EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004985 (Gene tree)
Gene ID: 105996861
Gene Symbol: Ddx39b
Alias: 0610030D10Rik|Bat-1|Bat1|Bat1a|D17H6S81E-1
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 33791 bases
Position: chrKN672484.1:311881-345671
Accession: 105996861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016320	ResIII	PF04851.15	7.4e-08	1	1
ENSDORP00000018675	ResIII	PF04851.15	8.1e-08	1	1
ENSDORP00000018675	DEAD	PF00270.29	4.5e-39	1	1
ENSDORP00000016320	DEAD	PF00270.29	7.7e-39	1	1
ENSDORP00000004664	DEAD	PF00270.29	5.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029024	-	1389	XM_013031105	ENSDORP00000018675	374 (aa)	XP_012886559	UPI000BAD048C
ENSDORT00000023958	-	1107	-	ENSDORP00000016320	368 (aa)	-	UPI000BAD123A
ENSDORT00000004987	-	1200	XM_013031099	ENSDORP00000004664	399 (aa)	XP_012886553	UPI000BAD20A5

Gene Model

Click here to download ENSDORG00000004985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004985	Ddx39b	82	35.548	ENSDORG00000001037	Ddx6	77	35.197
ENSDORG00000004985	Ddx39b	92	31.728	ENSDORG00000002078	Ddx19a	75	31.728
ENSDORG00000004985	Ddx39b	88	38.298	ENSDORG00000028348	-	90	38.298
ENSDORG00000004985	Ddx39b	92	32.011	ENSDORG00000004421	Ddx19b	72	32.011
ENSDORG00000004985	Ddx39b	94	36.080	ENSDORG00000014225	Eif4a1	96	31.486
ENSDORG00000004985	Ddx39b	88	36.170	ENSDORG00000024661	-	90	36.170
ENSDORG00000004985	Ddx39b	100	90.909	ENSDORG00000013041	Ddx39	87	91.176
ENSDORG00000004985	Ddx39b	84	30.675	ENSDORG00000001822	Ddx25	72	30.878
ENSDORG00000004985	Ddx39b	88	37.690	ENSDORG00000013028	-	89	33.244
ENSDORG00000004985	Ddx39b	86	31.307	ENSDORG00000007702	Ddx59	53	31.307
ENSDORG00000004985	Ddx39b	88	32.840	ENSDORG00000004301	Ddx49	74	32.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004985	Ddx39b	100	99.733	ENSG00000198563	DDX39B	100	99.654	Homo_sapiens
ENSDORG00000004985	Ddx39b	100	100.000	ENSAMEG00000009508	DDX39B	87	100.000	Ailuropoda_melanoleuca
ENSDORG00000004985	Ddx39b	100	93.651	ENSACIG00000004534	ddx39b	87	93.651	Amphilophus_citrinellus
ENSDORG00000004985	Ddx39b	100	93.651	ENSATEG00000012366	ddx39b	88	93.651	Anabas_testudineus
ENSDORG00000004985	Ddx39b	100	96.800	ENSACAG00000012240	DDX39B	87	96.800	Anolis_carolinensis
ENSDORG00000004985	Ddx39b	100	99.733	ENSANAG00000030372	DDX39B	87	99.733	Aotus_nancymaae
ENSDORG00000004985	Ddx39b	100	91.601	ENSACLG00000018759	ddx39b	87	91.601	Astatotilapia_calliptera
ENSDORG00000004985	Ddx39b	100	92.408	ENSAMXG00000017837	ddx39b	88	92.408	Astyanax_mexicanus
ENSDORG00000004985	Ddx39b	100	99.465	ENSBTAG00000014490	DDX39B	87	99.465	Bos_taurus
ENSDORG00000004985	Ddx39b	100	99.733	ENSCJAG00000003152	DDX39B	87	99.733	Callithrix_jacchus
ENSDORG00000004985	Ddx39b	100	99.733	ENSCAFG00000000509	DDX39B	95	97.270	Canis_familiaris
ENSDORG00000004985	Ddx39b	100	99.733	ENSCAFG00020020530	DDX39B	87	99.733	Canis_lupus_dingo
ENSDORG00000004985	Ddx39b	100	99.465	ENSCHIG00000004579	DDX39B	87	99.465	Capra_hircus
ENSDORG00000004985	Ddx39b	100	99.733	ENSTSYG00000010226	-	87	99.733	Carlito_syrichta
ENSDORG00000004985	Ddx39b	100	83.690	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSDORG00000004985	Ddx39b	100	99.465	ENSCAPG00000010066	DDX39B	87	99.465	Cavia_aperea
ENSDORG00000004985	Ddx39b	100	99.465	ENSCPOG00000002335	DDX39B	87	99.465	Cavia_porcellus
ENSDORG00000004985	Ddx39b	100	99.733	ENSCCAG00000027897	DDX39B	88	99.733	Cebus_capucinus
ENSDORG00000004985	Ddx39b	100	92.246	ENSCATG00000043709	DDX39B	88	92.246	Cercocebus_atys
ENSDORG00000004985	Ddx39b	100	99.465	ENSCLAG00000014555	DDX39B	87	99.465	Chinchilla_lanigera
ENSDORG00000004985	Ddx39b	100	99.733	ENSCSAG00000008517	DDX39B	88	99.733	Chlorocebus_sabaeus
ENSDORG00000004985	Ddx39b	68	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSDORG00000004985	Ddx39b	100	99.733	ENSCANG00000041217	DDX39B	87	99.733	Colobus_angolensis_palliatus
ENSDORG00000004985	Ddx39b	66	98.776	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSDORG00000004985	Ddx39b	89	78.932	ENSCGRG00001021916	-	77	84.918	Cricetulus_griseus_chok1gshd
ENSDORG00000004985	Ddx39b	55	98.049	ENSCGRG00000000078	-	90	98.049	Cricetulus_griseus_crigri
ENSDORG00000004985	Ddx39b	66	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSDORG00000004985	Ddx39b	100	92.126	ENSDARG00000036069	ddx39b	88	92.388	Danio_rerio
ENSDORG00000004985	Ddx39b	100	99.733	ENSDNOG00000010215	DDX39B	87	99.733	Dasypus_novemcinctus
ENSDORG00000004985	Ddx39b	100	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSDORG00000004985	Ddx39b	100	99.733	ENSEASG00005017156	DDX39B	87	99.733	Equus_asinus_asinus
ENSDORG00000004985	Ddx39b	100	99.733	ENSECAG00000007750	DDX39B	88	99.733	Equus_caballus
ENSDORG00000004985	Ddx39b	100	92.573	ENSELUG00000017904	ddx39b	87	92.573	Esox_lucius
ENSDORG00000004985	Ddx39b	100	100.000	ENSFCAG00000004497	DDX39B	87	100.000	Felis_catus
ENSDORG00000004985	Ddx39b	100	99.465	ENSFDAG00000011074	DDX39B	87	99.465	Fukomys_damarensis
ENSDORG00000004985	Ddx39b	71	99.618	ENSGAGG00000001300	-	74	97.611	Gopherus_agassizii
ENSDORG00000004985	Ddx39b	100	99.733	ENSGGOG00000005989	DDX39B	87	99.733	Gorilla_gorilla
ENSDORG00000004985	Ddx39b	55	87.560	ENSHBUG00000022054	-	77	87.560	Haplochromis_burtoni
ENSDORG00000004985	Ddx39b	100	98.930	ENSHGLG00000019248	DDX39B	87	98.930	Heterocephalus_glaber_female
ENSDORG00000004985	Ddx39b	100	98.930	ENSHGLG00100011850	DDX39B	87	98.930	Heterocephalus_glaber_male
ENSDORG00000004985	Ddx39b	100	91.361	ENSIPUG00000015733	DDX39B	83	91.885	Ictalurus_punctatus
ENSDORG00000004985	Ddx39b	100	99.198	ENSSTOG00000012838	DDX39B	87	99.198	Ictidomys_tridecemlineatus
ENSDORG00000004985	Ddx39b	100	98.930	ENSJJAG00000005660	-	87	98.930	Jaculus_jaculus
ENSDORG00000004985	Ddx39b	75	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSDORG00000004985	Ddx39b	100	78.342	ENSLBEG00000012254	ddx39b	87	78.342	Labrus_bergylta
ENSDORG00000004985	Ddx39b	100	88.158	ENSLACG00000002110	DDX39B	100	82.529	Latimeria_chalumnae
ENSDORG00000004985	Ddx39b	100	99.465	ENSLAFG00000014202	DDX39B	94	99.592	Loxodonta_africana
ENSDORG00000004985	Ddx39b	100	99.733	ENSMFAG00000034233	DDX39B	87	99.733	Macaca_fascicularis
ENSDORG00000004985	Ddx39b	100	99.733	ENSMMUG00000008839	DDX39B	87	99.733	Macaca_mulatta
ENSDORG00000004985	Ddx39b	100	99.733	ENSMNEG00000041059	DDX39B	87	99.733	Macaca_nemestrina
ENSDORG00000004985	Ddx39b	100	99.733	ENSMLEG00000043791	DDX39B	87	99.733	Mandrillus_leucophaeus
ENSDORG00000004985	Ddx39b	100	91.601	ENSMZEG00005017654	ddx39b	87	91.601	Maylandia_zebra
ENSDORG00000004985	Ddx39b	100	99.198	ENSMAUG00000008059	Ddx39b	87	99.198	Mesocricetus_auratus
ENSDORG00000004985	Ddx39b	100	99.733	ENSMICG00000017349	DDX39B	87	99.733	Microcebus_murinus
ENSDORG00000004985	Ddx39b	100	99.198	ENSMOCG00000011169	Ddx39b	87	99.198	Microtus_ochrogaster
ENSDORG00000004985	Ddx39b	100	99.733	ENSMODG00000015791	DDX39B	88	99.733	Monodelphis_domestica
ENSDORG00000004985	Ddx39b	100	99.198	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSDORG00000004985	Ddx39b	100	99.198	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSDORG00000004985	Ddx39b	100	99.198	MGP_SPRETEiJ_G0022424	Ddx39b	87	99.198	Mus_spretus
ENSDORG00000004985	Ddx39b	100	100.000	ENSMPUG00000011407	DDX39B	87	100.000	Mustela_putorius_furo
ENSDORG00000004985	Ddx39b	73	97.270	ENSMLUG00000001681	DDX39B	94	97.270	Myotis_lucifugus
ENSDORG00000004985	Ddx39b	100	99.733	ENSNGAG00000022948	Ddx39b	87	99.733	Nannospalax_galili
ENSDORG00000004985	Ddx39b	100	88.221	ENSNLEG00000006094	DDX39B	100	88.221	Nomascus_leucogenys
ENSDORG00000004985	Ddx39b	83	100.000	ENSMEUG00000008264	DDX39B	75	100.000	Notamacropus_eugenii
ENSDORG00000004985	Ddx39b	100	100.000	ENSOPRG00000011923	DDX39B	87	100.000	Ochotona_princeps
ENSDORG00000004985	Ddx39b	100	99.198	ENSODEG00000018083	DDX39B	87	99.198	Octodon_degus
ENSDORG00000004985	Ddx39b	100	92.328	ENSONIG00000004740	ddx39b	88	92.328	Oreochromis_niloticus
ENSDORG00000004985	Ddx39b	63	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSDORG00000004985	Ddx39b	100	95.887	ENSOCUG00000024126	DDX39B	88	95.887	Oryctolagus_cuniculus
ENSDORG00000004985	Ddx39b	83	90.312	ENSOGAG00000009067	-	97	89.524	Otolemur_garnettii
ENSDORG00000004985	Ddx39b	100	98.933	ENSOGAG00000028850	-	87	98.933	Otolemur_garnettii
ENSDORG00000004985	Ddx39b	100	99.465	ENSOARG00000008787	DDX39B	86	99.465	Ovis_aries
ENSDORG00000004985	Ddx39b	100	99.733	ENSPPAG00000043072	DDX39B	87	99.733	Pan_paniscus
ENSDORG00000004985	Ddx39b	100	100.000	ENSPPRG00000001913	DDX39B	87	100.000	Panthera_pardus
ENSDORG00000004985	Ddx39b	100	98.930	ENSPTIG00000017669	DDX39B	87	98.930	Panthera_tigris_altaica
ENSDORG00000004985	Ddx39b	100	99.733	ENSPTRG00000032509	DDX39B	87	99.733	Pan_troglodytes
ENSDORG00000004985	Ddx39b	100	99.733	ENSPANG00000018609	DDX39B	87	99.733	Papio_anubis
ENSDORG00000004985	Ddx39b	100	90.601	ENSPKIG00000011324	ddx39b	88	91.123	Paramormyrops_kingsleyae
ENSDORG00000004985	Ddx39b	100	98.930	ENSPEMG00000016905	Ddx39b	87	98.930	Peromyscus_maniculatus_bairdii
ENSDORG00000004985	Ddx39b	100	99.733	ENSPCIG00000017572	DDX39B	87	99.733	Phascolarctos_cinereus
ENSDORG00000004985	Ddx39b	100	99.733	ENSPPYG00000016433	DDX39B	87	99.733	Pongo_abelii
ENSDORG00000004985	Ddx39b	71	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSDORG00000004985	Ddx39b	100	99.733	ENSPCOG00000018656	DDX39B	92	99.733	Propithecus_coquereli
ENSDORG00000004985	Ddx39b	100	99.198	ENSPVAG00000004653	DDX39B	87	99.198	Pteropus_vampyrus
ENSDORG00000004985	Ddx39b	100	81.746	ENSPNYG00000010382	ddx39b	86	81.746	Pundamilia_nyererei
ENSDORG00000004985	Ddx39b	100	92.147	ENSPNAG00000026926	ddx39b	88	92.147	Pygocentrus_nattereri
ENSDORG00000004985	Ddx39b	100	99.198	ENSRNOG00000000841	Ddx39b	94	99.198	Rattus_norvegicus
ENSDORG00000004985	Ddx39b	100	87.968	ENSRBIG00000031309	DDX39B	77	99.592	Rhinopithecus_bieti
ENSDORG00000004985	Ddx39b	100	99.733	ENSRROG00000039517	DDX39B	94	99.733	Rhinopithecus_roxellana
ENSDORG00000004985	Ddx39b	100	87.968	ENSSBOG00000035513	-	77	99.592	Saimiri_boliviensis_boliviensis
ENSDORG00000004985	Ddx39b	100	99.733	ENSSHAG00000003209	DDX39B	87	99.733	Sarcophilus_harrisii
ENSDORG00000004985	Ddx39b	100	90.601	ENSSFOG00015016107	ddx39b	88	91.384	Scleropages_formosus
ENSDORG00000004985	Ddx39b	100	93.915	ENSSDUG00000011557	ddx39b	88	94.180	Seriola_dumerili
ENSDORG00000004985	Ddx39b	100	93.915	ENSSLDG00000015763	ddx39b	88	94.180	Seriola_lalandi_dorsalis
ENSDORG00000004985	Ddx39b	100	87.968	ENSSARG00000005245	DDX39B	100	87.968	Sorex_araneus
ENSDORG00000004985	Ddx39b	100	97.594	ENSSPUG00000012805	DDX39B	87	97.594	Sphenodon_punctatus
ENSDORG00000004985	Ddx39b	100	99.733	ENSSSCG00000001400	DDX39B	84	100.000	Sus_scrofa
ENSDORG00000004985	Ddx39b	100	73.262	ENSTBEG00000003721	DDX39B	100	68.056	Tupaia_belangeri
ENSDORG00000004985	Ddx39b	100	89.974	ENSTTRG00000014074	DDX39B	88	89.974	Tursiops_truncatus
ENSDORG00000004985	Ddx39b	100	85.372	ENSUAMG00000027335	DDX39B	87	85.372	Ursus_americanus
ENSDORG00000004985	Ddx39b	100	89.840	ENSUMAG00000015124	DDX39B	94	88.780	Ursus_maritimus
ENSDORG00000004985	Ddx39b	70	99.115	ENSVPAG00000009167	-	74	99.115	Vicugna_pacos
ENSDORG00000004985	Ddx39b	100	99.733	ENSVVUG00000019518	DDX39B	86	99.733	Vulpes_vulpes
ENSDORG00000004985	Ddx39b	100	81.915	ENSXETG00000002498	ddx39b	99	69.977	Xenopus_tropicalis