EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004855 (Gene tree)
Gene ID: 105985283
Gene Symbol: Rc3h1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 48727 bases
Position: chrKN672373.1:9760933-9809659
Accession: 105985283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000004543	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004855	-	4378	XM_013015769	ENSDORP00000004543	1131 (aa)	XP_012871223	A0A1S3F3K9

Gene Model

Click here to download ENSDORG00000004855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004855	Rc3h1	92	54.570	ENSDORG00000006398	Rc3h2	85	55.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004855	Rc3h1	100	96.028	ENSG00000135870	RC3H1	100	96.028	Homo_sapiens
ENSDORG00000004855	Rc3h1	100	95.406	ENSAMEG00000015657	RC3H1	100	95.406	Ailuropoda_melanoleuca
ENSDORG00000004855	Rc3h1	100	86.736	ENSAPLG00000005341	RC3H1	100	86.026	Anas_platyrhynchos
ENSDORG00000004855	Rc3h1	100	84.178	ENSACAG00000015271	RC3H1	100	84.063	Anolis_carolinensis
ENSDORG00000004855	Rc3h1	100	95.763	ENSANAG00000036716	RC3H1	100	95.763	Aotus_nancymaae
ENSDORG00000004855	Rc3h1	100	94.263	ENSBTAG00000052708	RC3H1	100	94.263	Bos_taurus
ENSDORG00000004855	Rc3h1	100	95.410	ENSCJAG00000009106	RC3H1	100	95.410	Callithrix_jacchus
ENSDORG00000004855	Rc3h1	100	95.318	ENSCAFG00000014434	RC3H1	100	95.318	Canis_familiaris
ENSDORG00000004855	Rc3h1	100	95.234	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSDORG00000004855	Rc3h1	100	94.788	ENSCHIG00000002873	RC3H1	100	94.788	Capra_hircus
ENSDORG00000004855	Rc3h1	99	93.728	ENSTSYG00000003913	RC3H1	99	93.728	Carlito_syrichta
ENSDORG00000004855	Rc3h1	100	90.909	ENSCPOG00000004349	RC3H1	100	90.909	Cavia_porcellus
ENSDORG00000004855	Rc3h1	100	93.645	ENSCCAG00000025652	RC3H1	100	93.645	Cebus_capucinus
ENSDORG00000004855	Rc3h1	100	96.028	ENSCATG00000033497	RC3H1	100	96.028	Cercocebus_atys
ENSDORG00000004855	Rc3h1	100	94.175	ENSCLAG00000011267	RC3H1	100	94.175	Chinchilla_lanigera
ENSDORG00000004855	Rc3h1	96	95.764	ENSCSAG00000011823	RC3H1	85	95.764	Chlorocebus_sabaeus
ENSDORG00000004855	Rc3h1	100	89.016	ENSCPBG00000014670	RC3H1	100	88.313	Chrysemys_picta_bellii
ENSDORG00000004855	Rc3h1	100	96.032	ENSCANG00000032120	RC3H1	100	96.032	Colobus_angolensis_palliatus
ENSDORG00000004855	Rc3h1	100	93.286	ENSCGRG00001020812	Rc3h1	100	93.198	Cricetulus_griseus_chok1gshd
ENSDORG00000004855	Rc3h1	100	93.286	ENSCGRG00000011952	Rc3h1	100	93.198	Cricetulus_griseus_crigri
ENSDORG00000004855	Rc3h1	55	92.605	ENSDNOG00000011494	RC3H1	98	92.695	Dasypus_novemcinctus
ENSDORG00000004855	Rc3h1	82	94.611	ENSETEG00000012064	RC3H1	87	94.611	Echinops_telfairi
ENSDORG00000004855	Rc3h1	100	94.346	ENSEASG00005017000	RC3H1	100	94.346	Equus_asinus_asinus
ENSDORG00000004855	Rc3h1	100	94.170	ENSECAG00000021208	RC3H1	100	94.170	Equus_caballus
ENSDORG00000004855	Rc3h1	89	81.633	ENSEEUG00000014861	RC3H1	93	81.633	Erinaceus_europaeus
ENSDORG00000004855	Rc3h1	100	95.499	ENSFCAG00000014924	RC3H1	100	95.499	Felis_catus
ENSDORG00000004855	Rc3h1	100	85.927	ENSFALG00000002947	RC3H1	100	85.389	Ficedula_albicollis
ENSDORG00000004855	Rc3h1	100	94.086	ENSFDAG00000013303	RC3H1	100	94.175	Fukomys_damarensis
ENSDORG00000004855	Rc3h1	100	86.140	ENSGALG00000004587	RC3H1	100	85.689	Gallus_gallus
ENSDORG00000004855	Rc3h1	100	87.258	ENSGAGG00000018194	RC3H1	100	86.907	Gopherus_agassizii
ENSDORG00000004855	Rc3h1	100	89.534	ENSGGOG00000005735	RC3H1	100	89.534	Gorilla_gorilla
ENSDORG00000004855	Rc3h1	88	88.092	ENSHGLG00000004183	-	100	88.092	Heterocephalus_glaber_female
ENSDORG00000004855	Rc3h1	100	93.910	ENSHGLG00100008577	RC3H1	100	93.998	Heterocephalus_glaber_male
ENSDORG00000004855	Rc3h1	100	95.318	ENSSTOG00000016033	RC3H1	100	95.760	Ictidomys_tridecemlineatus
ENSDORG00000004855	Rc3h1	100	94.253	ENSJJAG00000018915	Rc3h1	100	94.341	Jaculus_jaculus
ENSDORG00000004855	Rc3h1	100	74.739	ENSLACG00000016186	RC3H1	100	77.859	Latimeria_chalumnae
ENSDORG00000004855	Rc3h1	97	95.351	ENSLAFG00000004367	RC3H1	100	95.442	Loxodonta_africana
ENSDORG00000004855	Rc3h1	100	95.940	ENSMFAG00000033725	RC3H1	100	95.940	Macaca_fascicularis
ENSDORG00000004855	Rc3h1	100	95.852	ENSMMUG00000000630	RC3H1	100	95.852	Macaca_mulatta
ENSDORG00000004855	Rc3h1	100	96.028	ENSMNEG00000035968	RC3H1	100	96.028	Macaca_nemestrina
ENSDORG00000004855	Rc3h1	100	95.940	ENSMLEG00000037455	RC3H1	100	95.940	Mandrillus_leucophaeus
ENSDORG00000004855	Rc3h1	88	93.649	ENSMAUG00000020864	Rc3h1	93	93.649	Mesocricetus_auratus
ENSDORG00000004855	Rc3h1	100	96.113	ENSMICG00000003000	RC3H1	100	96.113	Microcebus_murinus
ENSDORG00000004855	Rc3h1	93	92.227	ENSMOCG00000016587	Rc3h1	98	91.848	Microtus_ochrogaster
ENSDORG00000004855	Rc3h1	100	90.300	ENSMODG00000004289	RC3H1	100	90.388	Monodelphis_domestica
ENSDORG00000004855	Rc3h1	100	92.668	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.668	Mus_caroli
ENSDORG00000004855	Rc3h1	100	92.491	ENSMUSG00000040423	Rc3h1	100	92.580	Mus_musculus
ENSDORG00000004855	Rc3h1	100	92.403	MGP_PahariEiJ_G0027992	Rc3h1	100	92.403	Mus_pahari
ENSDORG00000004855	Rc3h1	100	92.491	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.580	Mus_spretus
ENSDORG00000004855	Rc3h1	100	95.146	ENSMPUG00000004747	RC3H1	100	95.146	Mustela_putorius_furo
ENSDORG00000004855	Rc3h1	100	94.611	ENSMLUG00000011127	RC3H1	100	94.611	Myotis_lucifugus
ENSDORG00000004855	Rc3h1	100	94.523	ENSNGAG00000011135	Rc3h1	100	94.611	Nannospalax_galili
ENSDORG00000004855	Rc3h1	100	95.940	ENSNLEG00000015327	RC3H1	100	95.940	Nomascus_leucogenys
ENSDORG00000004855	Rc3h1	99	82.019	ENSOPRG00000013068	RC3H1	99	81.577	Ochotona_princeps
ENSDORG00000004855	Rc3h1	100	93.557	ENSODEG00000014185	RC3H1	100	93.645	Octodon_degus
ENSDORG00000004855	Rc3h1	100	89.694	ENSOANG00000000924	RC3H1	100	89.782	Ornithorhynchus_anatinus
ENSDORG00000004855	Rc3h1	99	94.624	ENSOCUG00000004930	RC3H1	98	94.713	Oryctolagus_cuniculus
ENSDORG00000004855	Rc3h1	100	88.624	ENSOGAG00000004044	RC3H1	100	88.713	Otolemur_garnettii
ENSDORG00000004855	Rc3h1	100	95.000	ENSOARG00000013011	RC3H1	100	95.000	Ovis_aries
ENSDORG00000004855	Rc3h1	100	96.032	ENSPPAG00000039253	RC3H1	100	96.032	Pan_paniscus
ENSDORG00000004855	Rc3h1	100	94.965	ENSPPRG00000009007	RC3H1	100	94.965	Panthera_pardus
ENSDORG00000004855	Rc3h1	100	95.339	ENSPTIG00000015326	RC3H1	100	95.339	Panthera_tigris_altaica
ENSDORG00000004855	Rc3h1	100	96.032	ENSPTRG00000001702	RC3H1	100	96.032	Pan_troglodytes
ENSDORG00000004855	Rc3h1	100	95.940	ENSPANG00000008886	RC3H1	100	95.940	Papio_anubis
ENSDORG00000004855	Rc3h1	100	87.807	ENSPSIG00000016181	RC3H1	100	88.070	Pelodiscus_sinensis
ENSDORG00000004855	Rc3h1	100	92.756	ENSPEMG00000011966	Rc3h1	100	92.668	Peromyscus_maniculatus_bairdii
ENSDORG00000004855	Rc3h1	70	92.785	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSDORG00000004855	Rc3h1	100	92.763	ENSPPYG00000000490	RC3H1	98	95.024	Pongo_abelii
ENSDORG00000004855	Rc3h1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSDORG00000004855	Rc3h1	83	95.080	ENSPCOG00000021795	RC3H1	96	95.187	Propithecus_coquereli
ENSDORG00000004855	Rc3h1	100	86.926	ENSPVAG00000007593	RC3H1	100	86.749	Pteropus_vampyrus
ENSDORG00000004855	Rc3h1	97	60.969	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSDORG00000004855	Rc3h1	100	95.944	ENSRBIG00000037743	RC3H1	100	95.944	Rhinopithecus_bieti
ENSDORG00000004855	Rc3h1	100	95.852	ENSRROG00000036546	RC3H1	100	95.852	Rhinopithecus_roxellana
ENSDORG00000004855	Rc3h1	93	85.175	ENSSBOG00000010664	RC3H1	100	89.573	Saimiri_boliviensis_boliviensis
ENSDORG00000004855	Rc3h1	100	89.692	ENSSHAG00000007589	RC3H1	100	89.780	Sarcophilus_harrisii
ENSDORG00000004855	Rc3h1	87	86.937	ENSSARG00000004660	RC3H1	86	86.937	Sorex_araneus
ENSDORG00000004855	Rc3h1	100	83.684	ENSSPUG00000018472	RC3H1	100	83.670	Sphenodon_punctatus
ENSDORG00000004855	Rc3h1	100	95.760	ENSSSCG00000015498	RC3H1	100	95.760	Sus_scrofa
ENSDORG00000004855	Rc3h1	100	86.567	ENSTGUG00000004090	RC3H1	100	85.940	Taeniopygia_guttata
ENSDORG00000004855	Rc3h1	93	91.034	ENSTBEG00000005015	RC3H1	89	95.913	Tupaia_belangeri
ENSDORG00000004855	Rc3h1	100	94.802	ENSTTRG00000008572	RC3H1	100	94.802	Tursiops_truncatus
ENSDORG00000004855	Rc3h1	100	94.700	ENSUAMG00000019525	RC3H1	100	94.700	Ursus_americanus
ENSDORG00000004855	Rc3h1	100	95.234	ENSUMAG00000020087	RC3H1	100	95.234	Ursus_maritimus
ENSDORG00000004855	Rc3h1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSDORG00000004855	Rc3h1	100	94.982	ENSVVUG00000014201	RC3H1	100	94.982	Vulpes_vulpes
ENSDORG00000004855	Rc3h1	100	78.329	ENSXETG00000020030	rc3h1	100	78.155	Xenopus_tropicalis