	99	77.797	ENSMALG00000020858	kars	99	77.797	Monopterus_albus
ENSDORG00000004780	-	86	88.387	MGP_CAROLIEiJ_G0031588	Kars	100	89.655	Mus_caroli
ENSDORG00000004780	-	100	92.953	ENSMUSG00000031948	Kars	100	92.953	Mus_musculus
ENSDORG00000004780	-	100	92.617	MGP_PahariEiJ_G0023186	Kars	100	92.617	Mus_pahari
ENSDORG00000004780	-	100	92.953	MGP_SPRETEiJ_G0032706	Kars	100	92.953	Mus_spretus
ENSDORG00000004780	-	100	93.120	ENSMPUG00000009871	KARS	100	93.120	Mustela_putorius_furo
ENSDORG00000004780	-	80	59.424	ENSMLUG00000026871	-	97	58.524	Myotis_lucifugus
ENSDORG00000004780	-	100	93.635	ENSMLUG00000015119	-	100	93.635	Myotis_lucifugus
ENSDORG00000004780	-	100	95.134	ENSNGAG00000018820	-	100	95.134	Nannospalax_galili
ENSDORG00000004780	-	95	94.326	ENSNGAG00000022944	-	96	94.326	Nannospalax_galili
ENSDORG00000004780	-	99	78.814	ENSNBRG00000011098	kars	98	78.814	Neolamprologus_brichardi
ENSDORG00000004780	-	100	94.640	ENSNLEG00000013072	KARS	100	94.640	Nomascus_leucogenys
ENSDORG00000004780	-	99	82.496	ENSMEUG00000008684	KARS	99	82.496	Notamacropus_eugenii
ENSDORG00000004780	-	97	95.147	ENSOPRG00000012544	KARS	100	93.791	Ochotona_princeps
ENSDORG00000004780	-	97	68.448	ENSODEG00000009464	-	100	68.448	Octodon_degus
ENSDORG00000004780	-	100	93.590	ENSODEG00000013099	-	100	93.590	Octodon_degus
ENSDORG00000004780	-	99	79.153	ENSONIG00000005937	kars	99	79.153	Oreochromis_niloticus
ENSDORG00000004780	-	97	89.583	ENSOANG00000008179	KARS	97	89.583	Ornithorhynchus_anatinus
ENSDORG00000004780	-	100	87.584	ENSOCUG00000015553	KARS	100	87.919	Oryctolagus_cuniculus
ENSDORG00000004780	-	96	80.385	ENSORLG00000007627	kars	99	76.771	Oryzias_latipes
ENSDORG00000004780	-	96	80.385	ENSORLG00020010056	kars	99	76.771	Oryzias_latipes_hni
ENSDORG00000004780	-	96	80.210	ENSORLG00015008179	kars	99	76.606	Oryzias_latipes_hsok
ENSDORG00000004780	-	96	80.522	ENSOMEG00000001710	kars	98	80.522	Oryzias_melastigma
ENSDORG00000004780	-	100	86.880	ENSOGAG00000005903	KARS	100	86.880	Otolemur_garnettii
ENSDORG00000004780	-	92	94.182	ENSOARG00000006928	KARS	96	94.182	Ovis_aries
ENSDORG00000004780	-	100	94.640	ENSPPAG00000036192	KARS	100	94.640	Pan_paniscus
ENSDORG00000004780	-	100	94.472	ENSPPRG00000003027	KARS	100	94.472	Panthera_pardus
ENSDORG00000004780	-	100	94.640	ENSPTIG00000008011	KARS	100	94.640	Panthera_tigris_altaica
ENSDORG00000004780	-	100	94.807	ENSPTRG00000008364	KARS	100	94.807	Pan_troglodytes
ENSDORG00000004780	-	100	93.300	ENSPANG00000024106	KARS	100	92.800	Papio_anubis
ENSDORG00000004780	-	97	76.884	ENSPKIG00000009896	kars	99	79.066	Paramormyrops_kingsleyae
ENSDORG00000004780	-	94	85.868	ENSPSIG00000009294	KARS	96	85.868	Pelodiscus_sinensis
ENSDORG00000004780	-	89	73.295	ENSPSIG00000003041	-	97	73.295	Pelodiscus_sinensis
ENSDORG00000004780	-	88	83.109	ENSPMGG00000006117	kars	99	80.177	Periophthalmus_magnuspinnatus
ENSDORG00000004780	-	100	93.960	ENSPEMG00000012277	Kars	100	93.960	Peromyscus_maniculatus_bairdii
ENSDORG00000004780	-	95	75.350	ENSPMAG00000008360	-	99	71.520	Petromyzon_marinus
ENSDORG00000004780	-	97	85.243	ENSPCIG00000025469	-	99	83.146	Phascolarctos_cinereus
ENSDORG00000004780	-	97	91.738	ENSPCIG00000010761	-	97	91.738	Phascolarctos_cinereus
ENSDORG00000004780	-	95	79.189	ENSPFOG00000013253	kars	99	74.756	Poecilia_formosa
ENSDORG00000004780	-	97	79.102	ENSPLAG00000004189	kars	99	79.102	Poecilia_latipinna
ENSDORG00000004780	-	97	79.275	ENSPMEG00000015698	kars	99	79.275	Poecilia_mexicana
ENSDORG00000004780	-	97	78.793	ENSPREG00000023179	kars	99	78.793	Poecilia_reticulata
ENSDORG00000004780	-	100	94.080	ENSPPYG00000007567	KARS	100	94.080	Pongo_abelii
ENSDORG00000004780	-	88	85.660	ENSPCAG00000010790	KARS	100	85.660	Procavia_capensis
ENSDORG00000004780	-	100	84.320	ENSPCOG00000003166	KARS	100	84.320	Propithecus_coquereli
ENSDORG00000004780	-	100	93.750	ENSPVAG00000006746	KARS	100	93.750	Pteropus_vampyrus
ENSDORG00000004780	-	99	78.983	ENSPNYG00000013095	kars	98	78.983	Pundamilia_nyererei
ENSDORG00000004780	-	97	81.067	ENSPNAG00000013828	kars	99	81.067	Pygocentrus_nattereri
ENSDORG00000004780	-	100	92.013	ENSRNOG00000019456	Kars	100	92.492	Rattus_norvegicus
ENSDORG00000004780	-	99	93.255	ENSRBIG00000030118	KARS	99	93.504	Rhinopithecus_bieti
ENSDORG00000004780	-	100	92.640	ENSRROG00000041418	KARS	100	92.640	Rhinopithecus_roxellana
ENSDORG00000004780	-	86	60.116	YDR037W	KRS1	97	55.822	Saccharomyces_cerevisiae
ENSDORG00000004780	-	75	33.895	YNL073W	-	82	33.895	Saccharomyces_cerevisiae
ENSDORG00000004780	-	100	94.975	ENSSBOG00000019255	KARS	100	94.975	Saimiri_boliviensis_boliviensis
ENSDORG00000004780	-	99	73.194	ENSSHAG00000002050	-	99	73.194	Sarcophilus_harrisii
ENSDORG00000004780	-	97	83.477	ENSSHAG00000001359	-	99	83.477	Sarcophilus_harrisii
ENSDORG00000004780	-	93	76.715	ENSSHAG00000009005	-	99	76.715	Sarcophilus_harrisii
ENSDORG00000004780	-	94	79.501	ENSSFOG00015014837	kars	99	79.501	Scleropages_formosus
ENSDORG00000004780	-	99	79.153	ENSSMAG00000021441	kars	99	79.153	Scophthalmus_maximus
ENSDORG00000004780	-	99	78.983	ENSSDUG00000001202	kars	99	78.983	Seriola_dumerili
ENSDORG00000004780	-	97	79.376	ENSSLDG00000021220	kars	98	79.376	Seriola_lalandi_dorsalis
ENSDORG00000004780	-	76	97.898	ENSSARG00000011493	KARS	79	97.898	Sorex_araneus
ENSDORG00000004780	-	97	83.219	ENSSPUG00000004974	KARS	99	82.353	Sphenodon_punctatus
ENSDORG00000004780	-	63	64.785	ENSSPUG00000000449	-	86	64.785	Sphenodon_punctatus
ENSDORG00000004780	-	97	78.646	ENSSPAG00000020365	kars	97	78.746	Stegastes_partitus
ENSDORG00000004780	-	100	93.635	ENSSSCG00000002704	KARS	100	93.635	Sus_scrofa
ENSDORG00000004780	-	94	85.331	ENSTGUG00000008400	KARS	99	85.331	Taeniopygia_guttata
ENSDORG00000004780	-	97	77.951	ENSTRUG00000017551	kars	99	74.548	Takifugu_rubripes
ENSDORG00000004780	-	86	83.236	ENSTNIG00000009351	kars	95	79.715	Tetraodon_nigroviridis
ENSDORG00000004780	-	97	73.438	ENSTBEG00000004610	KARS	100	73.438	Tupaia_belangeri
ENSDORG00000004780	-	100	92.640	ENSTTRG00000001221	KARS	100	92.640	Tursiops_truncatus
ENSDORG00000004780	-	100	93.635	ENSUAMG00000017557	KARS	100	93.635	Ursus_americanus
ENSDORG00000004780	-	100	93.120	ENSUMAG00000014559	KARS	100	93.120	Ursus_maritimus
ENSDORG00000004780	-	100	92.160	ENSVPAG00000003716	KARS	100	92.160	Vicugna_pacos
ENSDORG00000004780	-	100	92.965	ENSVVUG00000024338	KARS	100	92.965	Vulpes_vulpes
ENSDORG00000004780	-	98	77.513	ENSXETG00000003569	kars	99	77.513	Xenopus_tropicalis
ENSDORG00000004780	-	95	79.218	ENSXCOG00000011313	kars	99	79.218	Xiphophorus_couchianus
ENSDORG00000004780	-	97	79.138	ENSXMAG00000003191	kars	99	79.138	Xiphophorus_maculatus