EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005406 (Gene tree)
Gene ID: 105996324
Gene Symbol: Prpf6
Alias: 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 66765 bases
Position: chrKN672475.1:2376851-2443615
Accession: 105996324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005057	PRP1_N	PF06424.12	2.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005406	-	3043	XM_013030364	ENSDORP00000005057	856 (aa)	XP_012885818	UPI000BACF1CA

Gene Model

Click here to download ENSDORG00000005406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005406	Prpf6	100	97.079	ENSG00000101161	PRPF6	91	97.079	Homo_sapiens
ENSDORG00000005406	Prpf6	100	93.107	ENSAPOG00000010395	prpf6	87	93.107	Acanthochromis_polyacanthus
ENSDORG00000005406	Prpf6	100	97.780	ENSAMEG00000001916	PRPF6	90	97.780	Ailuropoda_melanoleuca
ENSDORG00000005406	Prpf6	100	92.640	ENSACIG00000019862	prpf6	87	92.640	Amphilophus_citrinellus
ENSDORG00000005406	Prpf6	100	92.991	ENSAOCG00000012988	prpf6	87	92.991	Amphiprion_ocellaris
ENSDORG00000005406	Prpf6	100	85.631	ENSAPEG00000008301	prpf6	91	85.748	Amphiprion_percula
ENSDORG00000005406	Prpf6	100	92.523	ENSATEG00000005581	prpf6	87	92.523	Anabas_testudineus
ENSDORG00000005406	Prpf6	100	97.196	ENSACAG00000006464	PRPF6	87	97.196	Anolis_carolinensis
ENSDORG00000005406	Prpf6	100	97.430	ENSANAG00000012661	PRPF6	91	97.430	Aotus_nancymaae
ENSDORG00000005406	Prpf6	100	92.407	ENSACLG00000025875	prpf6	87	92.407	Astatotilapia_calliptera
ENSDORG00000005406	Prpf6	100	92.640	ENSAMXG00000001929	prpf6	87	92.640	Astyanax_mexicanus
ENSDORG00000005406	Prpf6	100	97.547	ENSBTAG00000011656	PRPF6	91	97.547	Bos_taurus
ENSDORG00000005406	Prpf6	100	97.430	ENSCJAG00000010616	PRPF6	91	97.430	Callithrix_jacchus
ENSDORG00000005406	Prpf6	100	97.664	ENSCAFG00000013165	PRPF6	91	97.664	Canis_familiaris
ENSDORG00000005406	Prpf6	100	97.664	ENSCAFG00020002050	PRPF6	91	97.664	Canis_lupus_dingo
ENSDORG00000005406	Prpf6	100	97.547	ENSCHIG00000018187	PRPF6	91	97.547	Capra_hircus
ENSDORG00000005406	Prpf6	100	97.664	ENSTSYG00000007814	PRPF6	91	97.664	Carlito_syrichta
ENSDORG00000005406	Prpf6	100	97.196	ENSCAPG00000015077	PRPF6	93	97.196	Cavia_aperea
ENSDORG00000005406	Prpf6	100	98.598	ENSCPOG00000007518	PRPF6	91	98.598	Cavia_porcellus
ENSDORG00000005406	Prpf6	100	93.925	ENSCCAG00000024564	PRPF6	91	94.042	Cebus_capucinus
ENSDORG00000005406	Prpf6	100	97.196	ENSCATG00000037473	PRPF6	91	97.196	Cercocebus_atys
ENSDORG00000005406	Prpf6	100	94.179	ENSCLAG00000003854	PRPF6	91	94.179	Chinchilla_lanigera
ENSDORG00000005406	Prpf6	100	91.531	ENSCSAG00000016742	PRPF6	91	91.531	Chlorocebus_sabaeus
ENSDORG00000005406	Prpf6	93	80.650	ENSCHOG00000003315	-	100	80.650	Choloepus_hoffmanni
ENSDORG00000005406	Prpf6	100	97.664	ENSCPBG00000013964	PRPF6	88	97.664	Chrysemys_picta_bellii
ENSDORG00000005406	Prpf6	100	73.581	ENSCING00000008817	-	90	73.581	Ciona_intestinalis
ENSDORG00000005406	Prpf6	100	96.963	ENSCANG00000038230	PRPF6	91	96.963	Colobus_angolensis_palliatus
ENSDORG00000005406	Prpf6	100	98.248	ENSCGRG00001022666	Prpf6	91	98.248	Cricetulus_griseus_chok1gshd
ENSDORG00000005406	Prpf6	100	86.565	ENSCSEG00000018561	prpf6	91	86.565	Cynoglossus_semilaevis
ENSDORG00000005406	Prpf6	100	92.874	ENSCVAG00000010550	prpf6	87	92.874	Cyprinodon_variegatus
ENSDORG00000005406	Prpf6	100	92.757	ENSDARG00000091367	prpf6	90	92.757	Danio_rerio
ENSDORG00000005406	Prpf6	100	97.430	ENSDNOG00000040544	PRPF6	91	97.430	Dasypus_novemcinctus
ENSDORG00000005406	Prpf6	99	72.759	FBgn0036828	CG6841	90	72.759	Drosophila_melanogaster
ENSDORG00000005406	Prpf6	84	100.000	ENSETEG00000004447	PRPF6	76	100.000	Echinops_telfairi
ENSDORG00000005406	Prpf6	100	86.380	ENSEBUG00000008835	prpf6	91	86.380	Eptatretus_burgeri
ENSDORG00000005406	Prpf6	100	97.664	ENSEASG00005023115	PRPF6	91	97.664	Equus_asinus_asinus
ENSDORG00000005406	Prpf6	100	92.991	ENSECAG00000013983	PRPF6	91	92.991	Equus_caballus
ENSDORG00000005406	Prpf6	96	93.995	ENSEEUG00000000180	PRPF6	78	93.995	Erinaceus_europaeus
ENSDORG00000005406	Prpf6	100	91.355	ENSELUG00000001945	prpf6	85	91.355	Esox_lucius
ENSDORG00000005406	Prpf6	100	97.664	ENSFCAG00000001183	PRPF6	91	97.664	Felis_catus
ENSDORG00000005406	Prpf6	100	97.547	ENSFALG00000010326	-	88	97.547	Ficedula_albicollis
ENSDORG00000005406	Prpf6	100	91.121	ENSFALG00000006046	-	88	91.121	Ficedula_albicollis
ENSDORG00000005406	Prpf6	100	98.598	ENSFDAG00000006451	PRPF6	97	98.598	Fukomys_damarensis
ENSDORG00000005406	Prpf6	100	93.107	ENSFHEG00000000560	prpf6	88	93.107	Fundulus_heteroclitus
ENSDORG00000005406	Prpf6	100	89.082	ENSGMOG00000015622	prpf6	90	89.082	Gadus_morhua
ENSDORG00000005406	Prpf6	100	97.313	ENSGALG00000006001	PRPF6	91	97.313	Gallus_gallus
ENSDORG00000005406	Prpf6	100	87.617	ENSGAFG00000021109	prpf6	87	87.617	Gambusia_affinis
ENSDORG00000005406	Prpf6	100	91.238	ENSGACG00000002576	prpf6	90	91.238	Gasterosteus_aculeatus
ENSDORG00000005406	Prpf6	100	97.547	ENSGAGG00000008653	PRPF6	88	97.547	Gopherus_agassizii
ENSDORG00000005406	Prpf6	100	97.079	ENSGGOG00000016876	PRPF6	91	99.258	Gorilla_gorilla
ENSDORG00000005406	Prpf6	100	92.407	ENSHBUG00000004496	prpf6	87	92.407	Haplochromis_burtoni
ENSDORG00000005406	Prpf6	100	98.364	ENSHGLG00000009222	PRPF6	91	98.364	Heterocephalus_glaber_female
ENSDORG00000005406	Prpf6	100	98.364	ENSHGLG00100016600	PRPF6	93	98.364	Heterocephalus_glaber_male
ENSDORG00000005406	Prpf6	100	91.472	ENSHCOG00000011513	prpf6	87	91.472	Hippocampus_comes
ENSDORG00000005406	Prpf6	100	93.107	ENSIPUG00000004912	prpf6	88	93.107	Ictalurus_punctatus
ENSDORG00000005406	Prpf6	100	95.799	ENSSTOG00000002922	PRPF6	91	95.799	Ictidomys_tridecemlineatus
ENSDORG00000005406	Prpf6	100	98.598	ENSJJAG00000000836	Prpf6	91	98.598	Jaculus_jaculus
ENSDORG00000005406	Prpf6	100	92.523	ENSKMAG00000017800	prpf6	87	92.523	Kryptolebias_marmoratus
ENSDORG00000005406	Prpf6	100	91.822	ENSLBEG00000012582	prpf6	87	91.822	Labrus_bergylta
ENSDORG00000005406	Prpf6	100	94.393	ENSLOCG00000004827	prpf6	86	94.393	Lepisosteus_oculatus
ENSDORG00000005406	Prpf6	100	97.313	ENSLAFG00000005272	PRPF6	91	97.313	Loxodonta_africana
ENSDORG00000005406	Prpf6	100	96.963	ENSMFAG00000037542	PRPF6	91	99.258	Macaca_fascicularis
ENSDORG00000005406	Prpf6	97	98.911	ENSMMUG00000015558	PRPF6	93	98.911	Macaca_mulatta
ENSDORG00000005406	Prpf6	100	81.257	ENSMNEG00000045555	PRPF6	91	81.257	Macaca_nemestrina
ENSDORG00000005406	Prpf6	100	92.757	ENSMAMG00000010718	prpf6	87	92.757	Mastacembelus_armatus
ENSDORG00000005406	Prpf6	100	92.290	ENSMZEG00005026539	prpf6	97	92.290	Maylandia_zebra
ENSDORG00000005406	Prpf6	100	91.832	ENSMZEG00005015261	-	90	91.832	Maylandia_zebra
ENSDORG00000005406	Prpf6	100	97.547	ENSMGAG00000006634	PRPF6	93	97.547	Meleagris_gallopavo
ENSDORG00000005406	Prpf6	100	98.364	ENSMAUG00000013969	Prpf6	91	98.364	Mesocricetus_auratus
ENSDORG00000005406	Prpf6	96	97.324	ENSMICG00000017793	PRPF6	99	97.324	Microcebus_murinus
ENSDORG00000005406	Prpf6	100	98.248	ENSMOCG00000001701	Prpf6	91	98.248	Microtus_ochrogaster
ENSDORG00000005406	Prpf6	100	91.822	ENSMMOG00000020419	prpf6	91	91.822	Mola_mola
ENSDORG00000005406	Prpf6	97	98.072	ENSMODG00000017051	PRPF6	89	98.072	Monodelphis_domestica
ENSDORG00000005406	Prpf6	100	92.640	ENSMALG00000000089	prpf6	92	92.640	Monopterus_albus
ENSDORG00000005406	Prpf6	100	91.005	MGP_CAROLIEiJ_G0024814	Prpf6	90	91.005	Mus_caroli
ENSDORG00000005406	Prpf6	100	98.364	ENSMUSG00000002455	Prpf6	91	98.364	Mus_musculus
ENSDORG00000005406	Prpf6	100	98.364	MGP_PahariEiJ_G0026262	Prpf6	91	98.364	Mus_pahari
ENSDORG00000005406	Prpf6	100	98.364	MGP_SPRETEiJ_G0025741	Prpf6	91	98.364	Mus_spretus
ENSDORG00000005406	Prpf6	97	97.663	ENSMPUG00000008673	PRPF6	97	97.663	Mustela_putorius_furo
ENSDORG00000005406	Prpf6	100	98.481	ENSNGAG00000003365	Prpf6	91	98.481	Nannospalax_galili
ENSDORG00000005406	Prpf6	100	92.523	ENSNBRG00000015025	prpf6	87	92.523	Neolamprologus_brichardi
ENSDORG00000005406	Prpf6	100	96.963	ENSNLEG00000010208	PRPF6	91	97.217	Nomascus_leucogenys
ENSDORG00000005406	Prpf6	96	99.095	ENSMEUG00000009824	-	76	99.052	Notamacropus_eugenii
ENSDORG00000005406	Prpf6	100	92.056	ENSODEG00000004841	PRPF6	91	92.056	Octodon_degus
ENSDORG00000005406	Prpf6	100	92.407	ENSONIG00000017406	prpf6	87	92.407	Oreochromis_niloticus
ENSDORG00000005406	Prpf6	100	97.664	ENSOANG00000004920	PRPF6	91	97.664	Ornithorhynchus_anatinus
ENSDORG00000005406	Prpf6	100	96.612	ENSOCUG00000014151	PRPF6	92	96.612	Oryctolagus_cuniculus
ENSDORG00000005406	Prpf6	100	92.056	ENSORLG00000009592	prpf6	87	92.056	Oryzias_latipes
ENSDORG00000005406	Prpf6	100	92.056	ENSORLG00020001458	prpf6	87	92.056	Oryzias_latipes_hni
ENSDORG00000005406	Prpf6	100	92.056	ENSORLG00015018762	prpf6	87	92.056	Oryzias_latipes_hsok
ENSDORG00000005406	Prpf6	100	91.939	ENSOMEG00000012174	prpf6	87	91.939	Oryzias_melastigma
ENSDORG00000005406	Prpf6	100	89.032	ENSOGAG00000007573	PRPF6	91	89.032	Otolemur_garnettii
ENSDORG00000005406	Prpf6	100	97.547	ENSOARG00000008776	PRPF6	91	97.547	Ovis_aries
ENSDORG00000005406	Prpf6	100	97.079	ENSPPAG00000008686	PRPF6	91	99.258	Pan_paniscus
ENSDORG00000005406	Prpf6	100	97.664	ENSPPRG00000008497	PRPF6	91	97.664	Panthera_pardus
ENSDORG00000005406	Prpf6	100	97.664	ENSPTIG00000011184	PRPF6	91	97.664	Panthera_tigris_altaica
ENSDORG00000005406	Prpf6	100	97.079	ENSPTRG00000013765	PRPF6	91	99.258	Pan_troglodytes
ENSDORG00000005406	Prpf6	100	96.846	ENSPANG00000024135	PRPF6	91	96.846	Papio_anubis
ENSDORG00000005406	Prpf6	100	94.276	ENSPKIG00000005627	prpf6	90	94.276	Paramormyrops_kingsleyae
ENSDORG00000005406	Prpf6	100	97.780	ENSPSIG00000007717	PRPF6	97	97.780	Pelodiscus_sinensis
ENSDORG00000005406	Prpf6	100	90.198	ENSPMGG00000008925	prpf6	87	89.965	Periophthalmus_magnuspinnatus
ENSDORG00000005406	Prpf6	100	98.248	ENSPEMG00000016036	Prpf6	91	98.248	Peromyscus_maniculatus_bairdii
ENSDORG00000005406	Prpf6	100	88.345	ENSPMAG00000006144	prpf6	90	88.345	Petromyzon_marinus
ENSDORG00000005406	Prpf6	100	97.780	ENSPCIG00000017909	PRPF6	91	97.780	Phascolarctos_cinereus
ENSDORG00000005406	Prpf6	100	92.757	ENSPFOG00000006431	prpf6	87	92.757	Poecilia_formosa
ENSDORG00000005406	Prpf6	100	92.640	ENSPLAG00000005974	prpf6	87	92.640	Poecilia_latipinna
ENSDORG00000005406	Prpf6	100	92.874	ENSPMEG00000009977	prpf6	87	92.874	Poecilia_mexicana
ENSDORG00000005406	Prpf6	100	92.757	ENSPREG00000017993	prpf6	83	92.757	Poecilia_reticulata
ENSDORG00000005406	Prpf6	100	96.495	ENSPPYG00000011256	PRPF6	91	96.495	Pongo_abelii
ENSDORG00000005406	Prpf6	97	98.911	ENSPCAG00000006536	PRPF6	81	98.911	Procavia_capensis
ENSDORG00000005406	Prpf6	100	97.196	ENSPCOG00000016881	PRPF6	91	97.196	Propithecus_coquereli
ENSDORG00000005406	Prpf6	100	91.472	ENSPVAG00000014316	PRPF6	91	91.472	Pteropus_vampyrus
ENSDORG00000005406	Prpf6	100	74.329	ENSPNYG00000001939	prpf6	78	80.444	Pundamilia_nyererei
ENSDORG00000005406	Prpf6	100	93.107	ENSPNAG00000015606	prpf6	87	93.107	Pygocentrus_nattereri
ENSDORG00000005406	Prpf6	100	98.248	ENSRNOG00000051498	Prpf6	91	98.248	Rattus_norvegicus
ENSDORG00000005406	Prpf6	100	96.963	ENSRBIG00000043613	PRPF6	94	97.464	Rhinopithecus_bieti
ENSDORG00000005406	Prpf6	97	97.464	ENSRROG00000040969	PRPF6	94	97.464	Rhinopithecus_roxellana
ENSDORG00000005406	Prpf6	97	92.754	ENSSBOG00000020632	PRPF6	89	92.754	Saimiri_boliviensis_boliviensis
ENSDORG00000005406	Prpf6	100	97.780	ENSSHAG00000016810	PRPF6	91	97.780	Sarcophilus_harrisii
ENSDORG00000005406	Prpf6	100	94.159	ENSSFOG00015020859	prpf6	92	94.159	Scleropages_formosus
ENSDORG00000005406	Prpf6	100	91.706	ENSSMAG00000008112	prpf6	87	91.706	Scophthalmus_maximus
ENSDORG00000005406	Prpf6	100	92.640	ENSSDUG00000016142	prpf6	87	92.640	Seriola_dumerili
ENSDORG00000005406	Prpf6	100	92.640	ENSSLDG00000025283	prpf6	91	88.785	Seriola_lalandi_dorsalis
ENSDORG00000005406	Prpf6	100	95.794	ENSSPUG00000018260	PRPF6	97	95.794	Sphenodon_punctatus
ENSDORG00000005406	Prpf6	100	92.640	ENSSPAG00000015850	prpf6	87	92.640	Stegastes_partitus
ENSDORG00000005406	Prpf6	100	97.313	ENSSSCG00000029119	PRPF6	97	97.313	Sus_scrofa
ENSDORG00000005406	Prpf6	100	97.664	ENSTGUG00000007221	PRPF6	91	97.664	Taeniopygia_guttata
ENSDORG00000005406	Prpf6	100	91.589	ENSTRUG00000002920	prpf6	87	91.589	Takifugu_rubripes
ENSDORG00000005406	Prpf6	100	84.589	ENSTNIG00000017873	prpf6	91	84.589	Tetraodon_nigroviridis
ENSDORG00000005406	Prpf6	90	99.167	ENSTBEG00000005348	PRPF6	78	99.167	Tupaia_belangeri
ENSDORG00000005406	Prpf6	100	96.963	ENSTTRG00000013068	PRPF6	91	96.963	Tursiops_truncatus
ENSDORG00000005406	Prpf6	100	96.379	ENSUMAG00000021631	PRPF6	91	98.166	Ursus_maritimus
ENSDORG00000005406	Prpf6	100	97.664	ENSVVUG00000014948	PRPF6	91	97.664	Vulpes_vulpes
ENSDORG00000005406	Prpf6	100	96.145	ENSXETG00000012054	prpf6	88	96.145	Xenopus_tropicalis
ENSDORG00000005406	Prpf6	100	92.874	ENSXCOG00000008082	prpf6	87	92.874	Xiphophorus_couchianus
ENSDORG00000005406	Prpf6	100	92.874	ENSXMAG00000015581	prpf6	87	92.874	Xiphophorus_maculatus