EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005159 (Gene tree)
Gene ID: 105982595
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 34137 bases
Position: chrKN672362.1:18755054-18789190
Accession: 105982595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000004825	SRP54	PF00448.22	1.1e-64	1	1
ENSDORP00000004825	SRP54_N	PF02881.19	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005157	-	1311	XM_013012241	ENSDORP00000004825	436 (aa)	XP_012867695	UPI000BAD107D

Gene Model

Click here to download ENSDORG00000005159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005159	-	97	85.045	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSDORG00000005159	-	98	80.531	ENSAPOG00000011314	srp54	89	80.531	Acanthochromis_polyacanthus
ENSDORG00000005159	-	97	85.045	ENSAMEG00000015544	SRP54	89	85.045	Ailuropoda_melanoleuca
ENSDORG00000005159	-	96	81.982	ENSACIG00000022831	srp54	96	81.982	Amphilophus_citrinellus
ENSDORG00000005159	-	98	80.531	ENSAOCG00000019401	srp54	89	80.531	Amphiprion_ocellaris
ENSDORG00000005159	-	98	80.531	ENSAPEG00000001977	srp54	89	80.531	Amphiprion_percula
ENSDORG00000005159	-	98	80.973	ENSATEG00000013877	srp54	89	80.973	Anabas_testudineus
ENSDORG00000005159	-	98	84.513	ENSAPLG00000010125	SRP54	90	84.513	Anas_platyrhynchos
ENSDORG00000005159	-	60	68.953	ENSACAG00000001124	-	83	68.953	Anolis_carolinensis
ENSDORG00000005159	-	74	86.905	ENSACAG00000010631	-	77	86.905	Anolis_carolinensis
ENSDORG00000005159	-	98	84.071	ENSACAG00000002103	-	89	84.071	Anolis_carolinensis
ENSDORG00000005159	-	97	85.045	ENSANAG00000022133	SRP54	87	91.304	Aotus_nancymaae
ENSDORG00000005159	-	98	80.752	ENSACLG00000015866	srp54	89	80.752	Astatotilapia_calliptera
ENSDORG00000005159	-	98	80.973	ENSAMXG00000032669	SRP54	89	80.973	Astyanax_mexicanus
ENSDORG00000005159	-	97	85.045	ENSBTAG00000019085	SRP54	89	85.045	Bos_taurus
ENSDORG00000005159	-	96	62.697	WBGene00009012	F21D5.7	90	62.697	Caenorhabditis_elegans
ENSDORG00000005159	-	97	85.045	ENSCJAG00000006581	SRP54	87	91.304	Callithrix_jacchus
ENSDORG00000005159	-	97	85.045	ENSCAFG00000013331	SRP54	89	85.045	Canis_familiaris
ENSDORG00000005159	-	97	85.045	ENSCAFG00020023427	SRP54	89	85.045	Canis_lupus_dingo
ENSDORG00000005159	-	97	85.045	ENSCHIG00000026345	SRP54	89	85.045	Capra_hircus
ENSDORG00000005159	-	97	76.126	ENSTSYG00000035333	-	88	76.126	Carlito_syrichta
ENSDORG00000005159	-	97	85.268	ENSTSYG00000002680	-	89	85.268	Carlito_syrichta
ENSDORG00000005159	-	83	62.791	ENSCAPG00000008780	SRP54	85	62.791	Cavia_aperea
ENSDORG00000005159	-	97	84.598	ENSCPOG00000003691	SRP54	89	84.598	Cavia_porcellus
ENSDORG00000005159	-	97	74.483	ENSCCAG00000024179	SRP54	78	88.450	Cebus_capucinus
ENSDORG00000005159	-	97	85.045	ENSCATG00000034083	SRP54	87	91.304	Cercocebus_atys
ENSDORG00000005159	-	97	85.045	ENSCLAG00000015076	SRP54	89	85.045	Chinchilla_lanigera
ENSDORG00000005159	-	97	85.045	ENSCSAG00000015575	SRP54	89	85.045	Chlorocebus_sabaeus
ENSDORG00000005159	-	97	74.099	ENSCHOG00000008986	SRP54	93	74.099	Choloepus_hoffmanni
ENSDORG00000005159	-	98	84.292	ENSCPBG00000026195	SRP54	89	84.292	Chrysemys_picta_bellii
ENSDORG00000005159	-	96	73.077	ENSCING00000007380	-	88	73.077	Ciona_intestinalis
ENSDORG00000005159	-	97	85.045	ENSCANG00000028532	SRP54	87	91.304	Colobus_angolensis_palliatus
ENSDORG00000005159	-	97	85.045	ENSCGRG00001009525	-	89	85.045	Cricetulus_griseus_chok1gshd
ENSDORG00000005159	-	78	90.085	ENSCGRG00000009453	-	81	90.085	Cricetulus_griseus_crigri
ENSDORG00000005159	-	98	80.088	ENSCSEG00000012392	srp54	89	80.088	Cynoglossus_semilaevis
ENSDORG00000005159	-	98	80.531	ENSCVAG00000010395	srp54	89	80.531	Cyprinodon_variegatus
ENSDORG00000005159	-	98	80.752	ENSDARG00000098367	srp54	89	80.752	Danio_rerio
ENSDORG00000005159	-	97	85.045	ENSDNOG00000032525	SRP54	89	85.045	Dasypus_novemcinctus
ENSDORG00000005159	-	98	68.514	FBgn0010747	Srp54k	89	69.027	Drosophila_melanogaster
ENSDORG00000005159	-	97	84.152	ENSETEG00000016307	-	89	84.152	Echinops_telfairi
ENSDORG00000005159	-	72	49.842	ENSETEG00000012102	-	75	49.842	Echinops_telfairi
ENSDORG00000005159	-	98	76.159	ENSEBUG00000009437	-	90	76.159	Eptatretus_burgeri
ENSDORG00000005159	-	97	85.045	ENSEASG00005002057	SRP54	89	85.045	Equus_asinus_asinus
ENSDORG00000005159	-	97	85.045	ENSECAG00000018042	SRP54	88	85.045	Equus_caballus
ENSDORG00000005159	-	97	66.741	ENSEEUG00000001511	SRP54	89	66.741	Erinaceus_europaeus
ENSDORG00000005159	-	98	79.867	ENSELUG00000003395	srp54	89	79.867	Esox_lucius
ENSDORG00000005159	-	97	85.268	ENSFCAG00000032033	SRP54	89	85.268	Felis_catus
ENSDORG00000005159	-	98	84.513	ENSFALG00000005995	SRP54	89	84.513	Ficedula_albicollis
ENSDORG00000005159	-	97	85.045	ENSFDAG00000016767	SRP54	90	85.045	Fukomys_damarensis
ENSDORG00000005159	-	98	80.310	ENSFHEG00000004263	srp54	96	75.388	Fundulus_heteroclitus
ENSDORG00000005159	-	92	73.239	ENSGMOG00000011391	srp54	89	73.239	Gadus_morhua
ENSDORG00000005159	-	98	84.513	ENSGALG00000023135	SRP54	89	84.513	Gallus_gallus
ENSDORG00000005159	-	98	80.752	ENSGAFG00000011586	srp54	89	80.752	Gambusia_affinis
ENSDORG00000005159	-	98	80.088	ENSGACG00000004181	srp54	100	81.499	Gasterosteus_aculeatus
ENSDORG00000005159	-	98	84.292	ENSGAGG00000014766	SRP54	89	84.292	Gopherus_agassizii
ENSDORG00000005159	-	97	85.045	ENSGGOG00000002926	SRP54	87	91.304	Gorilla_gorilla
ENSDORG00000005159	-	98	80.752	ENSHBUG00000005678	srp54	89	80.752	Haplochromis_burtoni
ENSDORG00000005159	-	97	85.045	ENSHGLG00000002850	SRP54	89	85.045	Heterocephalus_glaber_female
ENSDORG00000005159	-	97	85.045	ENSHGLG00100005263	SRP54	89	85.045	Heterocephalus_glaber_male
ENSDORG00000005159	-	97	56.208	ENSHGLG00100007281	-	88	56.208	Heterocephalus_glaber_male
ENSDORG00000005159	-	98	79.425	ENSHCOG00000021127	srp54	89	79.425	Hippocampus_comes
ENSDORG00000005159	-	98	80.531	ENSIPUG00000001420	srp54	89	80.531	Ictalurus_punctatus
ENSDORG00000005159	-	97	85.045	ENSSTOG00000016023	SRP54	89	85.045	Ictidomys_tridecemlineatus
ENSDORG00000005159	-	97	82.569	ENSJJAG00000013417	-	88	82.569	Jaculus_jaculus
ENSDORG00000005159	-	82	61.725	ENSJJAG00000016404	-	84	61.725	Jaculus_jaculus
ENSDORG00000005159	-	98	80.088	ENSKMAG00000007707	srp54	89	80.088	Kryptolebias_marmoratus
ENSDORG00000005159	-	98	80.531	ENSLBEG00000021122	srp54	89	80.531	Labrus_bergylta
ENSDORG00000005159	-	98	80.531	ENSLBEG00000018690	srp54	89	80.531	Labrus_bergylta
ENSDORG00000005159	-	98	81.637	ENSLACG00000017890	SRP54	89	81.637	Latimeria_chalumnae
ENSDORG00000005159	-	98	81.637	ENSLOCG00000009440	srp54	89	81.637	Lepisosteus_oculatus
ENSDORG00000005159	-	97	85.045	ENSLAFG00000012007	SRP54	89	85.045	Loxodonta_africana
ENSDORG00000005159	-	97	85.045	ENSMFAG00000044371	SRP54	87	91.304	Macaca_fascicularis
ENSDORG00000005159	-	97	85.045	ENSMMUG00000015073	FAM177A1	87	91.304	Macaca_mulatta
ENSDORG00000005159	-	97	85.045	ENSMNEG00000006947	SRP54	87	91.304	Macaca_nemestrina
ENSDORG00000005159	-	97	85.045	ENSMLEG00000042251	SRP54	87	91.304	Mandrillus_leucophaeus
ENSDORG00000005159	-	98	80.752	ENSMAMG00000004803	srp54	89	80.752	Mastacembelus_armatus
ENSDORG00000005159	-	98	80.752	ENSMZEG00005027528	srp54	89	80.752	Maylandia_zebra
ENSDORG00000005159	-	98	79.295	ENSMGAG00000012481	SRP54	90	79.295	Meleagris_gallopavo
ENSDORG00000005159	-	97	84.821	ENSMAUG00000014447	-	89	84.821	Mesocricetus_auratus
ENSDORG00000005159	-	97	85.045	ENSMICG00000010270	SRP54	89	85.045	Microcebus_murinus
ENSDORG00000005159	-	82	82.292	ENSMOCG00000000948	-	87	82.292	Microtus_ochrogaster
ENSDORG00000005159	-	97	79.911	ENSMMOG00000020303	srp54	98	79.911	Mola_mola
ENSDORG00000005159	-	97	85.045	ENSMODG00000023150	-	89	85.045	Monodelphis_domestica
ENSDORG00000005159	-	97	85.045	ENSMODG00000012925	-	89	85.045	Monodelphis_domestica
ENSDORG00000005159	-	97	81.027	ENSMALG00000009163	srp54	99	81.027	Monopterus_albus
ENSDORG00000005159	-	97	84.821	MGP_CAROLIEiJ_G0017754	-	89	84.821	Mus_caroli
ENSDORG00000005159	-	97	84.821	ENSMUSG00000112449	Srp54b	87	100.000	Mus_musculus
ENSDORG00000005159	-	97	84.821	ENSMUSG00000073079	Srp54a	87	100.000	Mus_musculus
ENSDORG00000005159	-	97	83.929	ENSMUSG00000079108	Srp54c	89	83.929	Mus_musculus
ENSDORG00000005159	-	97	84.821	MGP_PahariEiJ_G0029510	-	89	84.821	Mus_pahari
ENSDORG00000005159	-	97	85.045	ENSMPUG00000016302	SRP54	89	85.045	Mustela_putorius_furo
ENSDORG00000005159	-	97	85.235	ENSMLUG00000008958	SRP54	89	85.235	Myotis_lucifugus
ENSDORG00000005159	-	97	73.884	ENSNGAG00000019806	-	87	73.884	Nannospalax_galili
ENSDORG00000005159	-	83	77.835	ENSNBRG00000006000	srp54	88	77.835	Neolamprologus_brichardi
ENSDORG00000005159	-	97	85.045	ENSNLEG00000003496	SRP54	87	91.304	Nomascus_leucogenys
ENSDORG00000005159	-	74	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSDORG00000005159	-	97	85.045	ENSODEG00000004865	SRP54	89	85.045	Octodon_degus
ENSDORG00000005159	-	98	80.752	ENSONIG00000011768	srp54	89	80.752	Oreochromis_niloticus
ENSDORG00000005159	-	97	85.045	ENSOANG00000014051	SRP54	89	85.045	Ornithorhynchus_anatinus
ENSDORG00000005159	-	97	84.667	ENSOCUG00000007838	SRP54	89	84.667	Oryctolagus_cuniculus
ENSDORG00000005159	-	98	80.531	ENSORLG00000010027	srp54	89	80.531	Oryzias_latipes
ENSDORG00000005159	-	98	80.531	ENSORLG00020001878	srp54	89	80.531	Oryzias_latipes_hni
ENSDORG00000005159	-	98	80.531	ENSORLG00015021866	srp54	89	80.531	Oryzias_latipes_hsok
ENSDORG00000005159	-	98	80.752	ENSOMEG00000020952	srp54	89	80.752	Oryzias_melastigma
ENSDORG00000005159	-	97	85.045	ENSOGAG00000012188	SRP54	89	85.045	Otolemur_garnettii
ENSDORG00000005159	-	97	85.045	ENSOARG00000007160	SRP54	89	85.045	Ovis_aries
ENSDORG00000005159	-	97	85.045	ENSPPAG00000017434	SRP54	87	91.304	Pan_paniscus
ENSDORG00000005159	-	97	84.152	ENSPPRG00000014047	SRP54	77	100.000	Panthera_pardus
ENSDORG00000005159	-	97	85.268	ENSPTIG00000000744	SRP54	85	85.268	Panthera_tigris_altaica
ENSDORG00000005159	-	97	85.045	ENSPTRG00000006259	FAM177A1	87	91.304	Pan_troglodytes
ENSDORG00000005159	-	97	85.045	ENSPANG00000023853	SRP54	87	91.304	Papio_anubis
ENSDORG00000005159	-	98	80.531	ENSPKIG00000001953	srp54	89	80.531	Paramormyrops_kingsleyae
ENSDORG00000005159	-	98	84.292	ENSPSIG00000006476	SRP54	89	84.292	Pelodiscus_sinensis
ENSDORG00000005159	-	99	79.610	ENSPMGG00000004127	srp54	99	79.610	Periophthalmus_magnuspinnatus
ENSDORG00000005159	-	96	81.944	ENSPEMG00000019634	-	93	80.510	Peromyscus_maniculatus_bairdii
ENSDORG00000005159	-	98	77.042	ENSPMAG00000006078	-	90	77.042	Petromyzon_marinus
ENSDORG00000005159	-	97	85.045	ENSPCIG00000016175	SRP54	89	85.045	Phascolarctos_cinereus
ENSDORG00000005159	-	98	80.752	ENSPFOG00000008870	srp54	89	80.752	Poecilia_formosa
ENSDORG00000005159	-	98	80.752	ENSPLAG00000009889	srp54	89	80.752	Poecilia_latipinna
ENSDORG00000005159	-	98	80.752	ENSPMEG00000008601	srp54	89	80.752	Poecilia_mexicana
ENSDORG00000005159	-	98	80.752	ENSPREG00000004505	srp54	89	80.752	Poecilia_reticulata
ENSDORG00000005159	-	97	79.241	ENSPPYG00000005739	SRP54	89	79.241	Pongo_abelii
ENSDORG00000005159	-	97	80.580	ENSPCAG00000006268	SRP54	89	80.580	Procavia_capensis
ENSDORG00000005159	-	97	85.202	ENSPCOG00000022473	SRP54	89	85.202	Propithecus_coquereli
ENSDORG00000005159	-	64	98.837	ENSPVAG00000010056	SRP54	72	98.837	Pteropus_vampyrus
ENSDORG00000005159	-	98	80.752	ENSPNYG00000009717	srp54	89	80.752	Pundamilia_nyererei
ENSDORG00000005159	-	98	80.752	ENSPNAG00000008544	srp54	89	80.752	Pygocentrus_nattereri
ENSDORG00000005159	-	97	85.045	ENSRNOG00000032776	Srp54a	89	85.045	Rattus_norvegicus
ENSDORG00000005159	-	97	85.045	ENSRROG00000041292	SRP54	87	91.304	Rhinopithecus_roxellana
ENSDORG00000005159	-	93	45.495	YPR088C	SRP54	81	45.495	Saccharomyces_cerevisiae
ENSDORG00000005159	-	92	83.333	ENSSBOG00000035145	SRP54	88	83.971	Saimiri_boliviensis_boliviensis
ENSDORG00000005159	-	63	87.456	ENSSHAG00000000671	SRP54	83	87.456	Sarcophilus_harrisii
ENSDORG00000005159	-	98	80.973	ENSSFOG00015013920	srp54	89	80.973	Scleropages_formosus
ENSDORG00000005159	-	98	80.088	ENSSMAG00000002441	srp54	84	80.088	Scophthalmus_maximus
ENSDORG00000005159	-	98	80.973	ENSSDUG00000018586	srp54	89	80.973	Seriola_dumerili
ENSDORG00000005159	-	98	80.752	ENSSLDG00000010476	srp54	89	80.752	Seriola_lalandi_dorsalis
ENSDORG00000005159	-	97	85.045	ENSSARG00000002744	SRP54	89	85.045	Sorex_araneus
ENSDORG00000005159	-	98	84.292	ENSSPUG00000013101	SRP54	89	84.292	Sphenodon_punctatus
ENSDORG00000005159	-	98	80.531	ENSSPAG00000002354	srp54	89	80.531	Stegastes_partitus
ENSDORG00000005159	-	97	85.045	ENSSSCG00000001955	SRP54	89	85.045	Sus_scrofa
ENSDORG00000005159	-	98	84.513	ENSTGUG00000011945	-	90	84.513	Taeniopygia_guttata
ENSDORG00000005159	-	98	80.310	ENSTRUG00000007057	srp54	89	80.310	Takifugu_rubripes
ENSDORG00000005159	-	98	80.088	ENSTNIG00000002589	srp54	89	80.088	Tetraodon_nigroviridis
ENSDORG00000005159	-	84	80.769	ENSTBEG00000011409	SRP54	87	80.769	Tupaia_belangeri
ENSDORG00000005159	-	97	73.884	ENSTTRG00000000928	SRP54	89	73.884	Tursiops_truncatus
ENSDORG00000005159	-	57	87.786	ENSUAMG00000012385	SRP54	100	87.786	Ursus_americanus
ENSDORG00000005159	-	97	85.045	ENSUMAG00000011234	SRP54	89	85.045	Ursus_maritimus
ENSDORG00000005159	-	97	85.011	ENSVPAG00000005668	SRP54	94	85.011	Vicugna_pacos
ENSDORG00000005159	-	97	85.045	ENSVVUG00000019962	SRP54	89	85.045	Vulpes_vulpes
ENSDORG00000005159	-	98	66.154	ENSXETG00000012290	srp54	90	66.304	Xenopus_tropicalis
ENSDORG00000005159	-	96	81.757	ENSXCOG00000004658	srp54	96	81.757	Xiphophorus_couchianus
ENSDORG00000005159	-	98	80.752	ENSXMAG00000018315	srp54	89	80.752	Xiphophorus_maculatus