EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000005234 (Gene tree)
Gene ID: 105986383
Gene Symbol: Parp1
Alias: 5830444G22Rik|Adprp|Adprt1|PARP|parp-1|sPARP-1
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 52425 bases
Position: chrKN672381.1:303861-356285
Accession: 105986383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021834	PARP	PF00644.20	1.2e-73	1	1
ENSDORP00000004897	PARP	PF00644.20	1.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005235	-	3003	-	ENSDORP00000004897	1000 (aa)	-	UPI000BACF9BE
ENSDORT00000023525	-	3340	XM_013017277	ENSDORP00000021834	972 (aa)	XP_012872731	UPI000BAD219C

Gene Model

Click here to download ENSDORG00000005234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000005234	Parp1	51	42.549	ENSDORG00000002521	Parp2	93	42.549

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005234	Parp1	100	90.862	ENSG00000143799	PARP1	99	90.862	Homo_sapiens
ENSDORG00000005234	Parp1	100	68.846	ENSAPOG00000006414	parp1	96	68.131	Acanthochromis_polyacanthus
ENSDORG00000005234	Parp1	100	88.843	ENSAMEG00000014451	PARP1	99	88.843	Ailuropoda_melanoleuca
ENSDORG00000005234	Parp1	100	68.168	ENSACIG00000005651	parp1	99	67.831	Amphilophus_citrinellus
ENSDORG00000005234	Parp1	100	69.152	ENSAOCG00000021005	parp1	96	68.641	Amphiprion_ocellaris
ENSDORG00000005234	Parp1	100	69.152	ENSAPEG00000004784	parp1	96	68.539	Amphiprion_percula
ENSDORG00000005234	Parp1	100	68.641	ENSATEG00000010457	parp1	96	67.620	Anabas_testudineus
ENSDORG00000005234	Parp1	90	78.840	ENSAPLG00000014039	PARP1	100	78.043	Anas_platyrhynchos
ENSDORG00000005234	Parp1	100	75.051	ENSACAG00000006189	PARP1	99	74.820	Anolis_carolinensis
ENSDORG00000005234	Parp1	100	90.442	ENSANAG00000032699	PARP1	99	90.442	Aotus_nancymaae
ENSDORG00000005234	Parp1	100	69.365	ENSACLG00000015489	parp1	99	69.239	Astatotilapia_calliptera
ENSDORG00000005234	Parp1	100	67.276	ENSAMXG00000006465	parp1	99	67.378	Astyanax_mexicanus
ENSDORG00000005234	Parp1	100	86.578	ENSBTAG00000000837	PARP1	99	86.578	Bos_taurus
ENSDORG00000005234	Parp1	83	43.426	WBGene00004049	parp-1	100	45.594	Caenorhabditis_elegans
ENSDORG00000005234	Parp1	100	90.956	ENSCJAG00000012831	PARP1	99	90.956	Callithrix_jacchus
ENSDORG00000005234	Parp1	99	89.403	ENSCAFG00000016089	PARP1	100	89.403	Canis_familiaris
ENSDORG00000005234	Parp1	100	89.322	ENSCAFG00020001660	PARP1	99	89.322	Canis_lupus_dingo
ENSDORG00000005234	Parp1	100	86.680	ENSCHIG00000018072	PARP1	99	86.680	Capra_hircus
ENSDORG00000005234	Parp1	94	91.295	ENSTSYG00000003699	PARP1	100	91.186	Carlito_syrichta
ENSDORG00000005234	Parp1	100	75.975	ENSCAPG00000011113	-	99	74.204	Cavia_aperea
ENSDORG00000005234	Parp1	100	90.246	ENSCPOG00000015643	-	99	89.723	Cavia_porcellus
ENSDORG00000005234	Parp1	100	90.750	ENSCCAG00000033484	PARP1	99	90.750	Cebus_capucinus
ENSDORG00000005234	Parp1	100	90.554	ENSCATG00000038981	PARP1	99	90.554	Cercocebus_atys
ENSDORG00000005234	Parp1	100	90.041	ENSCLAG00000006637	PARP1	99	90.041	Chinchilla_lanigera
ENSDORG00000005234	Parp1	64	96.094	ENSCHOG00000003539	PARP1	64	96.094	Choloepus_hoffmanni
ENSDORG00000005234	Parp1	100	77.766	ENSCPBG00000011958	PARP1	99	77.561	Chrysemys_picta_bellii
ENSDORG00000005234	Parp1	100	90.452	ENSCANG00000041340	PARP1	100	90.452	Colobus_angolensis_palliatus
ENSDORG00000005234	Parp1	100	89.938	ENSCGRG00001020559	Parp1	99	89.938	Cricetulus_griseus_chok1gshd
ENSDORG00000005234	Parp1	100	89.938	ENSCGRG00000004864	Parp1	100	89.938	Cricetulus_griseus_crigri
ENSDORG00000005234	Parp1	100	68.878	ENSCSEG00000020665	parp1	99	76.518	Cynoglossus_semilaevis
ENSDORG00000005234	Parp1	100	68.673	ENSCVAG00000021372	parp1	99	68.469	Cyprinodon_variegatus
ENSDORG00000005234	Parp1	100	68.260	ENSDARG00000019529	parp1	98	67.300	Danio_rerio
ENSDORG00000005234	Parp1	99	88.671	ENSDNOG00000012059	PARP1	100	88.671	Dasypus_novemcinctus
ENSDORG00000005234	Parp1	99	41.117	FBgn0010247	Parp	98	40.339	Drosophila_melanogaster
ENSDORG00000005234	Parp1	87	96.094	ENSETEG00000013254	PARP1	87	96.094	Echinops_telfairi
ENSDORG00000005234	Parp1	100	56.670	ENSEBUG00000005820	parp1	100	56.482	Eptatretus_burgeri
ENSDORG00000005234	Parp1	98	90.900	ENSEASG00005013275	PARP1	98	90.805	Equus_asinus_asinus
ENSDORG00000005234	Parp1	100	91.068	ENSECAG00000019207	PARP1	99	91.068	Equus_caballus
ENSDORG00000005234	Parp1	100	84.135	ENSEEUG00000012253	PARP1	99	84.135	Erinaceus_europaeus
ENSDORG00000005234	Parp1	100	68.004	ENSELUG00000017336	parp1	98	69.588	Esox_lucius
ENSDORG00000005234	Parp1	100	87.975	ENSFCAG00000005777	PARP1	99	87.975	Felis_catus
ENSDORG00000005234	Parp1	100	76.205	ENSFALG00000011578	PARP1	100	76.615	Ficedula_albicollis
ENSDORG00000005234	Parp1	100	88.912	ENSFDAG00000017662	PARP1	100	88.912	Fukomys_damarensis
ENSDORG00000005234	Parp1	100	68.163	ENSFHEG00000001117	parp1	99	67.755	Fundulus_heteroclitus
ENSDORG00000005234	Parp1	100	67.963	ENSGMOG00000014929	parp1	99	67.758	Gadus_morhua
ENSDORG00000005234	Parp1	100	77.231	ENSGALG00000009228	PARP1	99	77.641	Gallus_gallus
ENSDORG00000005234	Parp1	100	68.469	ENSGAFG00000010450	parp1	99	68.061	Gambusia_affinis
ENSDORG00000005234	Parp1	100	67.719	ENSGACG00000011280	parp1	96	67.108	Gasterosteus_aculeatus
ENSDORG00000005234	Parp1	100	76.821	ENSGAGG00000010066	PARP1	99	76.000	Gopherus_agassizii
ENSDORG00000005234	Parp1	100	90.862	ENSGGOG00000006308	PARP1	99	90.862	Gorilla_gorilla
ENSDORG00000005234	Parp1	100	69.459	ENSHBUG00000010490	parp1	98	67.868	Haplochromis_burtoni
ENSDORG00000005234	Parp1	100	88.912	ENSHGLG00000003992	PARP1	93	88.398	Heterocephalus_glaber_female
ENSDORG00000005234	Parp1	100	88.912	ENSHGLG00100016965	PARP1	93	88.398	Heterocephalus_glaber_male
ENSDORG00000005234	Parp1	100	67.276	ENSHCOG00000011619	parp1	99	66.870	Hippocampus_comes
ENSDORG00000005234	Parp1	100	67.004	ENSIPUG00000020250	parp1	99	66.802	Ictalurus_punctatus
ENSDORG00000005234	Parp1	100	90.760	ENSSTOG00000016000	PARP1	99	90.760	Ictidomys_tridecemlineatus
ENSDORG00000005234	Parp1	100	88.410	ENSJJAG00000023497	Parp1	99	88.410	Jaculus_jaculus
ENSDORG00000005234	Parp1	100	68.980	ENSKMAG00000011627	parp1	99	68.571	Kryptolebias_marmoratus
ENSDORG00000005234	Parp1	100	69.018	ENSLBEG00000013376	parp1	99	68.303	Labrus_bergylta
ENSDORG00000005234	Parp1	100	57.449	ENSLACG00000002735	PARP1	99	57.755	Latimeria_chalumnae
ENSDORG00000005234	Parp1	100	69.371	ENSLOCG00000015798	parp1	96	70.256	Lepisosteus_oculatus
ENSDORG00000005234	Parp1	100	86.961	ENSLAFG00000007830	PARP1	100	86.961	Loxodonta_africana
ENSDORG00000005234	Parp1	100	90.452	ENSMFAG00000002526	PARP1	99	90.452	Macaca_fascicularis
ENSDORG00000005234	Parp1	100	90.554	ENSMMUG00000021820	PARP1	99	90.554	Macaca_mulatta
ENSDORG00000005234	Parp1	100	90.554	ENSMNEG00000034074	PARP1	99	90.554	Macaca_nemestrina
ENSDORG00000005234	Parp1	100	88.434	ENSMLEG00000012344	PARP1	99	88.434	Mandrillus_leucophaeus
ENSDORG00000005234	Parp1	100	69.641	ENSMAMG00000020652	parp1	99	69.018	Mastacembelus_armatus
ENSDORG00000005234	Parp1	100	69.663	ENSMZEG00005016907	parp1	98	68.068	Maylandia_zebra
ENSDORG00000005234	Parp1	100	77.049	ENSMGAG00000007760	PARP1	100	77.436	Meleagris_gallopavo
ENSDORG00000005234	Parp1	100	89.836	ENSMAUG00000008306	Parp1	99	89.836	Mesocricetus_auratus
ENSDORG00000005234	Parp1	100	86.448	ENSMICG00000017076	PARP1	99	86.448	Microcebus_murinus
ENSDORG00000005234	Parp1	100	88.900	ENSMOCG00000014315	Parp1	99	89.220	Microtus_ochrogaster
ENSDORG00000005234	Parp1	100	67.762	ENSMMOG00000015966	parp1	99	67.659	Mola_mola
ENSDORG00000005234	Parp1	100	80.923	ENSMODG00000006076	PARP1	98	80.302	Monodelphis_domestica
ENSDORG00000005234	Parp1	100	67.518	ENSMALG00000004057	parp1	96	66.803	Monopterus_albus
ENSDORG00000005234	Parp1	100	88.718	MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	Mus_caroli
ENSDORG00000005234	Parp1	100	88.718	ENSMUSG00000026496	Parp1	99	93.878	Mus_musculus
ENSDORG00000005234	Parp1	100	88.718	MGP_SPRETEiJ_G0015777	Parp1	100	93.878	Mus_spretus
ENSDORG00000005234	Parp1	100	89.220	ENSMPUG00000004585	PARP1	99	88.798	Mustela_putorius_furo
ENSDORG00000005234	Parp1	93	73.064	ENSMLUG00000012285	PARP1	99	72.568	Myotis_lucifugus
ENSDORG00000005234	Parp1	100	88.900	ENSNGAG00000003885	Parp1	98	88.028	Nannospalax_galili
ENSDORG00000005234	Parp1	100	69.365	ENSNBRG00000017434	parp1	99	69.239	Neolamprologus_brichardi
ENSDORG00000005234	Parp1	94	91.799	ENSNLEG00000013905	PARP1	99	91.799	Nomascus_leucogenys
ENSDORG00000005234	Parp1	69	91.343	ENSMEUG00000007720	PARP1	87	91.343	Notamacropus_eugenii
ENSDORG00000005234	Parp1	100	90.452	ENSOPRG00000011722	PARP1	99	90.452	Ochotona_princeps
ENSDORG00000005234	Parp1	100	86.948	ENSODEG00000007424	PARP1	99	87.667	Octodon_degus
ENSDORG00000005234	Parp1	100	69.765	ENSONIG00000013486	parp1	98	68.068	Oreochromis_niloticus
ENSDORG00000005234	Parp1	99	80.123	ENSOANG00000001488	PARP1	100	80.635	Ornithorhynchus_anatinus
ENSDORG00000005234	Parp1	100	90.359	ENSOCUG00000017820	PARP1	99	90.359	Oryctolagus_cuniculus
ENSDORG00000005234	Parp1	100	68.469	ENSORLG00000013691	parp1	99	67.857	Oryzias_latipes
ENSDORG00000005234	Parp1	100	68.469	ENSORLG00020001074	parp1	99	67.857	Oryzias_latipes_hni
ENSDORG00000005234	Parp1	100	68.571	ENSORLG00015007090	parp1	99	67.959	Oryzias_latipes_hsok
ENSDORG00000005234	Parp1	100	89.425	ENSOGAG00000016206	PARP1	99	89.425	Otolemur_garnettii
ENSDORG00000005234	Parp1	100	87.090	ENSOARG00000000811	PARP1	99	87.090	Ovis_aries
ENSDORG00000005234	Parp1	100	90.554	ENSPPAG00000040862	PARP1	99	90.554	Pan_paniscus
ENSDORG00000005234	Parp1	100	87.770	ENSPPRG00000003528	PARP1	100	87.770	Panthera_pardus
ENSDORG00000005234	Parp1	97	75.553	ENSPTIG00000009102	PARP1	98	75.553	Panthera_tigris_altaica
ENSDORG00000005234	Parp1	100	90.554	ENSPTRG00000002049	PARP1	99	90.554	Pan_troglodytes
ENSDORG00000005234	Parp1	100	90.667	ENSPANG00000011198	PARP1	99	90.667	Papio_anubis
ENSDORG00000005234	Parp1	100	68.373	ENSPKIG00000006039	parp1	100	68.782	Paramormyrops_kingsleyae
ENSDORG00000005234	Parp1	100	76.224	ENSPSIG00000016374	PARP1	100	77.198	Pelodiscus_sinensis
ENSDORG00000005234	Parp1	100	65.373	ENSPMGG00000008936	parp1	99	65.169	Periophthalmus_magnuspinnatus
ENSDORG00000005234	Parp1	100	89.220	ENSPEMG00000020230	Parp1	99	89.220	Peromyscus_maniculatus_bairdii
ENSDORG00000005234	Parp1	100	81.967	ENSPCIG00000006436	PARP1	98	85.207	Phascolarctos_cinereus
ENSDORG00000005234	Parp1	100	68.265	ENSPFOG00000002342	parp1	99	67.959	Poecilia_formosa
ENSDORG00000005234	Parp1	100	69.082	ENSPLAG00000000909	parp1	99	68.673	Poecilia_latipinna
ENSDORG00000005234	Parp1	100	69.184	ENSPMEG00000013979	parp1	99	68.776	Poecilia_mexicana
ENSDORG00000005234	Parp1	100	69.082	ENSPREG00000001114	parp1	99	68.673	Poecilia_reticulata
ENSDORG00000005234	Parp1	99	91.255	ENSPPYG00000000164	PARP1	100	91.255	Pongo_abelii
ENSDORG00000005234	Parp1	64	92.901	ENSPCAG00000005558	-	62	92.901	Procavia_capensis
ENSDORG00000005234	Parp1	100	90.041	ENSPCOG00000016918	PARP1	99	90.246	Propithecus_coquereli
ENSDORG00000005234	Parp1	86	93.396	ENSPVAG00000005543	PARP1	82	93.396	Pteropus_vampyrus
ENSDORG00000005234	Parp1	100	69.365	ENSPNYG00000009702	parp1	99	69.239	Pundamilia_nyererei
ENSDORG00000005234	Parp1	100	68.426	ENSPNAG00000002787	parp1	99	68.426	Pygocentrus_nattereri
ENSDORG00000005234	Parp1	100	88.923	ENSRNOG00000003084	Parp1	99	88.718	Rattus_norvegicus
ENSDORG00000005234	Parp1	100	90.349	ENSRBIG00000044893	PARP1	99	90.349	Rhinopithecus_bieti
ENSDORG00000005234	Parp1	100	90.349	ENSRROG00000029280	PARP1	99	90.349	Rhinopithecus_roxellana
ENSDORG00000005234	Parp1	99	63.860	ENSRROG00000040615	-	100	66.423	Rhinopithecus_roxellana
ENSDORG00000005234	Parp1	100	91.059	ENSSBOG00000010144	PARP1	99	91.059	Saimiri_boliviensis_boliviensis
ENSDORG00000005234	Parp1	99	81.520	ENSSHAG00000001991	PARP1	100	81.006	Sarcophilus_harrisii
ENSDORG00000005234	Parp1	100	69.583	ENSSFOG00015020017	parp1	99	69.074	Scleropages_formosus
ENSDORG00000005234	Parp1	100	68.846	ENSSMAG00000013799	parp1	99	68.335	Scophthalmus_maximus
ENSDORG00000005234	Parp1	100	68.539	ENSSDUG00000016626	parp1	99	67.824	Seriola_dumerili
ENSDORG00000005234	Parp1	100	68.539	ENSSLDG00000006384	parp1	99	67.824	Seriola_lalandi_dorsalis
ENSDORG00000005234	Parp1	56	93.056	ENSSARG00000009436	-	59	93.056	Sorex_araneus
ENSDORG00000005234	Parp1	100	72.923	ENSSPUG00000007790	PARP1	99	73.128	Sphenodon_punctatus
ENSDORG00000005234	Parp1	100	67.454	ENSSPAG00000019074	parp1	99	68.233	Stegastes_partitus
ENSDORG00000005234	Parp1	100	89.117	ENSSSCG00000023660	PARP1	99	89.117	Sus_scrofa
ENSDORG00000005234	Parp1	92	77.976	ENSTGUG00000004260	-	100	77.976	Taeniopygia_guttata
ENSDORG00000005234	Parp1	100	68.098	ENSTRUG00000014490	parp1	99	67.791	Takifugu_rubripes
ENSDORG00000005234	Parp1	100	67.850	ENSTNIG00000016384	parp1	99	67.447	Tetraodon_nigroviridis
ENSDORG00000005234	Parp1	87	92.070	ENSTBEG00000002364	PARP1	92	92.070	Tupaia_belangeri
ENSDORG00000005234	Parp1	100	84.995	ENSTTRG00000000188	PARP1	99	84.995	Tursiops_truncatus
ENSDORG00000005234	Parp1	99	89.538	ENSUAMG00000014388	PARP1	100	89.538	Ursus_americanus
ENSDORG00000005234	Parp1	100	79.550	ENSUMAG00000014555	PARP1	99	80.615	Ursus_maritimus
ENSDORG00000005234	Parp1	83	94.510	ENSVPAG00000011411	PARP1	83	94.510	Vicugna_pacos
ENSDORG00000005234	Parp1	99	89.300	ENSVVUG00000001655	PARP1	100	89.300	Vulpes_vulpes
ENSDORG00000005234	Parp1	99	72.812	ENSXETG00000022610	parp1	98	72.194	Xenopus_tropicalis
ENSDORG00000005234	Parp1	100	68.163	ENSXMAG00000003632	parp1	99	67.755	Xiphophorus_maculatus