EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005448 (Gene tree)
Gene ID: 105997123
Gene Symbol: Rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 20634 bases
Position: chrKN672485.1:3777591-3798224
Accession: 105997123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005093	RTC	PF01137.21	1.8e-87	1	1
ENSDORP00000005093	RTC_insert	PF05189.13	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005446	-	1488	XM_013031436	ENSDORP00000005093	366 (aa)	XP_012886890	A0A1S3GDV7

Gene Model

Click here to download ENSDORG00000005448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005448	Rtca	100	92.350	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSDORG00000005448	Rtca	99	71.468	ENSAPOG00000001345	rtca	98	71.468	Acanthochromis_polyacanthus
ENSDORG00000005448	Rtca	73	93.309	ENSAMEG00000008855	RTCA	100	93.309	Ailuropoda_melanoleuca
ENSDORG00000005448	Rtca	99	71.745	ENSACIG00000019643	rtca	99	71.745	Amphilophus_citrinellus
ENSDORG00000005448	Rtca	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSDORG00000005448	Rtca	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSDORG00000005448	Rtca	100	69.399	ENSATEG00000006315	rtca	100	69.399	Anabas_testudineus
ENSDORG00000005448	Rtca	96	80.791	ENSAPLG00000015430	RTCA	100	80.791	Anas_platyrhynchos
ENSDORG00000005448	Rtca	100	92.077	ENSANAG00000025446	RTCA	100	92.077	Aotus_nancymaae
ENSDORG00000005448	Rtca	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSDORG00000005448	Rtca	100	71.585	ENSAMXG00000043271	rtca	100	71.585	Astyanax_mexicanus
ENSDORG00000005448	Rtca	100	93.989	ENSBTAG00000006321	RTCA	100	93.989	Bos_taurus
ENSDORG00000005448	Rtca	100	92.077	ENSCJAG00000003398	RTCA	100	92.077	Callithrix_jacchus
ENSDORG00000005448	Rtca	100	93.989	ENSCAFG00000020010	RTCA	68	93.989	Canis_familiaris
ENSDORG00000005448	Rtca	100	93.989	ENSCAFG00020011528	RTCA	57	93.989	Canis_lupus_dingo
ENSDORG00000005448	Rtca	100	93.716	ENSCHIG00000018937	RTCA	100	93.716	Capra_hircus
ENSDORG00000005448	Rtca	100	92.896	ENSTSYG00000011305	RTCA	100	92.896	Carlito_syrichta
ENSDORG00000005448	Rtca	100	91.803	ENSCCAG00000021844	RTCA	100	91.803	Cebus_capucinus
ENSDORG00000005448	Rtca	100	89.446	ENSCATG00000019364	RTCA	100	91.909	Cercocebus_atys
ENSDORG00000005448	Rtca	87	92.429	ENSCLAG00000006125	RTCA	100	92.429	Chinchilla_lanigera
ENSDORG00000005448	Rtca	100	92.623	ENSCSAG00000001509	RTCA	100	92.623	Chlorocebus_sabaeus
ENSDORG00000005448	Rtca	99	93.681	ENSCHOG00000005211	RTCA	99	93.681	Choloepus_hoffmanni
ENSDORG00000005448	Rtca	100	82.787	ENSCPBG00000026658	RTCA	100	82.787	Chrysemys_picta_bellii
ENSDORG00000005448	Rtca	98	56.389	ENSCING00000007875	-	98	56.389	Ciona_intestinalis
ENSDORG00000005448	Rtca	98	55.000	ENSCSAVG00000007269	-	98	55.000	Ciona_savignyi
ENSDORG00000005448	Rtca	100	92.350	ENSCANG00000040106	RTCA	100	92.350	Colobus_angolensis_palliatus
ENSDORG00000005448	Rtca	73	95.167	ENSCGRG00001013163	Rtca	85	95.167	Cricetulus_griseus_chok1gshd
ENSDORG00000005448	Rtca	98	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSDORG00000005448	Rtca	100	59.016	ENSCVAG00000021809	rtca	100	59.016	Cyprinodon_variegatus
ENSDORG00000005448	Rtca	100	72.404	ENSDARG00000002215	rtca	100	72.404	Danio_rerio
ENSDORG00000005448	Rtca	99	92.857	ENSDNOG00000000456	RTCA	99	92.857	Dasypus_novemcinctus
ENSDORG00000005448	Rtca	99	38.674	FBgn0025630	Rtca	99	38.674	Drosophila_melanogaster
ENSDORG00000005448	Rtca	95	55.367	ENSEBUG00000008556	rtca	97	55.367	Eptatretus_burgeri
ENSDORG00000005448	Rtca	100	92.896	ENSEASG00005015926	RTCA	100	92.896	Equus_asinus_asinus
ENSDORG00000005448	Rtca	100	92.896	ENSECAG00000019831	RTCA	100	92.896	Equus_caballus
ENSDORG00000005448	Rtca	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSDORG00000005448	Rtca	99	72.299	ENSELUG00000003741	rtca	99	72.299	Esox_lucius
ENSDORG00000005448	Rtca	100	93.989	ENSFCAG00000024460	RTCA	100	93.989	Felis_catus
ENSDORG00000005448	Rtca	93	82.353	ENSFALG00000002443	RTCA	91	82.353	Ficedula_albicollis
ENSDORG00000005448	Rtca	100	92.350	ENSFDAG00000012070	-	100	92.350	Fukomys_damarensis
ENSDORG00000005448	Rtca	98	71.547	ENSFDAG00000016084	-	100	71.547	Fukomys_damarensis
ENSDORG00000005448	Rtca	72	60.687	ENSFHEG00000002868	rtca	93	68.182	Fundulus_heteroclitus
ENSDORG00000005448	Rtca	100	67.760	ENSGMOG00000013264	rtca	100	67.760	Gadus_morhua
ENSDORG00000005448	Rtca	100	82.787	ENSGALG00000005277	RTCA	100	82.787	Gallus_gallus
ENSDORG00000005448	Rtca	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSDORG00000005448	Rtca	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSDORG00000005448	Rtca	80	83.276	ENSGAGG00000023306	RTCA	100	83.276	Gopherus_agassizii
ENSDORG00000005448	Rtca	100	91.530	ENSGGOG00000044018	-	100	91.530	Gorilla_gorilla
ENSDORG00000005448	Rtca	100	92.350	ENSGGOG00000009546	-	100	92.350	Gorilla_gorilla
ENSDORG00000005448	Rtca	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSDORG00000005448	Rtca	100	91.803	ENSHGLG00000002617	RTCA	100	91.803	Heterocephalus_glaber_female
ENSDORG00000005448	Rtca	100	91.803	ENSHGLG00100006056	RTCA	100	91.803	Heterocephalus_glaber_male
ENSDORG00000005448	Rtca	100	64.754	ENSHCOG00000020628	rtca	88	65.374	Hippocampus_comes
ENSDORG00000005448	Rtca	100	72.131	ENSIPUG00000024803	rtca	100	72.131	Ictalurus_punctatus
ENSDORG00000005448	Rtca	100	81.744	ENSSTOG00000033099	-	100	81.744	Ictidomys_tridecemlineatus
ENSDORG00000005448	Rtca	100	85.792	ENSSTOG00000013528	-	100	85.792	Ictidomys_tridecemlineatus
ENSDORG00000005448	Rtca	100	66.940	ENSJJAG00000016178	Rtca	100	66.940	Jaculus_jaculus
ENSDORG00000005448	Rtca	99	72.299	ENSKMAG00000006651	rtca	98	72.299	Kryptolebias_marmoratus
ENSDORG00000005448	Rtca	99	70.360	ENSLBEG00000028971	rtca	99	70.360	Labrus_bergylta
ENSDORG00000005448	Rtca	88	70.093	ENSLBEG00000002448	-	99	70.093	Labrus_bergylta
ENSDORG00000005448	Rtca	100	77.596	ENSLACG00000013666	RTCA	100	77.596	Latimeria_chalumnae
ENSDORG00000005448	Rtca	100	74.044	ENSLOCG00000000093	rtca	99	74.044	Lepisosteus_oculatus
ENSDORG00000005448	Rtca	100	91.803	ENSLAFG00000001473	RTCA	100	91.803	Loxodonta_africana
ENSDORG00000005448	Rtca	100	92.623	ENSMFAG00000034132	RTCA	100	92.623	Macaca_fascicularis
ENSDORG00000005448	Rtca	100	92.623	ENSMMUG00000019105	RTCA	100	92.623	Macaca_mulatta
ENSDORG00000005448	Rtca	84	91.909	ENSMNEG00000037163	RTCA	100	91.909	Macaca_nemestrina
ENSDORG00000005448	Rtca	100	75.956	ENSMLEG00000042151	RTCA	100	75.956	Mandrillus_leucophaeus
ENSDORG00000005448	Rtca	100	72.404	ENSMAMG00000016536	rtca	100	72.404	Mastacembelus_armatus
ENSDORG00000005448	Rtca	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSDORG00000005448	Rtca	87	82.132	ENSMGAG00000006892	RTCA	99	82.132	Meleagris_gallopavo
ENSDORG00000005448	Rtca	100	94.262	ENSMAUG00000008488	Rtca	100	94.262	Mesocricetus_auratus
ENSDORG00000005448	Rtca	84	93.204	ENSMICG00000008643	RTCA	100	93.204	Microcebus_murinus
ENSDORG00000005448	Rtca	100	95.355	ENSMOCG00000016660	Rtca	100	95.355	Microtus_ochrogaster
ENSDORG00000005448	Rtca	84	72.168	ENSMMOG00000007750	rtca	100	72.168	Mola_mola
ENSDORG00000005448	Rtca	100	89.344	ENSMODG00000003557	RTCA	100	89.344	Monodelphis_domestica
ENSDORG00000005448	Rtca	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSDORG00000005448	Rtca	100	93.989	MGP_CAROLIEiJ_G0025565	Rtca	100	93.989	Mus_caroli
ENSDORG00000005448	Rtca	100	93.443	ENSMUSG00000000339	Rtca	100	93.443	Mus_musculus
ENSDORG00000005448	Rtca	100	94.262	MGP_PahariEiJ_G0027011	Rtca	100	94.262	Mus_pahari
ENSDORG00000005448	Rtca	100	93.716	MGP_SPRETEiJ_G0026515	Rtca	100	93.716	Mus_spretus
ENSDORG00000005448	Rtca	100	94.536	ENSMPUG00000012119	RTCA	100	94.536	Mustela_putorius_furo
ENSDORG00000005448	Rtca	100	88.011	ENSMLUG00000009922	RTCA	100	88.011	Myotis_lucifugus
ENSDORG00000005448	Rtca	100	93.989	ENSNGAG00000011540	Rtca	99	93.989	Nannospalax_galili
ENSDORG00000005448	Rtca	100	70.492	ENSNBRG00000003062	rtca	99	70.492	Neolamprologus_brichardi
ENSDORG00000005448	Rtca	100	92.350	ENSNLEG00000031426	RTCA	100	92.350	Nomascus_leucogenys
ENSDORG00000005448	Rtca	58	90.244	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSDORG00000005448	Rtca	73	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSDORG00000005448	Rtca	95	92.816	ENSODEG00000006990	RTCA	96	92.877	Octodon_degus
ENSDORG00000005448	Rtca	100	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSDORG00000005448	Rtca	87	85.489	ENSOANG00000012055	RTCA	98	85.489	Ornithorhynchus_anatinus
ENSDORG00000005448	Rtca	100	93.169	ENSOCUG00000014247	RTCA	100	93.169	Oryctolagus_cuniculus
ENSDORG00000005448	Rtca	100	70.765	ENSORLG00000013605	rtca	100	70.765	Oryzias_latipes
ENSDORG00000005448	Rtca	100	70.765	ENSORLG00020001904	rtca	100	70.765	Oryzias_latipes_hni
ENSDORG00000005448	Rtca	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSDORG00000005448	Rtca	100	71.585	ENSOMEG00000000756	rtca	100	71.585	Oryzias_melastigma
ENSDORG00000005448	Rtca	100	84.426	ENSOGAG00000005627	RTCA	100	84.426	Otolemur_garnettii
ENSDORG00000005448	Rtca	87	92.453	ENSOARG00000018122	RTCA	100	92.453	Ovis_aries
ENSDORG00000005448	Rtca	100	89.446	ENSPPAG00000035119	RTCA	100	92.233	Pan_paniscus
ENSDORG00000005448	Rtca	100	93.716	ENSPPRG00000000350	RTCA	100	93.716	Panthera_pardus
ENSDORG00000005448	Rtca	100	93.716	ENSPTIG00000012816	RTCA	100	93.716	Panthera_tigris_altaica
ENSDORG00000005448	Rtca	100	88.918	ENSPTRG00000001004	RTCA	100	91.586	Pan_troglodytes
ENSDORG00000005448	Rtca	100	92.623	ENSPANG00000000346	RTCA	100	92.623	Papio_anubis
ENSDORG00000005448	Rtca	100	72.951	ENSPKIG00000001653	rtca	100	72.951	Paramormyrops_kingsleyae
ENSDORG00000005448	Rtca	100	83.060	ENSPSIG00000011408	RTCA	100	83.060	Pelodiscus_sinensis
ENSDORG00000005448	Rtca	100	93.989	ENSPEMG00000018582	Rtca	100	93.989	Peromyscus_maniculatus_bairdii
ENSDORG00000005448	Rtca	100	58.038	ENSPMAG00000009110	rtca	100	58.038	Petromyzon_marinus
ENSDORG00000005448	Rtca	100	89.071	ENSPCIG00000007684	RTCA	100	89.071	Phascolarctos_cinereus
ENSDORG00000005448	Rtca	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSDORG00000005448	Rtca	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSDORG00000005448	Rtca	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSDORG00000005448	Rtca	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSDORG00000005448	Rtca	100	92.350	ENSPPYG00000001115	RTCA	100	92.350	Pongo_abelii
ENSDORG00000005448	Rtca	100	89.344	ENSPCAG00000005076	RTCA	100	89.344	Procavia_capensis
ENSDORG00000005448	Rtca	100	94.262	ENSPCOG00000005603	RTCA	100	94.262	Propithecus_coquereli
ENSDORG00000005448	Rtca	100	88.918	ENSPVAG00000009478	RTCA	100	88.918	Pteropus_vampyrus
ENSDORG00000005448	Rtca	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSDORG00000005448	Rtca	100	71.585	ENSPNAG00000022270	rtca	100	71.585	Pygocentrus_nattereri
ENSDORG00000005448	Rtca	100	93.989	ENSRNOG00000014575	Rtca	100	93.989	Rattus_norvegicus
ENSDORG00000005448	Rtca	100	88.654	ENSRBIG00000041180	RTCA	100	90.939	Rhinopithecus_bieti
ENSDORG00000005448	Rtca	100	91.803	ENSRROG00000024929	RTCA	100	91.803	Rhinopithecus_roxellana
ENSDORG00000005448	Rtca	100	91.803	ENSSBOG00000028626	RTCA	100	91.803	Saimiri_boliviensis_boliviensis
ENSDORG00000005448	Rtca	100	89.344	ENSSHAG00000001758	RTCA	100	89.344	Sarcophilus_harrisii
ENSDORG00000005448	Rtca	98	69.444	ENSSMAG00000014680	rtca	97	69.444	Scophthalmus_maximus
ENSDORG00000005448	Rtca	98	70.833	ENSSDUG00000015585	rtca	97	70.833	Seriola_dumerili
ENSDORG00000005448	Rtca	96	71.225	ENSSLDG00000018985	rtca	95	71.225	Seriola_lalandi_dorsalis
ENSDORG00000005448	Rtca	87	85.174	ENSSARG00000013993	RTCA	100	85.174	Sorex_araneus
ENSDORG00000005448	Rtca	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSDORG00000005448	Rtca	100	95.082	ENSSSCG00000006865	RTCA	100	95.082	Sus_scrofa
ENSDORG00000005448	Rtca	100	82.787	ENSTGUG00000005154	RTCA	100	82.787	Taeniopygia_guttata
ENSDORG00000005448	Rtca	100	71.311	ENSTRUG00000008799	rtca	100	71.311	Takifugu_rubripes
ENSDORG00000005448	Rtca	100	72.678	ENSTNIG00000004725	rtca	100	72.678	Tetraodon_nigroviridis
ENSDORG00000005448	Rtca	59	80.000	ENSTBEG00000000943	RTCA	82	64.706	Tupaia_belangeri
ENSDORG00000005448	Rtca	100	88.918	ENSTTRG00000015327	RTCA	100	88.918	Tursiops_truncatus
ENSDORG00000005448	Rtca	94	91.545	ENSUAMG00000017265	RTCA	96	91.545	Ursus_americanus
ENSDORG00000005448	Rtca	100	93.443	ENSUMAG00000007881	RTCA	100	93.443	Ursus_maritimus
ENSDORG00000005448	Rtca	87	83.281	ENSVPAG00000001039	RTCA	84	83.281	Vicugna_pacos
ENSDORG00000005448	Rtca	100	93.716	ENSVVUG00000022041	RTCA	68	93.716	Vulpes_vulpes
ENSDORG00000005448	Rtca	99	66.027	ENSXETG00000031661	RTCA	99	66.027	Xenopus_tropicalis
ENSDORG00000005448	Rtca	100	61.749	ENSXCOG00000008002	rtca	100	61.749	Xiphophorus_couchianus
ENSDORG00000005448	Rtca	100	71.311	ENSXMAG00000005482	rtca	99	71.311	Xiphophorus_maculatus