EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000004921 (Gene tree)
Gene ID: 105985302
Gene Symbol: Ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 29266 bases
Position: chrKN672374.1:16377515-16406780
Accession: 105985302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000004605	PPR	PF01535.20	1.7e-05	1	1
ENSDORP00000004605	MRP-S27	PF10037.9	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004921	-	1716	XM_013015804	ENSDORP00000004605	387 (aa)	XP_012871258	A0A1S3F3P6

Gene Model

Click here to download ENSDORG00000004921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004921	Ptcd2	100	78.295	ENSG00000049883	PTCD2	100	79.310	Homo_sapiens
ENSDORG00000004921	Ptcd2	90	48.563	ENSAPOG00000020682	ptcd2	91	48.563	Acanthochromis_polyacanthus
ENSDORG00000004921	Ptcd2	100	76.486	ENSAMEG00000007194	PTCD2	99	76.486	Ailuropoda_melanoleuca
ENSDORG00000004921	Ptcd2	89	41.834	ENSACIG00000002053	ptcd2	100	41.834	Amphilophus_citrinellus
ENSDORG00000004921	Ptcd2	99	45.288	ENSAOCG00000006616	ptcd2	96	45.288	Amphiprion_ocellaris
ENSDORG00000004921	Ptcd2	99	45.573	ENSAPEG00000022926	ptcd2	96	45.573	Amphiprion_percula
ENSDORG00000004921	Ptcd2	98	57.407	ENSACAG00000009747	PTCD2	96	57.407	Anolis_carolinensis
ENSDORG00000004921	Ptcd2	100	76.744	ENSANAG00000029353	PTCD2	99	76.744	Aotus_nancymaae
ENSDORG00000004921	Ptcd2	98	44.180	ENSACLG00000027742	ptcd2	96	44.180	Astatotilapia_calliptera
ENSDORG00000004921	Ptcd2	86	44.880	ENSAMXG00000029404	ptcd2	88	44.880	Astyanax_mexicanus
ENSDORG00000004921	Ptcd2	100	76.804	ENSBTAG00000014675	PTCD2	100	76.804	Bos_taurus
ENSDORG00000004921	Ptcd2	100	75.969	ENSCJAG00000016364	PTCD2	99	75.969	Callithrix_jacchus
ENSDORG00000004921	Ptcd2	100	74.677	ENSCAFG00000007982	PTCD2	90	74.677	Canis_familiaris
ENSDORG00000004921	Ptcd2	89	77.746	ENSCAFG00020019147	PTCD2	97	77.746	Canis_lupus_dingo
ENSDORG00000004921	Ptcd2	100	78.608	ENSCHIG00000017118	PTCD2	100	78.608	Capra_hircus
ENSDORG00000004921	Ptcd2	100	74.160	ENSCPOG00000040168	PTCD2	100	74.160	Cavia_porcellus
ENSDORG00000004921	Ptcd2	100	76.227	ENSCCAG00000029389	-	99	76.227	Cebus_capucinus
ENSDORG00000004921	Ptcd2	83	71.207	ENSCCAG00000021996	-	98	71.207	Cebus_capucinus
ENSDORG00000004921	Ptcd2	100	76.546	ENSCATG00000019069	PTCD2	100	76.546	Cercocebus_atys
ENSDORG00000004921	Ptcd2	100	75.194	ENSCLAG00000000072	PTCD2	100	75.194	Chinchilla_lanigera
ENSDORG00000004921	Ptcd2	100	78.036	ENSCSAG00000015623	PTCD2	100	78.295	Chlorocebus_sabaeus
ENSDORG00000004921	Ptcd2	89	59.770	ENSCHOG00000010634	PTCD2	100	59.770	Choloepus_hoffmanni
ENSDORG00000004921	Ptcd2	97	54.813	ENSCPBG00000000216	PTCD2	96	54.813	Chrysemys_picta_bellii
ENSDORG00000004921	Ptcd2	100	77.519	ENSCANG00000035636	PTCD2	99	77.519	Colobus_angolensis_palliatus
ENSDORG00000004921	Ptcd2	100	74.160	ENSCGRG00001015289	Ptcd2	84	74.160	Cricetulus_griseus_chok1gshd
ENSDORG00000004921	Ptcd2	100	74.160	ENSCGRG00000006193	Ptcd2	84	74.160	Cricetulus_griseus_crigri
ENSDORG00000004921	Ptcd2	90	45.977	ENSCVAG00000001285	ptcd2	89	45.977	Cyprinodon_variegatus
ENSDORG00000004921	Ptcd2	97	46.561	ENSDARG00000035391	ptcd2	97	46.561	Danio_rerio
ENSDORG00000004921	Ptcd2	100	73.902	ENSDNOG00000008719	PTCD2	100	73.902	Dasypus_novemcinctus
ENSDORG00000004921	Ptcd2	100	68.557	ENSETEG00000016542	PTCD2	99	68.557	Echinops_telfairi
ENSDORG00000004921	Ptcd2	100	75.711	ENSEASG00005018038	PTCD2	100	75.711	Equus_asinus_asinus
ENSDORG00000004921	Ptcd2	100	75.969	ENSECAG00000007022	PTCD2	98	75.969	Equus_caballus
ENSDORG00000004921	Ptcd2	100	69.767	ENSEEUG00000014031	PTCD2	99	69.767	Erinaceus_europaeus
ENSDORG00000004921	Ptcd2	91	50.708	ENSELUG00000003584	ptcd2	92	50.708	Esox_lucius
ENSDORG00000004921	Ptcd2	100	69.509	ENSFCAG00000045432	PTCD2	82	69.509	Felis_catus
ENSDORG00000004921	Ptcd2	84	50.459	ENSFALG00000010299	PTCD2	99	50.459	Ficedula_albicollis
ENSDORG00000004921	Ptcd2	100	74.677	ENSFDAG00000018461	PTCD2	100	74.677	Fukomys_damarensis
ENSDORG00000004921	Ptcd2	91	50.281	ENSGMOG00000003637	ptcd2	92	50.281	Gadus_morhua
ENSDORG00000004921	Ptcd2	90	48.857	ENSGALG00000038260	PTCD2	92	48.857	Gallus_gallus
ENSDORG00000004921	Ptcd2	90	61.143	ENSGAGG00000021952	PTCD2	90	61.143	Gopherus_agassizii
ENSDORG00000004921	Ptcd2	100	78.036	ENSGGOG00000010695	PTCD2	99	78.036	Gorilla_gorilla
ENSDORG00000004921	Ptcd2	98	44.180	ENSHBUG00000009191	ptcd2	96	44.180	Haplochromis_burtoni
ENSDORG00000004921	Ptcd2	100	73.902	ENSHGLG00000001234	PTCD2	100	73.902	Heterocephalus_glaber_female
ENSDORG00000004921	Ptcd2	100	73.902	ENSHGLG00100015419	PTCD2	100	73.902	Heterocephalus_glaber_male
ENSDORG00000004921	Ptcd2	90	47.564	ENSHCOG00000001703	ptcd2	90	47.564	Hippocampus_comes
ENSDORG00000004921	Ptcd2	86	45.783	ENSIPUG00000006080	ptcd2	90	46.243	Ictalurus_punctatus
ENSDORG00000004921	Ptcd2	99	77.979	ENSSTOG00000006596	PTCD2	99	77.979	Ictidomys_tridecemlineatus
ENSDORG00000004921	Ptcd2	100	75.969	ENSJJAG00000024388	Ptcd2	100	75.969	Jaculus_jaculus
ENSDORG00000004921	Ptcd2	91	42.817	ENSKMAG00000009329	ptcd2	93	42.817	Kryptolebias_marmoratus
ENSDORG00000004921	Ptcd2	98	46.032	ENSLBEG00000024871	ptcd2	95	46.032	Labrus_bergylta
ENSDORG00000004921	Ptcd2	98	52.880	ENSLOCG00000011122	ptcd2	98	52.880	Lepisosteus_oculatus
ENSDORG00000004921	Ptcd2	81	74.603	ENSLAFG00000004115	PTCD2	100	74.921	Loxodonta_africana
ENSDORG00000004921	Ptcd2	100	77.003	ENSMFAG00000031516	PTCD2	99	77.003	Macaca_fascicularis
ENSDORG00000004921	Ptcd2	100	76.744	ENSMNEG00000007537	PTCD2	100	76.744	Macaca_nemestrina
ENSDORG00000004921	Ptcd2	100	76.744	ENSMLEG00000031093	PTCD2	99	76.744	Mandrillus_leucophaeus
ENSDORG00000004921	Ptcd2	98	47.090	ENSMAMG00000018529	ptcd2	97	47.090	Mastacembelus_armatus
ENSDORG00000004921	Ptcd2	98	44.180	ENSMZEG00005003625	ptcd2	96	44.180	Maylandia_zebra
ENSDORG00000004921	Ptcd2	90	49.713	ENSMGAG00000005033	PTCD2	100	49.713	Meleagris_gallopavo
ENSDORG00000004921	Ptcd2	100	59.690	ENSMAUG00000020253	Ptcd2	100	59.690	Mesocricetus_auratus
ENSDORG00000004921	Ptcd2	100	78.295	ENSMICG00000004535	PTCD2	99	78.295	Microcebus_murinus
ENSDORG00000004921	Ptcd2	100	73.902	ENSMOCG00000019985	Ptcd2	100	73.902	Microtus_ochrogaster
ENSDORG00000004921	Ptcd2	100	56.701	ENSMODG00000001695	PTCD2	100	56.701	Monodelphis_domestica
ENSDORG00000004921	Ptcd2	90	48.851	ENSMALG00000022372	ptcd2	91	48.851	Monopterus_albus
ENSDORG00000004921	Ptcd2	100	72.868	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.868	Mus_caroli
ENSDORG00000004921	Ptcd2	100	71.835	ENSMUSG00000021650	Ptcd2	100	71.835	Mus_musculus
ENSDORG00000004921	Ptcd2	100	73.902	MGP_PahariEiJ_G0015904	Ptcd2	100	73.902	Mus_pahari
ENSDORG00000004921	Ptcd2	100	72.093	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.093	Mus_spretus
ENSDORG00000004921	Ptcd2	100	76.486	ENSMPUG00000014401	PTCD2	100	76.486	Mustela_putorius_furo
ENSDORG00000004921	Ptcd2	100	74.160	ENSMLUG00000007374	PTCD2	99	74.935	Myotis_lucifugus
ENSDORG00000004921	Ptcd2	100	73.385	ENSNGAG00000005027	Ptcd2	100	73.385	Nannospalax_galili
ENSDORG00000004921	Ptcd2	85	45.152	ENSNBRG00000000092	-	100	45.152	Neolamprologus_brichardi
ENSDORG00000004921	Ptcd2	98	44.180	ENSNBRG00000008174	ptcd2	97	44.180	Neolamprologus_brichardi
ENSDORG00000004921	Ptcd2	100	76.744	ENSNLEG00000004516	PTCD2	99	76.744	Nomascus_leucogenys
ENSDORG00000004921	Ptcd2	81	53.035	ENSMEUG00000014012	-	82	53.035	Notamacropus_eugenii
ENSDORG00000004921	Ptcd2	100	73.127	ENSOPRG00000007290	PTCD2	99	73.127	Ochotona_princeps
ENSDORG00000004921	Ptcd2	100	73.590	ENSODEG00000016417	PTCD2	100	73.590	Octodon_degus
ENSDORG00000004921	Ptcd2	82	45.768	ENSONIG00000011269	ptcd2	92	45.768	Oreochromis_niloticus
ENSDORG00000004921	Ptcd2	95	77.236	ENSOCUG00000007970	PTCD2	100	76.227	Oryctolagus_cuniculus
ENSDORG00000004921	Ptcd2	98	44.444	ENSORLG00000003851	ptcd2	95	44.444	Oryzias_latipes
ENSDORG00000004921	Ptcd2	98	43.651	ENSORLG00020009823	ptcd2	97	43.651	Oryzias_latipes_hni
ENSDORG00000004921	Ptcd2	90	45.429	ENSORLG00015016777	ptcd2	99	45.584	Oryzias_latipes_hsok
ENSDORG00000004921	Ptcd2	98	43.122	ENSOMEG00000012396	ptcd2	90	43.122	Oryzias_melastigma
ENSDORG00000004921	Ptcd2	100	75.194	ENSOGAG00000008390	PTCD2	99	75.194	Otolemur_garnettii
ENSDORG00000004921	Ptcd2	100	77.835	ENSOARG00000005087	PTCD2	99	77.835	Ovis_aries
ENSDORG00000004921	Ptcd2	100	78.036	ENSPPAG00000028480	PTCD2	99	78.036	Pan_paniscus
ENSDORG00000004921	Ptcd2	100	77.778	ENSPTRG00000016968	PTCD2	99	77.778	Pan_troglodytes
ENSDORG00000004921	Ptcd2	89	80.290	ENSPANG00000006611	PTCD2	89	80.290	Papio_anubis
ENSDORG00000004921	Ptcd2	93	48.476	ENSPKIG00000019896	ptcd2	93	48.476	Paramormyrops_kingsleyae
ENSDORG00000004921	Ptcd2	79	62.866	ENSPSIG00000014559	PTCD2	95	62.866	Pelodiscus_sinensis
ENSDORG00000004921	Ptcd2	100	72.494	ENSPEMG00000000884	Ptcd2	100	72.494	Peromyscus_maniculatus_bairdii
ENSDORG00000004921	Ptcd2	100	60.724	ENSPCIG00000029047	PTCD2	100	60.724	Phascolarctos_cinereus
ENSDORG00000004921	Ptcd2	98	43.386	ENSPLAG00000010456	ptcd2	97	43.386	Poecilia_latipinna
ENSDORG00000004921	Ptcd2	93	44.628	ENSPREG00000021797	ptcd2	92	44.628	Poecilia_reticulata
ENSDORG00000004921	Ptcd2	100	67.959	ENSPPYG00000015543	PTCD2	99	67.959	Pongo_abelii
ENSDORG00000004921	Ptcd2	74	66.319	ENSPCAG00000006806	PTCD2	90	66.319	Procavia_capensis
ENSDORG00000004921	Ptcd2	100	74.677	ENSPVAG00000010935	PTCD2	99	74.677	Pteropus_vampyrus
ENSDORG00000004921	Ptcd2	98	44.180	ENSPNYG00000003122	ptcd2	96	44.180	Pundamilia_nyererei
ENSDORG00000004921	Ptcd2	99	46.512	ENSPNAG00000021490	ptcd2	99	46.512	Pygocentrus_nattereri
ENSDORG00000004921	Ptcd2	100	75.194	ENSRNOG00000028403	Ptcd2	100	75.194	Rattus_norvegicus
ENSDORG00000004921	Ptcd2	100	72.351	ENSRBIG00000032929	PTCD2	99	72.351	Rhinopithecus_bieti
ENSDORG00000004921	Ptcd2	100	77.003	ENSRROG00000000080	PTCD2	100	77.003	Rhinopithecus_roxellana
ENSDORG00000004921	Ptcd2	100	75.452	ENSSBOG00000018911	PTCD2	100	75.452	Saimiri_boliviensis_boliviensis
ENSDORG00000004921	Ptcd2	100	59.690	ENSSHAG00000003833	PTCD2	99	59.690	Sarcophilus_harrisii
ENSDORG00000004921	Ptcd2	90	46.286	ENSSFOG00015015415	ptcd2	91	46.286	Scleropages_formosus
ENSDORG00000004921	Ptcd2	92	44.789	ENSSMAG00000010350	ptcd2	92	44.789	Scophthalmus_maximus
ENSDORG00000004921	Ptcd2	90	50.144	ENSSDUG00000008142	ptcd2	87	50.144	Seriola_dumerili
ENSDORG00000004921	Ptcd2	90	49.713	ENSSLDG00000015284	ptcd2	91	49.713	Seriola_lalandi_dorsalis
ENSDORG00000004921	Ptcd2	81	67.412	ENSSARG00000004983	PTCD2	99	67.412	Sorex_araneus
ENSDORG00000004921	Ptcd2	93	54.294	ENSSPUG00000000176	PTCD2	91	54.294	Sphenodon_punctatus
ENSDORG00000004921	Ptcd2	98	45.767	ENSSPAG00000008591	ptcd2	96	45.767	Stegastes_partitus
ENSDORG00000004921	Ptcd2	100	75.711	ENSSSCG00000016975	PTCD2	90	75.711	Sus_scrofa
ENSDORG00000004921	Ptcd2	89	50.725	ENSTGUG00000005705	PTCD2	99	50.725	Taeniopygia_guttata
ENSDORG00000004921	Ptcd2	100	74.419	ENSTBEG00000016559	PTCD2	99	74.419	Tupaia_belangeri
ENSDORG00000004921	Ptcd2	100	76.546	ENSTTRG00000011851	PTCD2	99	76.546	Tursiops_truncatus
ENSDORG00000004921	Ptcd2	100	76.744	ENSUAMG00000007583	PTCD2	90	76.744	Ursus_americanus
ENSDORG00000004921	Ptcd2	100	76.486	ENSUMAG00000007666	PTCD2	100	76.486	Ursus_maritimus
ENSDORG00000004921	Ptcd2	100	75.773	ENSVPAG00000009597	PTCD2	99	75.773	Vicugna_pacos
ENSDORG00000004921	Ptcd2	100	74.160	ENSVVUG00000007299	-	100	74.160	Vulpes_vulpes
ENSDORG00000004921	Ptcd2	91	52.975	ENSXETG00000031652	PTCD2	92	52.975	Xenopus_tropicalis
ENSDORG00000004921	Ptcd2	93	44.077	ENSXMAG00000005940	ptcd2	86	44.077	Xiphophorus_maculatus