EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDORG00000005352 (Gene tree)
Gene ID
106001196
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Plus strand
Length
21167 bases
Position
chrKN672353.1:1534123-1555289
Accession
106001196
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000026308Fox-1_CPF12414.87.5e-4111
ENSDORP00000017533Fox-1_CPF12414.88.5e-4111
ENSDORP00000005004Fox-1_CPF12414.81.8e-4011
ENSDORP00000022659Fox-1_CPF12414.84e-4011
ENSDORP00000005004RRM_1PF00076.228e-1311
ENSDORP00000017533RRM_1PF00076.228.7e-1311
ENSDORP00000026308RRM_1PF00076.221.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000025703-843-ENSDORP00000022659280 (aa)-UPI000BAD2567
ENSDORT00000034066-1083-ENSDORP00000026308360 (aa)-UPI000BAD0A7B
ENSDORT00000005350-936-ENSDORP00000005004311 (aa)-UPI000BAD0D06
ENSDORT00000024752-978XM_013036336ENSDORP00000017533325 (aa)XP_012891790UPI000BACEFBD
Gene Model
Click here to download ENSDORG00000005352's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005352's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDORG00000005352Rbfox310053.608ENSDORG00000010024Rbfox19151.442
ENSDORG00000005352Rbfox310044.903ENSDORG00000015003Rbfox29645.636
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000005352Rbfox39581.341ENSG00000167281RBFOX39995.946Homo_sapiens
ENSDORG00000005352Rbfox37783.333ENSAPOG00000015658-8950.562Acanthochromis_polyacanthus
ENSDORG00000005352Rbfox310066.756ENSAPOG00000021630rbfox3b8264.804Acanthochromis_polyacanthus
ENSDORG00000005352Rbfox39564.266ENSAMEG00000014170RBFOX39164.020Ailuropoda_melanoleuca
ENSDORG00000005352Rbfox38186.957ENSACIG00000010817rbfox3b9559.942Amphilophus_citrinellus
ENSDORG00000005352Rbfox36961.957ENSACIG00000003768-8352.161Amphilophus_citrinellus
ENSDORG00000005352Rbfox37683.333ENSAOCG00000010786-8056.857Amphiprion_ocellaris
ENSDORG00000005352Rbfox310063.231ENSAOCG00000012358rbfox3b8163.663Amphiprion_ocellaris
ENSDORG00000005352Rbfox37683.333ENSAPEG00000015891-7953.804Amphiprion_percula
ENSDORG00000005352Rbfox37782.500ENSAPEG00000019081rbfox3b7782.500Amphiprion_percula
ENSDORG00000005352Rbfox310063.636ENSATEG00000019945rbfox3b9664.672Anabas_testudineus
ENSDORG00000005352Rbfox39558.382ENSATEG00000023101-9359.544Anabas_testudineus
ENSDORG00000005352Rbfox310066.111ENSACAG00000016093RBFOX38368.406Anolis_carolinensis
ENSDORG00000005352Rbfox39578.914ENSANAG00000023457RBFOX38781.470Aotus_nancymaae
ENSDORG00000005352Rbfox310066.307ENSACLG00000020011rbfox3b9563.188Astatotilapia_calliptera
ENSDORG00000005352Rbfox310060.111ENSACLG00000025552-8853.356Astatotilapia_calliptera
ENSDORG00000005352Rbfox310058.611ENSAMXG00000042841rbfox3b8559.420Astyanax_mexicanus
ENSDORG00000005352Rbfox39360.511ENSAMXG00000037246rbfox3a9061.891Astyanax_mexicanus
ENSDORG00000005352Rbfox39576.997ENSBTAG00000006280RBFOX39579.553Bos_taurus
ENSDORG00000005352Rbfox39581.050ENSCJAG00000009563RBFOX39684.884Callithrix_jacchus
ENSDORG00000005352Rbfox37774.380ENSCAFG00000005547RBFOX38571.378Canis_familiaris
ENSDORG00000005352Rbfox39682.961ENSCAFG00020008126RBFOX39685.196Canis_lupus_dingo
ENSDORG00000005352Rbfox39681.564ENSCHIG00000009124RBFOX39683.799Capra_hircus
ENSDORG00000005352Rbfox39581.395ENSTSYG00000029617RBFOX39685.507Carlito_syrichta
ENSDORG00000005352Rbfox39684.765ENSCPOG00000021703RBFOX39684.765Cavia_porcellus
ENSDORG00000005352Rbfox310081.905ENSCCAG00000028450RBFOX39581.470Cebus_capucinus
ENSDORG00000005352Rbfox39578.947ENSCATG00000018349RBFOX38880.758Cercocebus_atys
ENSDORG00000005352Rbfox39685.515ENSCLAG00000006449RBFOX39685.515Chinchilla_lanigera
ENSDORG00000005352Rbfox39568.805ENSCSAG00000002355RBFOX39571.720Chlorocebus_sabaeus
ENSDORG00000005352Rbfox39669.663ENSCPBG00000010904RBFOX39568.713Chrysemys_picta_bellii
ENSDORG00000005352Rbfox39683.799ENSCANG00000043120RBFOX39686.034Colobus_angolensis_palliatus
ENSDORG00000005352Rbfox39682.500ENSCGRG00001019476Rbfox39684.444Cricetulus_griseus_chok1gshd
ENSDORG00000005352Rbfox39682.500ENSCGRG00000003268Rbfox39684.444Cricetulus_griseus_crigri
ENSDORG00000005352Rbfox39950.933ENSCSEG00000020606RBFOX38752.174Cynoglossus_semilaevis
ENSDORG00000005352Rbfox38183.333ENSCSEG00000015567RBFOX38959.079Cynoglossus_semilaevis
ENSDORG00000005352Rbfox310063.231ENSCVAG00000006882rbfox3b8163.663Cyprinodon_variegatus
ENSDORG00000005352Rbfox38178.261ENSDARG00000074310rbfox3b8265.238Danio_rerio
ENSDORG00000005352Rbfox39558.453ENSDARG00000010083rbfox3a9461.127Danio_rerio
ENSDORG00000005352Rbfox37786.008ENSDNOG00000039391RBFOX38572.500Dasypus_novemcinctus
ENSDORG00000005352Rbfox310055.928ENSEBUG00000002129RBFOX39255.764Eptatretus_burgeri
ENSDORG00000005352Rbfox38547.176ENSEBUG00000013559RBFOX37146.454Eptatretus_burgeri
ENSDORG00000005352Rbfox39568.406ENSEASG00005005059RBFOX39571.014Equus_asinus_asinus
ENSDORG00000005352Rbfox39568.116ENSECAG00000023811RBFOX39570.725Equus_caballus
ENSDORG00000005352Rbfox39670.391ENSEEUG00000013974RBFOX39671.508Erinaceus_europaeus
ENSDORG00000005352Rbfox35054.945ENSELUG00000009807-5058.025Esox_lucius
ENSDORG00000005352Rbfox310065.952ENSELUG00000017963rbfox3b9557.508Esox_lucius
ENSDORG00000005352Rbfox39576.677ENSFCAG00000002555RBFOX39579.233Felis_catus
ENSDORG00000005352Rbfox39556.780ENSFALG00000012288RBFOX39253.606Ficedula_albicollis
ENSDORG00000005352Rbfox39879.837ENSFDAG00000007489RBFOX39779.837Fukomys_damarensis
ENSDORG00000005352Rbfox310060.061ENSFHEG00000008550rbfox3b9558.147Fundulus_heteroclitus
ENSDORG00000005352Rbfox310064.072ENSGMOG00000019304-9562.696Gadus_morhua
ENSDORG00000005352Rbfox39565.598ENSGALG00000032889RBFOX38368.513Gallus_gallus
ENSDORG00000005352Rbfox38186.957ENSGAFG00000005025rbfox3b8662.500Gambusia_affinis
ENSDORG00000005352Rbfox39664.560ENSGACG00000002138-9665.110Gasterosteus_aculeatus
ENSDORG00000005352Rbfox39669.663ENSGAGG00000020025RBFOX39568.713Gopherus_agassizii
ENSDORG00000005352Rbfox39683.799ENSGGOG00000012546RBFOX39686.034Gorilla_gorilla
ENSDORG00000005352Rbfox310062.766ENSHBUG00000023098-9060.556Haplochromis_burtoni
ENSDORG00000005352Rbfox310066.486ENSHBUG00000018099rbfox3b8264.525Haplochromis_burtoni
ENSDORG00000005352Rbfox39684.022ENSHGLG00000008679RBFOX39684.022Heterocephalus_glaber_female
ENSDORG00000005352Rbfox39680.165ENSHGLG00100014739RBFOX39680.165Heterocephalus_glaber_male
ENSDORG00000005352Rbfox39458.739ENSHCOG00000007444RBFOX37857.925Hippocampus_comes
ENSDORG00000005352Rbfox37581.818ENSHCOG00000001863RBFOX38586.364Hippocampus_comes
ENSDORG00000005352Rbfox39661.157ENSIPUG00000012010rbfox3a7084.615Ictalurus_punctatus
ENSDORG00000005352Rbfox310055.367ENSIPUG00000021966rbfox3b8464.444Ictalurus_punctatus
ENSDORG00000005352Rbfox39861.813ENSSTOG00000026817RBFOX39481.061Ictidomys_tridecemlineatus
ENSDORG00000005352Rbfox39683.240ENSJJAG00000014167Rbfox39685.475Jaculus_jaculus
ENSDORG00000005352Rbfox38186.957ENSKMAG00000006726rbfox3b8758.289Kryptolebias_marmoratus
ENSDORG00000005352Rbfox39560.983ENSLBEG00000022508-8161.850Labrus_bergylta
ENSDORG00000005352Rbfox38186.957ENSLBEG00000004030rbfox3b9559.366Labrus_bergylta
ENSDORG00000005352Rbfox39555.285ENSLACG00000018409-9355.000Latimeria_chalumnae
ENSDORG00000005352Rbfox39561.960ENSLOCG00000012267rbfox3a9066.282Lepisosteus_oculatus
ENSDORG00000005352Rbfox39682.123ENSLAFG00000016623RBFOX39683.799Loxodonta_africana
ENSDORG00000005352Rbfox39681.232ENSMFAG00000002247RBFOX39685.465Macaca_fascicularis
ENSDORG00000005352Rbfox39579.233ENSMMUG00000023028RBFOX38895.652Macaca_mulatta
ENSDORG00000005352Rbfox39681.513ENSMNEG00000041147RBFOX39681.513Macaca_nemestrina
ENSDORG00000005352Rbfox39578.947ENSMLEG00000025686RBFOX39571.720Mandrillus_leucophaeus
ENSDORG00000005352Rbfox39657.838ENSMAMG00000020600-9257.838Mastacembelus_armatus
ENSDORG00000005352Rbfox38186.957ENSMAMG00000019810rbfox3b9559.172Mastacembelus_armatus
ENSDORG00000005352Rbfox36354.647ENSMZEG00005003055-5391.736Maylandia_zebra
ENSDORG00000005352Rbfox310066.486ENSMZEG00005000781rbfox3b8264.525Maylandia_zebra
ENSDORG00000005352Rbfox35072.396ENSMGAG00000005600RBFOX37372.396Meleagris_gallopavo
ENSDORG00000005352Rbfox39683.889ENSMAUG00000013543Rbfox39684.444Mesocricetus_auratus
ENSDORG00000005352Rbfox310085.753ENSMICG00000014898RBFOX39786.275Microcebus_murinus
ENSDORG00000005352Rbfox39682.730ENSMOCG00000015373Rbfox39684.958Microtus_ochrogaster
ENSDORG00000005352Rbfox310061.496ENSMMOG00000020193rbfox3b9155.814Mola_mola
ENSDORG00000005352Rbfox39565.889ENSMODG00000002089RBFOX38368.805Monodelphis_domestica
ENSDORG00000005352Rbfox310061.838ENSMALG00000020407rbfox3b8162.500Monopterus_albus
ENSDORG00000005352Rbfox38185.417ENSMALG00000018270-9257.429Monopterus_albus
ENSDORG00000005352Rbfox39682.730MGP_CAROLIEiJ_G0017487Rbfox39897.183Mus_caroli
ENSDORG00000005352Rbfox39684.401ENSMUSG00000025576Rbfox39897.183Mus_musculus
ENSDORG00000005352Rbfox39683.333MGP_PahariEiJ_G0018614Rbfox39897.887Mus_pahari
ENSDORG00000005352Rbfox39683.008MGP_SPRETEiJ_G0018331Rbfox39897.183Mus_spretus
ENSDORG00000005352Rbfox39664.467ENSMPUG00000012319RBFOX39166.497Mustela_putorius_furo
ENSDORG00000005352Rbfox39683.565ENSNGAG00000018006Rbfox39685.794Nannospalax_galili
ENSDORG00000005352Rbfox38077.273ENSNBRG00000022885-7887.805Neolamprologus_brichardi
ENSDORG00000005352Rbfox310062.640ENSNBRG00000010102rbfox3b7488.889Neolamprologus_brichardi
ENSDORG00000005352Rbfox35696.296ENSNLEG00000000153-7996.296Nomascus_leucogenys
ENSDORG00000005352Rbfox39565.306ENSMEUG00000004218-9665.598Notamacropus_eugenii
ENSDORG00000005352Rbfox35786.667ENSOPRG00000016279-6588.333Ochotona_princeps
ENSDORG00000005352Rbfox39685.515ENSODEG00000009433RBFOX39685.515Octodon_degus
ENSDORG00000005352Rbfox310060.665ENSONIG00000007282-8761.383Oreochromis_niloticus
ENSDORG00000005352Rbfox310070.667ENSONIG00000009549rbfox3b9669.359Oreochromis_niloticus
ENSDORG00000005352Rbfox37778.926ENSOCUG00000014217RBFOX36678.926Oryctolagus_cuniculus
ENSDORG00000005352Rbfox310065.952ENSORLG00000000905rbfox3b6761.333Oryzias_latipes
ENSDORG00000005352Rbfox310065.952ENSORLG00020018030rbfox3b8957.188Oryzias_latipes_hni
ENSDORG00000005352Rbfox37786.957ENSORLG00015009200rbfox3b9186.957Oryzias_latipes_hsok
ENSDORG00000005352Rbfox36366.279ENSOMEG00000014677rbfox3b7662.264Oryzias_melastigma
ENSDORG00000005352Rbfox39568.805ENSOGAG00000029595RBFOX39067.801Otolemur_garnettii
ENSDORG00000005352Rbfox35051.295ENSOARG00000002908RBFOX39248.329Ovis_aries
ENSDORG00000005352Rbfox38084.281ENSPPAG00000025383RBFOX39084.591Pan_paniscus
ENSDORG00000005352Rbfox39578.717ENSPPRG00000007819RBFOX39682.849Panthera_pardus
ENSDORG00000005352Rbfox39683.799ENSPTRG00000009727RBFOX39686.034Pan_troglodytes
ENSDORG00000005352Rbfox39578.947ENSPANG00000019837RBFOX39571.720Papio_anubis
ENSDORG00000005352Rbfox39665.097ENSPKIG00000010299rbfox3a8558.090Paramormyrops_kingsleyae
ENSDORG00000005352Rbfox310056.284ENSPKIG00000022633-8554.520Paramormyrops_kingsleyae
ENSDORG00000005352Rbfox38361.415ENSPMGG00000008000rbfox3b7759.459Periophthalmus_magnuspinnatus
ENSDORG00000005352Rbfox39683.008ENSPEMG00000010500Rbfox39685.237Peromyscus_maniculatus_bairdii
ENSDORG00000005352Rbfox37260.800ENSPMAG00000008689rbfox3b9961.200Petromyzon_marinus
ENSDORG00000005352Rbfox39679.272ENSPCIG00000005766RBFOX39682.558Phascolarctos_cinereus
ENSDORG00000005352Rbfox310066.756ENSPFOG00000018294rbfox3b9659.615Poecilia_formosa
ENSDORG00000005352Rbfox36091.111ENSPLAG00000000481rbfox3b6468.235Poecilia_latipinna
ENSDORG00000005352Rbfox310060.061ENSPMEG00000022997rbfox3b9558.147Poecilia_mexicana
ENSDORG00000005352Rbfox310063.056ENSPREG00000012886rbfox3b8663.478Poecilia_reticulata
ENSDORG00000005352Rbfox39862.431ENSPPYG00000008704RBFOX39361.708Pongo_abelii
ENSDORG00000005352Rbfox39577.551ENSPCAG00000001401RBFOX39681.686Procavia_capensis
ENSDORG00000005352Rbfox310081.285ENSPCOG00000012689RBFOX39785.756Propithecus_coquereli
ENSDORG00000005352Rbfox39572.384ENSPVAG00000015243RBFOX39676.232Pteropus_vampyrus
ENSDORG00000005352Rbfox37088.889ENSPNYG00000010414rbfox3b7488.889Pundamilia_nyererei
ENSDORG00000005352Rbfox38077.273ENSPNYG00000009079-7787.805Pundamilia_nyererei
ENSDORG00000005352Rbfox39661.708ENSPNAG00000002889rbfox3a8263.085Pygocentrus_nattereri
ENSDORG00000005352Rbfox38184.783ENSPNAG00000018173rbfox3b8551.316Pygocentrus_nattereri
ENSDORG00000005352Rbfox39683.333ENSRNOG00000003386Rbfox39685.278Rattus_norvegicus
ENSDORG00000005352Rbfox39578.947ENSRBIG00000040449RBFOX38580.523Rhinopithecus_bieti
ENSDORG00000005352Rbfox39578.947ENSRROG00000000766RBFOX39571.720Rhinopithecus_roxellana
ENSDORG00000005352Rbfox39683.240ENSSBOG00000031591RBFOX39685.475Saimiri_boliviensis_boliviensis
ENSDORG00000005352Rbfox39564.103ENSSHAG00000016076RBFOX39563.782Sarcophilus_harrisii
ENSDORG00000005352Rbfox39552.802ENSSFOG00015004716RBFOX38452.907Scleropages_formosus
ENSDORG00000005352Rbfox39664.266ENSSFOG00015023260rbfox3a8958.861Scleropages_formosus
ENSDORG00000005352Rbfox310062.821ENSSMAG00000012618rbfox3b7267.742Scophthalmus_maximus
ENSDORG00000005352Rbfox310060.556ENSSMAG00000019052-9560.983Scophthalmus_maximus
ENSDORG00000005352Rbfox39658.696ENSSDUG00000015801-8080.702Seriola_dumerili
ENSDORG00000005352Rbfox310060.061ENSSDUG00000023183rbfox3b9558.147Seriola_dumerili
ENSDORG00000005352Rbfox310063.231ENSSLDG00000000149rbfox3b8163.663Seriola_lalandi_dorsalis
ENSDORG00000005352Rbfox37683.333ENSSLDG00000016098-9059.350Seriola_lalandi_dorsalis
ENSDORG00000005352Rbfox39270.930ENSSPUG00000011733RBFOX39569.477Sphenodon_punctatus
ENSDORG00000005352Rbfox38186.957ENSSPAG00000017571rbfox3b8055.331Stegastes_partitus
ENSDORG00000005352Rbfox38652.681ENSSPAG00000004898-8153.292Stegastes_partitus
ENSDORG00000005352Rbfox38880.606ENSSSCG00000039498RBFOX310083.030Sus_scrofa
ENSDORG00000005352Rbfox310062.667ENSTRUG00000004894rbfox3b9059.239Takifugu_rubripes
ENSDORG00000005352Rbfox310057.801ENSTNIG00000011278rbfox3b9254.808Tetraodon_nigroviridis
ENSDORG00000005352Rbfox37872.941ENSTBEG00000004296-6972.941Tupaia_belangeri
ENSDORG00000005352Rbfox39388.384ENSTTRG00000003676RBFOX39678.717Tursiops_truncatus
ENSDORG00000005352Rbfox39567.638ENSUAMG00000004668RBFOX39571.137Ursus_americanus
ENSDORG00000005352Rbfox39580.233ENSVVUG00000017864RBFOX38584.593Vulpes_vulpes
ENSDORG00000005352Rbfox310054.062ENSXETG00000020236rbfox39151.309Xenopus_tropicalis
ENSDORG00000005352Rbfox38084.444ENSXCOG00000018262rbfox3b9558.892Xiphophorus_couchianus
ENSDORG00000005352Rbfox310070.000ENSXMAG00000012939rbfox3b9654.023Xiphophorus_maculatus

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