EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005434 (Gene tree)
Gene ID: 105993703
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 64562 bases
Position: chrKN672445.1:5218381-5282942
Accession: 105993703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005081	XRN_N	PF03159.18	4.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005434	-	2796	XM_013027042	ENSDORP00000005081	931 (aa)	XP_012882496	UPI000BAD2623

Gene Model

Click here to download ENSDORG00000005434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005434	Xrn2	100	95.684	ENSG00000088930	XRN2	100	95.684	Homo_sapiens
ENSDORG00000005434	Xrn2	97	70.426	ENSAPOG00000009818	xrn2	100	69.215	Acanthochromis_polyacanthus
ENSDORG00000005434	Xrn2	100	95.053	ENSAMEG00000012581	XRN2	100	95.053	Ailuropoda_melanoleuca
ENSDORG00000005434	Xrn2	90	71.231	ENSACIG00000015047	xrn2	95	74.472	Amphilophus_citrinellus
ENSDORG00000005434	Xrn2	97	70.940	ENSAOCG00000023632	xrn2	100	69.746	Amphiprion_ocellaris
ENSDORG00000005434	Xrn2	97	70.776	ENSAPEG00000014871	xrn2	100	69.552	Amphiprion_percula
ENSDORG00000005434	Xrn2	95	70.423	ENSATEG00000001273	xrn2	97	69.873	Anabas_testudineus
ENSDORG00000005434	Xrn2	97	81.916	ENSAPLG00000013869	XRN2	99	82.347	Anas_platyrhynchos
ENSDORG00000005434	Xrn2	100	79.626	ENSACAG00000005565	XRN2	100	79.626	Anolis_carolinensis
ENSDORG00000005434	Xrn2	100	95.474	ENSANAG00000020126	XRN2	100	95.474	Aotus_nancymaae
ENSDORG00000005434	Xrn2	90	72.139	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSDORG00000005434	Xrn2	100	70.397	ENSAMXG00000018301	xrn2	100	70.397	Astyanax_mexicanus
ENSDORG00000005434	Xrn2	100	95.386	ENSBTAG00000011304	XRN2	100	95.386	Bos_taurus
ENSDORG00000005434	Xrn2	86	55.465	WBGene00006964	xrn-2	89	54.864	Caenorhabditis_elegans
ENSDORG00000005434	Xrn2	100	95.579	ENSCJAG00000005611	XRN2	100	95.579	Callithrix_jacchus
ENSDORG00000005434	Xrn2	100	95.263	ENSCAFG00000005185	XRN2	100	95.263	Canis_familiaris
ENSDORG00000005434	Xrn2	100	95.263	ENSCAFG00020027479	XRN2	100	95.263	Canis_lupus_dingo
ENSDORG00000005434	Xrn2	100	94.261	ENSCHIG00000006921	XRN2	100	94.261	Capra_hircus
ENSDORG00000005434	Xrn2	100	94.316	ENSTSYG00000008315	XRN2	100	94.316	Carlito_syrichta
ENSDORG00000005434	Xrn2	97	79.504	ENSCAPG00000010773	XRN2	99	79.504	Cavia_aperea
ENSDORG00000005434	Xrn2	100	94.947	ENSCPOG00000009407	XRN2	100	94.947	Cavia_porcellus
ENSDORG00000005434	Xrn2	100	95.895	ENSCATG00000040350	XRN2	100	95.895	Cercocebus_atys
ENSDORG00000005434	Xrn2	100	95.579	ENSCLAG00000013419	XRN2	100	95.579	Chinchilla_lanigera
ENSDORG00000005434	Xrn2	100	95.895	ENSCSAG00000011094	XRN2	100	95.895	Chlorocebus_sabaeus
ENSDORG00000005434	Xrn2	67	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSDORG00000005434	Xrn2	100	83.333	ENSCPBG00000023533	XRN2	100	83.958	Chrysemys_picta_bellii
ENSDORG00000005434	Xrn2	86	59.427	ENSCING00000022336	-	100	59.785	Ciona_intestinalis
ENSDORG00000005434	Xrn2	98	52.632	ENSCSAVG00000011217	-	100	61.217	Ciona_savignyi
ENSDORG00000005434	Xrn2	100	95.895	ENSCANG00000040240	XRN2	100	95.895	Colobus_angolensis_palliatus
ENSDORG00000005434	Xrn2	98	94.403	ENSCGRG00001010676	Xrn2	99	94.403	Cricetulus_griseus_chok1gshd
ENSDORG00000005434	Xrn2	97	93.420	ENSCGRG00000006378	Xrn2	99	93.420	Cricetulus_griseus_crigri
ENSDORG00000005434	Xrn2	55	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSDORG00000005434	Xrn2	89	70.575	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSDORG00000005434	Xrn2	100	68.891	ENSDARG00000101900	xrn2	96	77.820	Danio_rerio
ENSDORG00000005434	Xrn2	100	94.421	ENSDNOG00000001895	XRN2	100	94.421	Dasypus_novemcinctus
ENSDORG00000005434	Xrn2	86	56.606	FBgn0031868	Rat1	87	56.485	Drosophila_melanogaster
ENSDORG00000005434	Xrn2	100	82.211	ENSETEG00000001740	XRN2	100	82.211	Echinops_telfairi
ENSDORG00000005434	Xrn2	84	70.909	ENSEBUG00000016136	xrn2	100	70.909	Eptatretus_burgeri
ENSDORG00000005434	Xrn2	100	94.947	ENSEASG00005002484	XRN2	100	94.947	Equus_asinus_asinus
ENSDORG00000005434	Xrn2	99	95.037	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSDORG00000005434	Xrn2	77	100.000	ENSEEUG00000009265	XRN2	76	100.000	Erinaceus_europaeus
ENSDORG00000005434	Xrn2	100	68.846	ENSELUG00000000552	xrn2	100	69.672	Esox_lucius
ENSDORG00000005434	Xrn2	100	95.053	ENSFCAG00000007970	XRN2	100	95.053	Felis_catus
ENSDORG00000005434	Xrn2	100	81.447	ENSFALG00000004508	XRN2	100	81.866	Ficedula_albicollis
ENSDORG00000005434	Xrn2	100	95.263	ENSFDAG00000016311	XRN2	100	95.263	Fukomys_damarensis
ENSDORG00000005434	Xrn2	55	69.656	ENSFHEG00000013039	xrn2	98	69.656	Fundulus_heteroclitus
ENSDORG00000005434	Xrn2	86	71.932	ENSGMOG00000013436	xrn2	100	71.932	Gadus_morhua
ENSDORG00000005434	Xrn2	100	81.675	ENSGALG00000008372	XRN2	100	81.675	Gallus_gallus
ENSDORG00000005434	Xrn2	89	72.674	ENSGAFG00000014284	xrn2	92	78.832	Gambusia_affinis
ENSDORG00000005434	Xrn2	87	73.317	ENSGACG00000011870	xrn2	96	77.992	Gasterosteus_aculeatus
ENSDORG00000005434	Xrn2	100	83.125	ENSGAGG00000004884	XRN2	100	83.750	Gopherus_agassizii
ENSDORG00000005434	Xrn2	100	95.789	ENSGGOG00000013738	XRN2	100	95.789	Gorilla_gorilla
ENSDORG00000005434	Xrn2	55	74.472	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSDORG00000005434	Xrn2	100	94.105	ENSHGLG00000014831	XRN2	100	94.000	Heterocephalus_glaber_female
ENSDORG00000005434	Xrn2	100	94.105	ENSHGLG00100013130	XRN2	100	94.000	Heterocephalus_glaber_male
ENSDORG00000005434	Xrn2	99	66.700	ENSHCOG00000011994	xrn2	99	67.713	Hippocampus_comes
ENSDORG00000005434	Xrn2	100	68.909	ENSIPUG00000006639	xrn2	100	68.909	Ictalurus_punctatus
ENSDORG00000005434	Xrn2	100	95.789	ENSSTOG00000000589	XRN2	100	95.789	Ictidomys_tridecemlineatus
ENSDORG00000005434	Xrn2	100	94.632	ENSJJAG00000022128	Xrn2	100	94.632	Jaculus_jaculus
ENSDORG00000005434	Xrn2	55	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSDORG00000005434	Xrn2	93	75.415	ENSLACG00000008307	XRN2	99	77.914	Latimeria_chalumnae
ENSDORG00000005434	Xrn2	99	72.176	ENSLOCG00000016874	xrn2	100	72.176	Lepisosteus_oculatus
ENSDORG00000005434	Xrn2	100	93.789	ENSLAFG00000014624	XRN2	100	93.789	Loxodonta_africana
ENSDORG00000005434	Xrn2	100	95.895	ENSMFAG00000038122	XRN2	100	95.895	Macaca_fascicularis
ENSDORG00000005434	Xrn2	100	95.895	ENSMMUG00000011405	XRN2	100	95.895	Macaca_mulatta
ENSDORG00000005434	Xrn2	100	96.000	ENSMNEG00000040626	XRN2	100	96.000	Macaca_nemestrina
ENSDORG00000005434	Xrn2	100	95.789	ENSMLEG00000041897	XRN2	100	95.789	Mandrillus_leucophaeus
ENSDORG00000005434	Xrn2	95	71.382	ENSMAMG00000008633	xrn2	98	70.242	Mastacembelus_armatus
ENSDORG00000005434	Xrn2	90	74.104	ENSMZEG00005022362	xrn2	97	74.104	Maylandia_zebra
ENSDORG00000005434	Xrn2	99	80.208	ENSMGAG00000003196	XRN2	99	80.208	Meleagris_gallopavo
ENSDORG00000005434	Xrn2	100	94.526	ENSMAUG00000021842	Xrn2	100	94.526	Mesocricetus_auratus
ENSDORG00000005434	Xrn2	100	94.632	ENSMICG00000008126	XRN2	100	94.632	Microcebus_murinus
ENSDORG00000005434	Xrn2	100	93.368	ENSMOCG00000012588	Xrn2	100	93.368	Microtus_ochrogaster
ENSDORG00000005434	Xrn2	89	72.509	ENSMMOG00000017576	xrn2	96	74.242	Mola_mola
ENSDORG00000005434	Xrn2	100	89.684	ENSMODG00000006163	XRN2	100	89.684	Monodelphis_domestica
ENSDORG00000005434	Xrn2	91	71.011	ENSMALG00000011355	xrn2	95	76.099	Monopterus_albus
ENSDORG00000005434	Xrn2	100	93.270	MGP_CAROLIEiJ_G0024400	Xrn2	100	93.270	Mus_caroli
ENSDORG00000005434	Xrn2	100	93.481	ENSMUSG00000027433	Xrn2	100	93.481	Mus_musculus
ENSDORG00000005434	Xrn2	100	93.270	MGP_PahariEiJ_G0025843	Xrn2	100	93.270	Mus_pahari
ENSDORG00000005434	Xrn2	100	93.481	MGP_SPRETEiJ_G0025318	Xrn2	100	93.481	Mus_spretus
ENSDORG00000005434	Xrn2	100	93.485	ENSMPUG00000001198	XRN2	93	93.485	Mustela_putorius_furo
ENSDORG00000005434	Xrn2	100	95.158	ENSMLUG00000001536	XRN2	100	95.158	Myotis_lucifugus
ENSDORG00000005434	Xrn2	100	95.368	ENSNGAG00000018138	Xrn2	100	95.368	Nannospalax_galili
ENSDORG00000005434	Xrn2	90	74.306	ENSNBRG00000008062	xrn2	96	76.667	Neolamprologus_brichardi
ENSDORG00000005434	Xrn2	100	95.789	ENSNLEG00000009991	XRN2	100	95.789	Nomascus_leucogenys
ENSDORG00000005434	Xrn2	65	97.778	ENSMEUG00000008622	-	65	97.778	Notamacropus_eugenii
ENSDORG00000005434	Xrn2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSDORG00000005434	Xrn2	98	86.516	ENSODEG00000000860	-	99	86.947	Octodon_degus
ENSDORG00000005434	Xrn2	100	95.158	ENSODEG00000010745	-	100	95.158	Octodon_degus
ENSDORG00000005434	Xrn2	100	70.103	ENSONIG00000018720	xrn2	100	70.309	Oreochromis_niloticus
ENSDORG00000005434	Xrn2	100	89.916	ENSOANG00000015673	XRN2	100	89.916	Ornithorhynchus_anatinus
ENSDORG00000005434	Xrn2	100	95.789	ENSOCUG00000013468	XRN2	100	95.789	Oryctolagus_cuniculus
ENSDORG00000005434	Xrn2	98	69.782	ENSORLG00000017213	xrn2	97	74.134	Oryzias_latipes
ENSDORG00000005434	Xrn2	98	69.782	ENSORLG00020001824	xrn2	100	69.286	Oryzias_latipes_hni
ENSDORG00000005434	Xrn2	98	69.678	ENSORLG00015019747	xrn2	100	69.286	Oryzias_latipes_hsok
ENSDORG00000005434	Xrn2	89	73.179	ENSOMEG00000019820	xrn2	100	68.384	Oryzias_melastigma
ENSDORG00000005434	Xrn2	100	94.217	ENSOGAG00000001068	XRN2	100	94.217	Otolemur_garnettii
ENSDORG00000005434	Xrn2	97	93.521	ENSOARG00000004443	XRN2	100	93.521	Ovis_aries
ENSDORG00000005434	Xrn2	100	95.789	ENSPPAG00000033549	XRN2	100	95.789	Pan_paniscus
ENSDORG00000005434	Xrn2	100	95.053	ENSPPRG00000008732	XRN2	100	95.053	Panthera_pardus
ENSDORG00000005434	Xrn2	97	94.919	ENSPTIG00000015683	XRN2	97	94.919	Panthera_tigris_altaica
ENSDORG00000005434	Xrn2	100	95.789	ENSPTRG00000013308	XRN2	100	95.789	Pan_troglodytes
ENSDORG00000005434	Xrn2	100	95.895	ENSPANG00000018088	XRN2	100	95.895	Papio_anubis
ENSDORG00000005434	Xrn2	100	69.498	ENSPKIG00000016889	xrn2	100	69.601	Paramormyrops_kingsleyae
ENSDORG00000005434	Xrn2	80	85.807	ENSPSIG00000014666	XRN2	100	85.807	Pelodiscus_sinensis
ENSDORG00000005434	Xrn2	100	93.368	ENSPEMG00000000111	Xrn2	100	93.368	Peromyscus_maniculatus_bairdii
ENSDORG00000005434	Xrn2	100	68.951	ENSPFOG00000004182	xrn2	99	69.183	Poecilia_formosa
ENSDORG00000005434	Xrn2	89	73.372	ENSPLAG00000007351	xrn2	96	73.372	Poecilia_latipinna
ENSDORG00000005434	Xrn2	94	67.137	ENSPMEG00000011798	xrn2	99	67.791	Poecilia_mexicana
ENSDORG00000005434	Xrn2	89	73.372	ENSPREG00000012452	xrn2	99	71.991	Poecilia_reticulata
ENSDORG00000005434	Xrn2	100	95.368	ENSPPYG00000010755	XRN2	100	95.368	Pongo_abelii
ENSDORG00000005434	Xrn2	100	88.971	ENSPCAG00000011191	XRN2	100	88.971	Procavia_capensis
ENSDORG00000005434	Xrn2	100	91.300	ENSPCOG00000016468	XRN2	100	91.300	Propithecus_coquereli
ENSDORG00000005434	Xrn2	92	86.930	ENSPVAG00000004596	XRN2	93	86.930	Pteropus_vampyrus
ENSDORG00000005434	Xrn2	90	72.139	ENSPNYG00000001765	xrn2	97	72.139	Pundamilia_nyererei
ENSDORG00000005434	Xrn2	100	70.510	ENSPNAG00000010956	xrn2	99	70.510	Pygocentrus_nattereri
ENSDORG00000005434	Xrn2	100	94.111	ENSRNOG00000011785	Xrn2	100	94.111	Rattus_norvegicus
ENSDORG00000005434	Xrn2	86	96.210	ENSRBIG00000036193	XRN2	100	96.210	Rhinopithecus_bieti
ENSDORG00000005434	Xrn2	100	95.895	ENSRROG00000044400	XRN2	90	95.895	Rhinopithecus_roxellana
ENSDORG00000005434	Xrn2	75	53.608	YOR048C	RAT1	62	53.846	Saccharomyces_cerevisiae
ENSDORG00000005434	Xrn2	100	95.789	ENSSBOG00000021014	XRN2	100	95.789	Saimiri_boliviensis_boliviensis
ENSDORG00000005434	Xrn2	100	70.661	ENSSFOG00015001091	xrn2	100	70.661	Scleropages_formosus
ENSDORG00000005434	Xrn2	89	73.279	ENSSMAG00000007834	xrn2	100	67.680	Scophthalmus_maximus
ENSDORG00000005434	Xrn2	91	70.895	ENSSDUG00000012802	xrn2	99	71.234	Seriola_dumerili
ENSDORG00000005434	Xrn2	93	72.316	ENSSLDG00000021273	xrn2	100	72.316	Seriola_lalandi_dorsalis
ENSDORG00000005434	Xrn2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSDORG00000005434	Xrn2	98	78.671	ENSSPUG00000005485	XRN2	96	78.671	Sphenodon_punctatus
ENSDORG00000005434	Xrn2	100	69.294	ENSSPAG00000016027	xrn2	99	69.294	Stegastes_partitus
ENSDORG00000005434	Xrn2	100	93.053	ENSSSCG00000007109	XRN2	100	93.053	Sus_scrofa
ENSDORG00000005434	Xrn2	100	80.167	ENSTGUG00000007535	XRN2	100	80.585	Taeniopygia_guttata
ENSDORG00000005434	Xrn2	100	67.003	ENSTRUG00000015489	xrn2	100	67.475	Takifugu_rubripes
ENSDORG00000005434	Xrn2	100	69.886	ENSTNIG00000010712	xrn2	100	69.886	Tetraodon_nigroviridis
ENSDORG00000005434	Xrn2	100	94.842	ENSTBEG00000004119	XRN2	100	94.842	Tupaia_belangeri
ENSDORG00000005434	Xrn2	93	97.477	ENSTTRG00000009087	XRN2	93	97.477	Tursiops_truncatus
ENSDORG00000005434	Xrn2	100	95.263	ENSUAMG00000024634	XRN2	100	95.263	Ursus_americanus
ENSDORG00000005434	Xrn2	97	94.919	ENSUMAG00000004012	XRN2	95	94.919	Ursus_maritimus
ENSDORG00000005434	Xrn2	89	86.509	ENSVPAG00000010694	XRN2	91	86.509	Vicugna_pacos
ENSDORG00000005434	Xrn2	100	95.263	ENSVVUG00000012178	XRN2	100	95.263	Vulpes_vulpes
ENSDORG00000005434	Xrn2	100	73.097	ENSXETG00000023501	xrn2	100	73.514	Xenopus_tropicalis
ENSDORG00000005434	Xrn2	100	67.520	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus