EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005496 (Gene tree)
Gene ID: -
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 23711 bases
Position: chrKN672449.1:2738122-2761832
Accession: 105993999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005141	Nop52	PF05997.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005496	-	1989	XM_013027402	ENSDORP00000005141	662 (aa)	XP_012882856	UPI000BAD24CB

Gene Model

Click here to download ENSDORG00000005496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005496	Rrp1b	100	62.011	ENSG00000160208	RRP1B	93	61.313	Homo_sapiens
ENSDORG00000005496	Rrp1b	50	46.743	ENSAOCG00000017894	-	87	54.639	Amphiprion_ocellaris
ENSDORG00000005496	Rrp1b	100	61.506	ENSANAG00000034889	RRP1B	93	61.088	Aotus_nancymaae
ENSDORG00000005496	Rrp1b	100	55.524	ENSBTAG00000017418	RRP1B	98	50.143	Bos_taurus
ENSDORG00000005496	Rrp1b	100	60.280	ENSCJAG00000017077	RRP1B	93	59.860	Callithrix_jacchus
ENSDORG00000005496	Rrp1b	100	58.228	ENSCAFG00000010621	RRP1B	98	58.228	Canis_familiaris
ENSDORG00000005496	Rrp1b	100	58.368	ENSCAFG00020018901	RRP1B	93	58.368	Canis_lupus_dingo
ENSDORG00000005496	Rrp1b	100	56.011	ENSCHIG00000021519	RRP1B	93	55.446	Capra_hircus
ENSDORG00000005496	Rrp1b	100	55.977	ENSCPOG00000002396	RRP1B	100	53.219	Cavia_porcellus
ENSDORG00000005496	Rrp1b	100	61.453	ENSCCAG00000029384	RRP1B	93	60.754	Cebus_capucinus
ENSDORG00000005496	Rrp1b	100	61.732	ENSCATG00000017423	RRP1B	93	60.894	Cercocebus_atys
ENSDORG00000005496	Rrp1b	100	54.899	ENSCLAG00000005622	RRP1B	93	54.228	Chinchilla_lanigera
ENSDORG00000005496	Rrp1b	100	61.958	ENSCSAG00000007961	RRP1B	93	61.119	Chlorocebus_sabaeus
ENSDORG00000005496	Rrp1b	100	61.592	ENSCANG00000040952	RRP1B	93	60.754	Colobus_angolensis_palliatus
ENSDORG00000005496	Rrp1b	100	58.650	ENSCGRG00001010889	-	93	58.368	Cricetulus_griseus_chok1gshd
ENSDORG00000005496	Rrp1b	100	58.924	ENSCGRG00001023882	-	93	58.640	Cricetulus_griseus_chok1gshd
ENSDORG00000005496	Rrp1b	100	58.650	ENSCGRG00000001553	Rrp1b	96	58.368	Cricetulus_griseus_crigri
ENSDORG00000005496	Rrp1b	52	53.061	ENSCSEG00000020711	-	63	53.061	Cynoglossus_semilaevis
ENSDORG00000005496	Rrp1b	50	46.132	ENSDNOG00000019880	RRP1	60	52.985	Dasypus_novemcinctus
ENSDORG00000005496	Rrp1b	100	55.028	ENSDNOG00000032774	RRP1B	93	54.178	Dasypus_novemcinctus
ENSDORG00000005496	Rrp1b	100	51.114	ENSETEG00000019489	RRP1B	84	78.824	Echinops_telfairi
ENSDORG00000005496	Rrp1b	100	60.420	ENSEASG00005001687	RRP1B	93	59.860	Equus_asinus_asinus
ENSDORG00000005496	Rrp1b	100	59.141	ENSECAG00000018018	RRP1B	93	59.441	Equus_caballus
ENSDORG00000005496	Rrp1b	57	52.000	ENSELUG00000015885	-	73	42.857	Esox_lucius
ENSDORG00000005496	Rrp1b	100	58.416	ENSFCAG00000010272	RRP1B	93	57.143	Felis_catus
ENSDORG00000005496	Rrp1b	100	57.082	ENSFDAG00000010899	RRP1B	93	55.745	Fukomys_damarensis
ENSDORG00000005496	Rrp1b	56	45.455	ENSGMOG00000001953	-	53	45.455	Gadus_morhua
ENSDORG00000005496	Rrp1b	63	47.244	ENSGACG00000001438	rrp1	58	48.760	Gasterosteus_aculeatus
ENSDORG00000005496	Rrp1b	100	61.818	ENSGGOG00000012069	RRP1B	93	61.119	Gorilla_gorilla
ENSDORG00000005496	Rrp1b	100	56.073	ENSHGLG00000004968	RRP1B	94	54.443	Heterocephalus_glaber_female
ENSDORG00000005496	Rrp1b	80	60.997	ENSHGLG00100002232	RRP1B	74	62.752	Heterocephalus_glaber_male
ENSDORG00000005496	Rrp1b	63	45.255	ENSHCOG00000018388	-	50	45.926	Hippocampus_comes
ENSDORG00000005496	Rrp1b	53	47.917	ENSIPUG00000000673	-	55	41.724	Ictalurus_punctatus
ENSDORG00000005496	Rrp1b	100	59.944	ENSSTOG00000011790	RRP1B	90	59.384	Ictidomys_tridecemlineatus
ENSDORG00000005496	Rrp1b	100	56.652	ENSJJAG00000021279	Rrp1b	93	56.571	Jaculus_jaculus
ENSDORG00000005496	Rrp1b	57	49.219	ENSKMAG00000005539	rrp1	59	48.837	Kryptolebias_marmoratus
ENSDORG00000005496	Rrp1b	94	54.613	ENSLAFG00000000766	RRP1B	99	53.125	Loxodonta_africana
ENSDORG00000005496	Rrp1b	100	62.151	ENSMFAG00000039152	RRP1B	93	61.313	Macaca_fascicularis
ENSDORG00000005496	Rrp1b	100	60.057	ENSMMUG00000000104	RRP1B	93	59.773	Macaca_mulatta
ENSDORG00000005496	Rrp1b	100	61.872	ENSMNEG00000034269	RRP1B	93	61.034	Macaca_nemestrina
ENSDORG00000005496	Rrp1b	100	62.151	ENSMLEG00000040044	RRP1B	98	61.313	Mandrillus_leucophaeus
ENSDORG00000005496	Rrp1b	100	61.216	ENSMAUG00000021508	Rrp1b	93	60.029	Mesocricetus_auratus
ENSDORG00000005496	Rrp1b	100	60.388	ENSMICG00000004686	RRP1B	93	60.000	Microcebus_murinus
ENSDORG00000005496	Rrp1b	100	56.899	ENSMOCG00000001117	Rrp1b	93	57.265	Microtus_ochrogaster
ENSDORG00000005496	Rrp1b	100	54.092	ENSMODG00000021033	RRP1B	93	55.062	Monodelphis_domestica
ENSDORG00000005496	Rrp1b	100	59.565	MGP_CAROLIEiJ_G0021376	Rrp1b	93	58.551	Mus_caroli
ENSDORG00000005496	Rrp1b	100	60.116	ENSMUSG00000058392	Rrp1b	93	58.806	Mus_musculus
ENSDORG00000005496	Rrp1b	100	58.393	MGP_PahariEiJ_G0023695	Rrp1b	93	58.967	Mus_pahari
ENSDORG00000005496	Rrp1b	100	57.819	MGP_SPRETEiJ_G0022290	Rrp1b	93	56.999	Mus_spretus
ENSDORG00000005496	Rrp1b	89	53.198	ENSMPUG00000009810	RRP1B	99	52.106	Mustela_putorius_furo
ENSDORG00000005496	Rrp1b	100	58.766	ENSMLUG00000007738	RRP1B	93	57.687	Myotis_lucifugus
ENSDORG00000005496	Rrp1b	100	61.769	ENSNGAG00000021073	Rrp1b	93	60.485	Nannospalax_galili
ENSDORG00000005496	Rrp1b	100	59.775	ENSNLEG00000001490	RRP1B	93	59.072	Nomascus_leucogenys
ENSDORG00000005496	Rrp1b	100	53.748	ENSODEG00000013177	RRP1B	93	53.607	Octodon_degus
ENSDORG00000005496	Rrp1b	100	44.073	ENSOANG00000006470	RRP1B	93	44.924	Ornithorhynchus_anatinus
ENSDORG00000005496	Rrp1b	100	51.890	ENSOCUG00000025931	RRP1B	84	65.414	Oryctolagus_cuniculus
ENSDORG00000005496	Rrp1b	98	53.073	ENSOGAG00000009872	RRP1B	77	70.909	Otolemur_garnettii
ENSDORG00000005496	Rrp1b	100	54.958	ENSOARG00000011314	RRP1B	99	53.258	Ovis_aries
ENSDORG00000005496	Rrp1b	100	62.011	ENSPPAG00000035319	RRP1B	98	61.313	Pan_paniscus
ENSDORG00000005496	Rrp1b	100	58.606	ENSPPRG00000010356	RRP1B	93	57.692	Panthera_pardus
ENSDORG00000005496	Rrp1b	73	68.276	ENSPTIG00000016894	RRP1B	85	68.276	Panthera_tigris_altaica
ENSDORG00000005496	Rrp1b	51	41.226	ENSPTIG00000019473	RRP1	62	46.763	Panthera_tigris_altaica
ENSDORG00000005496	Rrp1b	100	62.151	ENSPTRG00000013958	RRP1B	93	61.453	Pan_troglodytes
ENSDORG00000005496	Rrp1b	100	61.872	ENSPANG00000011090	RRP1B	93	61.034	Papio_anubis
ENSDORG00000005496	Rrp1b	100	59.659	ENSPEMG00000022490	Rrp1b	93	59.517	Peromyscus_maniculatus_bairdii
ENSDORG00000005496	Rrp1b	100	55.556	ENSPCIG00000015513	RRP1B	93	55.278	Phascolarctos_cinereus
ENSDORG00000005496	Rrp1b	52	47.258	ENSPCIG00000015523	-	69	51.242	Phascolarctos_cinereus
ENSDORG00000005496	Rrp1b	100	62.151	ENSPPYG00000011470	RRP1B	93	61.453	Pongo_abelii
ENSDORG00000005496	Rrp1b	90	83.146	ENSPCAG00000013723	RRP1B	90	83.146	Procavia_capensis
ENSDORG00000005496	Rrp1b	100	61.057	ENSPCOG00000017927	RRP1B	93	60.888	Propithecus_coquereli
ENSDORG00000005496	Rrp1b	100	53.007	ENSPVAG00000001436	RRP1B	93	52.448	Pteropus_vampyrus
ENSDORG00000005496	Rrp1b	100	59.143	ENSRNOG00000001194	Rrp1b	93	58.000	Rattus_norvegicus
ENSDORG00000005496	Rrp1b	100	58.543	ENSRBIG00000041689	RRP1B	93	57.703	Rhinopithecus_bieti
ENSDORG00000005496	Rrp1b	100	62.045	ENSRROG00000031499	RRP1B	93	61.204	Rhinopithecus_roxellana
ENSDORG00000005496	Rrp1b	100	59.274	ENSSBOG00000034727	RRP1B	98	58.602	Saimiri_boliviensis_boliviensis
ENSDORG00000005496	Rrp1b	100	54.798	ENSSHAG00000017789	RRP1B	93	55.355	Sarcophilus_harrisii
ENSDORG00000005496	Rrp1b	57	50.000	ENSSMAG00000016847	-	68	43.321	Scophthalmus_maximus
ENSDORG00000005496	Rrp1b	82	66.154	ENSSARG00000003108	-	73	66.154	Sorex_araneus
ENSDORG00000005496	Rrp1b	100	39.724	ENSSPUG00000002834	RRP1B	93	39.011	Sphenodon_punctatus
ENSDORG00000005496	Rrp1b	100	51.061	ENSSSCG00000021698	RRP1B	98	50.708	Sus_scrofa
ENSDORG00000005496	Rrp1b	53	49.462	ENSTNIG00000005053	rrp1	57	49.462	Tetraodon_nigroviridis
ENSDORG00000005496	Rrp1b	83	68.012	ENSTBEG00000000422	RRP1B	94	73.422	Tupaia_belangeri
ENSDORG00000005496	Rrp1b	100	55.949	ENSTTRG00000000723	RRP1B	93	55.241	Tursiops_truncatus
ENSDORG00000005496	Rrp1b	100	56.776	ENSUAMG00000026765	RRP1B	93	55.286	Ursus_americanus
ENSDORG00000005496	Rrp1b	64	73.016	ENSUMAG00000025510	RRP1B	82	75.000	Ursus_maritimus
ENSDORG00000005496	Rrp1b	100	59.129	ENSVVUG00000024509	RRP1B	98	58.287	Vulpes_vulpes
ENSDORG00000005496	Rrp1b	61	45.714	ENSXETG00000013683	rrp1b	60	44.718	Xenopus_tropicalis