EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005584 (Gene tree)
Gene ID: 105997374
Gene Symbol: Srrt
Alias: 2810019G02Rik|Ars2|Asr2
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 9973 bases
Position: chrKN672489.1:2865181-2875153
Accession: 105997374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005225	ARS2	PF04959.13	1.2e-91	1	1
ENSDORP00000020644	ARS2	PF04959.13	3e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028042	-	1545	-	ENSDORP00000020644	514 (aa)	-	UPI000BAD2218
ENSDORT00000005585	-	2613	XM_013031790	ENSDORP00000005225	870 (aa)	XP_012887244	UPI000BAD1FC8

Gene Model

Click here to download ENSDORG00000005584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005584	Srrt	100	96.246	ENSG00000087087	SRRT	100	97.809	Homo_sapiens
ENSDORG00000005584	Srrt	89	72.786	ENSAPOG00000002304	srrt	96	65.349	Acanthochromis_polyacanthus
ENSDORG00000005584	Srrt	100	93.556	ENSAMEG00000014506	SRRT	100	93.556	Ailuropoda_melanoleuca
ENSDORG00000005584	Srrt	89	72.570	ENSACIG00000015795	srrt	85	75.922	Amphilophus_citrinellus
ENSDORG00000005584	Srrt	93	59.509	ENSAOCG00000009189	-	96	57.576	Amphiprion_ocellaris
ENSDORG00000005584	Srrt	89	73.002	ENSAOCG00000009693	srrt	89	76.356	Amphiprion_ocellaris
ENSDORG00000005584	Srrt	93	59.509	ENSAPEG00000020016	-	96	57.576	Amphiprion_percula
ENSDORG00000005584	Srrt	89	72.570	ENSAPEG00000003646	srrt	85	75.922	Amphiprion_percula
ENSDORG00000005584	Srrt	93	58.502	ENSATEG00000003652	-	85	64.632	Anabas_testudineus
ENSDORG00000005584	Srrt	89	70.410	ENSATEG00000014425	srrt	86	74.837	Anabas_testudineus
ENSDORG00000005584	Srrt	95	77.831	ENSACAG00000001014	SRRT	96	77.699	Anolis_carolinensis
ENSDORG00000005584	Srrt	100	96.018	ENSANAG00000031718	SRRT	100	96.018	Aotus_nancymaae
ENSDORG00000005584	Srrt	94	58.333	ENSACLG00000009423	-	96	55.683	Astatotilapia_calliptera
ENSDORG00000005584	Srrt	89	71.274	ENSACLG00000013156	srrt	50	74.620	Astatotilapia_calliptera
ENSDORG00000005584	Srrt	88	72.648	ENSAMXG00000016671	srrt	93	64.535	Astyanax_mexicanus
ENSDORG00000005584	Srrt	100	95.563	ENSBTAG00000001134	SRRT	100	95.563	Bos_taurus
ENSDORG00000005584	Srrt	77	41.882	WBGene00017085	E01A2.2	85	43.368	Caenorhabditis_elegans
ENSDORG00000005584	Srrt	100	95.791	ENSCJAG00000014917	SRRT	100	95.791	Callithrix_jacchus
ENSDORG00000005584	Srrt	100	96.018	ENSCAFG00000023538	SRRT	100	96.018	Canis_familiaris
ENSDORG00000005584	Srrt	98	95.343	ENSCAFG00020013358	SRRT	98	94.179	Canis_lupus_dingo
ENSDORG00000005584	Srrt	100	95.336	ENSCHIG00000010495	SRRT	100	95.336	Capra_hircus
ENSDORG00000005584	Srrt	96	90.036	ENSTSYG00000036426	SRRT	99	90.107	Carlito_syrichta
ENSDORG00000005584	Srrt	95	95.301	ENSCAPG00000013586	SRRT	100	94.578	Cavia_aperea
ENSDORG00000005584	Srrt	100	95.677	ENSCPOG00000001739	SRRT	100	95.677	Cavia_porcellus
ENSDORG00000005584	Srrt	100	96.018	ENSCCAG00000015877	SRRT	100	96.018	Cebus_capucinus
ENSDORG00000005584	Srrt	100	96.018	ENSCATG00000036306	SRRT	100	96.018	Cercocebus_atys
ENSDORG00000005584	Srrt	100	95.904	ENSCLAG00000007568	SRRT	100	95.904	Chinchilla_lanigera
ENSDORG00000005584	Srrt	100	96.246	ENSCSAG00000017996	SRRT	100	96.246	Chlorocebus_sabaeus
ENSDORG00000005584	Srrt	56	93.529	ENSCHOG00000007815	SRRT	69	92.818	Choloepus_hoffmanni
ENSDORG00000005584	Srrt	74	82.443	ENSCPBG00000011553	SRRT	86	80.000	Chrysemys_picta_bellii
ENSDORG00000005584	Srrt	100	42.316	ENSCING00000003506	-	54	50.622	Ciona_intestinalis
ENSDORG00000005584	Srrt	99	45.769	ENSCSAVG00000008394	-	79	54.416	Ciona_savignyi
ENSDORG00000005584	Srrt	98	94.296	ENSCANG00000034556	SRRT	98	94.063	Colobus_angolensis_palliatus
ENSDORG00000005584	Srrt	98	94.767	ENSCGRG00001001594	Srrt	98	93.837	Cricetulus_griseus_chok1gshd
ENSDORG00000005584	Srrt	98	87.007	ENSCGRG00000007292	Srrt	98	86.195	Cricetulus_griseus_crigri
ENSDORG00000005584	Srrt	89	67.171	ENSCSEG00000017878	srrt	96	58.696	Cynoglossus_semilaevis
ENSDORG00000005584	Srrt	92	59.298	ENSCSEG00000005233	-	54	62.845	Cynoglossus_semilaevis
ENSDORG00000005584	Srrt	90	55.133	ENSCVAG00000017344	-	95	56.373	Cyprinodon_variegatus
ENSDORG00000005584	Srrt	99	65.720	ENSCVAG00000019848	srrt	54	75.271	Cyprinodon_variegatus
ENSDORG00000005584	Srrt	89	73.491	ENSDARG00000017762	srrt	96	66.590	Danio_rerio
ENSDORG00000005584	Srrt	98	94.529	ENSDNOG00000003851	SRRT	98	94.296	Dasypus_novemcinctus
ENSDORG00000005584	Srrt	97	48.155	FBgn0033062	Ars2	67	53.548	Drosophila_melanogaster
ENSDORG00000005584	Srrt	100	89.792	ENSETEG00000016175	SRRT	82	93.506	Echinops_telfairi
ENSDORG00000005584	Srrt	89	59.785	ENSEBUG00000008517	-	76	65.278	Eptatretus_burgeri
ENSDORG00000005584	Srrt	100	96.132	ENSEASG00005016956	SRRT	100	96.132	Equus_asinus_asinus
ENSDORG00000005584	Srrt	100	96.246	ENSECAG00000012292	SRRT	100	96.246	Equus_caballus
ENSDORG00000005584	Srrt	84	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSDORG00000005584	Srrt	89	71.398	ENSELUG00000006651	srrt	96	64.068	Esox_lucius
ENSDORG00000005584	Srrt	89	60.625	ENSELUG00000021216	-	53	65.401	Esox_lucius
ENSDORG00000005584	Srrt	100	96.246	ENSFCAG00000006855	SRRT	100	96.246	Felis_catus
ENSDORG00000005584	Srrt	57	51.613	ENSFALG00000007524	-	85	61.458	Ficedula_albicollis
ENSDORG00000005584	Srrt	98	90.962	ENSFDAG00000021347	SRRT	98	90.845	Fukomys_damarensis
ENSDORG00000005584	Srrt	80	74.879	ENSFHEG00000002756	srrt	89	75.362	Fundulus_heteroclitus
ENSDORG00000005584	Srrt	92	56.495	ENSFHEG00000004105	-	93	57.234	Fundulus_heteroclitus
ENSDORG00000005584	Srrt	86	59.956	ENSGMOG00000018694	-	53	60.352	Gadus_morhua
ENSDORG00000005584	Srrt	95	61.782	ENSGMOG00000018619	srrt	51	70.716	Gadus_morhua
ENSDORG00000005584	Srrt	89	57.143	ENSGAFG00000020383	-	96	53.910	Gambusia_affinis
ENSDORG00000005584	Srrt	89	71.922	ENSGAFG00000005423	srrt	51	75.054	Gambusia_affinis
ENSDORG00000005584	Srrt	97	68.317	ENSGACG00000020387	srrt	96	63.426	Gasterosteus_aculeatus
ENSDORG00000005584	Srrt	93	55.601	ENSGACG00000001100	-	53	61.653	Gasterosteus_aculeatus
ENSDORG00000005584	Srrt	100	96.246	ENSGGOG00000001508	SRRT	99	96.246	Gorilla_gorilla
ENSDORG00000005584	Srrt	89	71.490	ENSHBUG00000002942	srrt	50	74.837	Haplochromis_burtoni
ENSDORG00000005584	Srrt	100	95.006	ENSHGLG00000008344	Srrt	100	94.701	Heterocephalus_glaber_female
ENSDORG00000005584	Srrt	100	93.992	ENSHGLG00100018857	Srrt	98	93.364	Heterocephalus_glaber_male
ENSDORG00000005584	Srrt	98	62.763	ENSHCOG00000005403	srrt	96	62.768	Hippocampus_comes
ENSDORG00000005584	Srrt	92	57.322	ENSHCOG00000008904	-	95	52.788	Hippocampus_comes
ENSDORG00000005584	Srrt	89	73.060	ENSIPUG00000021150	srrt	51	73.060	Ictalurus_punctatus
ENSDORG00000005584	Srrt	98	94.179	ENSSTOG00000013776	SRRT	98	93.946	Ictidomys_tridecemlineatus
ENSDORG00000005584	Srrt	98	95.770	ENSJJAG00000010446	Srrt	100	93.592	Jaculus_jaculus
ENSDORG00000005584	Srrt	95	67.821	ENSKMAG00000013599	srrt	54	74.837	Kryptolebias_marmoratus
ENSDORG00000005584	Srrt	94	58.103	ENSKMAG00000008468	-	96	55.916	Kryptolebias_marmoratus
ENSDORG00000005584	Srrt	89	71.767	ENSLBEG00000016308	srrt	54	75.322	Labrus_bergylta
ENSDORG00000005584	Srrt	95	63.615	ENSLACG00000001089	SRRT	96	64.802	Latimeria_chalumnae
ENSDORG00000005584	Srrt	100	96.241	ENSLAFG00000007725	SRRT	100	96.241	Loxodonta_africana
ENSDORG00000005584	Srrt	98	94.412	ENSMFAG00000033745	SRRT	99	95.154	Macaca_fascicularis
ENSDORG00000005584	Srrt	100	96.246	ENSMMUG00000021255	SRRT	100	96.246	Macaca_mulatta
ENSDORG00000005584	Srrt	100	96.246	ENSMNEG00000041864	SRRT	100	96.246	Macaca_nemestrina
ENSDORG00000005584	Srrt	98	94.412	ENSMLEG00000029479	SRRT	98	94.179	Mandrillus_leucophaeus
ENSDORG00000005584	Srrt	94	59.146	ENSMAMG00000010681	-	96	57.293	Mastacembelus_armatus
ENSDORG00000005584	Srrt	89	70.346	ENSMAMG00000014311	srrt	96	64.219	Mastacembelus_armatus
ENSDORG00000005584	Srrt	94	58.333	ENSMZEG00005028002	-	96	55.683	Maylandia_zebra
ENSDORG00000005584	Srrt	89	71.274	ENSMZEG00005016135	srrt	50	74.620	Maylandia_zebra
ENSDORG00000005584	Srrt	98	94.988	ENSMAUG00000011386	Srrt	100	93.642	Mesocricetus_auratus
ENSDORG00000005584	Srrt	98	94.761	ENSMICG00000009471	SRRT	99	93.932	Microcebus_murinus
ENSDORG00000005584	Srrt	98	94.755	ENSMOCG00000001971	Srrt	100	93.834	Microtus_ochrogaster
ENSDORG00000005584	Srrt	89	62.527	ENSMMOG00000011137	-	55	65.161	Mola_mola
ENSDORG00000005584	Srrt	100	67.179	ENSMMOG00000016399	srrt	54	75.054	Mola_mola
ENSDORG00000005584	Srrt	90	84.134	ENSMODG00000004862	SRRT	90	90.966	Monodelphis_domestica
ENSDORG00000005584	Srrt	100	48.664	ENSMALG00000005567	-	84	52.826	Monopterus_albus
ENSDORG00000005584	Srrt	89	67.100	ENSMALG00000018604	srrt	80	71.584	Monopterus_albus
ENSDORG00000005584	Srrt	100	96.211	MGP_CAROLIEiJ_G0027870	Srrt	100	99.254	Mus_caroli
ENSDORG00000005584	Srrt	100	96.211	ENSMUSG00000037364	Srrt	99	99.254	Mus_musculus
ENSDORG00000005584	Srrt	98	95.770	MGP_PahariEiJ_G0024456	Srrt	100	98.881	Mus_pahari
ENSDORG00000005584	Srrt	100	96.211	MGP_SPRETEiJ_G0028875	Srrt	100	99.254	Mus_spretus
ENSDORG00000005584	Srrt	100	96.246	ENSMPUG00000015839	SRRT	100	96.246	Mustela_putorius_furo
ENSDORG00000005584	Srrt	100	96.359	ENSMLUG00000009975	SRRT	100	96.359	Myotis_lucifugus
ENSDORG00000005584	Srrt	98	95.338	ENSNGAG00000023715	Srrt	100	93.836	Nannospalax_galili
ENSDORG00000005584	Srrt	89	70.563	ENSNBRG00000019100	srrt	52	73.319	Neolamprologus_brichardi
ENSDORG00000005584	Srrt	95	84.892	ENSNLEG00000011987	SRRT	99	83.273	Nomascus_leucogenys
ENSDORG00000005584	Srrt	99	72.169	ENSMEUG00000011941	SRRT	98	73.064	Notamacropus_eugenii
ENSDORG00000005584	Srrt	80	87.500	ENSOPRG00000002502	-	67	99.237	Ochotona_princeps
ENSDORG00000005584	Srrt	100	96.096	ENSODEG00000016856	SRRT	100	96.096	Octodon_degus
ENSDORG00000005584	Srrt	94	59.192	ENSONIG00000016080	-	94	54.098	Oreochromis_niloticus
ENSDORG00000005584	Srrt	89	71.706	ENSONIG00000004242	srrt	52	74.145	Oreochromis_niloticus
ENSDORG00000005584	Srrt	95	68.763	ENSORLG00000008120	srrt	52	74.403	Oryzias_latipes
ENSDORG00000005584	Srrt	95	68.571	ENSORLG00020003058	srrt	96	64.005	Oryzias_latipes_hni
ENSDORG00000005584	Srrt	95	68.560	ENSORLG00015008062	srrt	96	63.889	Oryzias_latipes_hsok
ENSDORG00000005584	Srrt	89	61.194	ENSOMEG00000006963	-	96	56.009	Oryzias_melastigma
ENSDORG00000005584	Srrt	96	65.513	ENSOMEG00000003155	srrt	96	64.019	Oryzias_melastigma
ENSDORG00000005584	Srrt	100	96.246	ENSOGAG00000017242	SRRT	100	96.246	Otolemur_garnettii
ENSDORG00000005584	Srrt	98	93.481	ENSOARG00000015645	SRRT	98	93.364	Ovis_aries
ENSDORG00000005584	Srrt	98	94.296	ENSPPAG00000041090	SRRT	98	94.063	Pan_paniscus
ENSDORG00000005584	Srrt	98	95.111	ENSPPRG00000009557	SRRT	98	94.063	Panthera_pardus
ENSDORG00000005584	Srrt	100	96.132	ENSPTIG00000014355	SRRT	100	96.132	Panthera_tigris_altaica
ENSDORG00000005584	Srrt	98	94.296	ENSPTRG00000019511	SRRT	98	94.063	Pan_troglodytes
ENSDORG00000005584	Srrt	100	91.871	ENSPANG00000020763	SRRT	98	93.743	Papio_anubis
ENSDORG00000005584	Srrt	94	67.189	ENSPKIG00000022212	-	96	66.864	Paramormyrops_kingsleyae
ENSDORG00000005584	Srrt	96	72.032	ENSPKIG00000005434	srrt	54	78.205	Paramormyrops_kingsleyae
ENSDORG00000005584	Srrt	100	79.119	ENSPSIG00000016311	SRRT	96	80.166	Pelodiscus_sinensis
ENSDORG00000005584	Srrt	89	71.706	ENSPMGG00000002841	srrt	56	71.706	Periophthalmus_magnuspinnatus
ENSDORG00000005584	Srrt	98	94.712	ENSPEMG00000010834	Srrt	100	93.592	Peromyscus_maniculatus_bairdii
ENSDORG00000005584	Srrt	99	58.812	ENSPMAG00000009614	-	55	64.421	Petromyzon_marinus
ENSDORG00000005584	Srrt	98	89.364	ENSPCIG00000000816	SRRT	98	89.942	Phascolarctos_cinereus
ENSDORG00000005584	Srrt	89	57.569	ENSPFOG00000016554	-	54	61.325	Poecilia_formosa
ENSDORG00000005584	Srrt	89	71.983	ENSPFOG00000005704	srrt	96	64.849	Poecilia_formosa
ENSDORG00000005584	Srrt	89	71.490	ENSPLAG00000021992	srrt	51	74.620	Poecilia_latipinna
ENSDORG00000005584	Srrt	93	53.309	ENSPLAG00000004526	-	55	60.981	Poecilia_latipinna
ENSDORG00000005584	Srrt	89	71.552	ENSPMEG00000001182	srrt	96	65.076	Poecilia_mexicana
ENSDORG00000005584	Srrt	90	52.592	ENSPMEG00000001520	-	53	60.271	Poecilia_mexicana
ENSDORG00000005584	Srrt	99	65.789	ENSPREG00000022308	srrt	96	64.774	Poecilia_reticulata
ENSDORG00000005584	Srrt	98	84.633	ENSPPYG00000017432	SRRT	98	84.168	Pongo_abelii
ENSDORG00000005584	Srrt	98	90.773	ENSPCAG00000001621	SRRT	98	90.427	Procavia_capensis
ENSDORG00000005584	Srrt	100	96.132	ENSPCOG00000025751	SRRT	100	96.132	Propithecus_coquereli
ENSDORG00000005584	Srrt	100	88.054	ENSPVAG00000000834	SRRT	100	88.433	Pteropus_vampyrus
ENSDORG00000005584	Srrt	89	71.274	ENSPNYG00000018710	srrt	52	74.620	Pundamilia_nyererei
ENSDORG00000005584	Srrt	82	71.605	ENSPNAG00000010629	srrt	95	54.813	Pygocentrus_nattereri
ENSDORG00000005584	Srrt	91	85.532	ENSRNOG00000048277	AABR07035787.1	93	85.684	Rattus_norvegicus
ENSDORG00000005584	Srrt	100	96.246	ENSRBIG00000035718	SRRT	100	96.246	Rhinopithecus_bieti
ENSDORG00000005584	Srrt	100	96.246	ENSRROG00000030622	SRRT	100	96.246	Rhinopithecus_roxellana
ENSDORG00000005584	Srrt	100	96.018	ENSSBOG00000033570	SRRT	100	96.018	Saimiri_boliviensis_boliviensis
ENSDORG00000005584	Srrt	93	86.708	ENSSHAG00000007349	-	100	85.446	Sarcophilus_harrisii
ENSDORG00000005584	Srrt	90	75.536	ENSSFOG00015017293	srrt	96	68.729	Scleropages_formosus
ENSDORG00000005584	Srrt	89	57.928	ENSSMAG00000018195	-	98	53.937	Scophthalmus_maximus
ENSDORG00000005584	Srrt	95	65.060	ENSSMAG00000015342	srrt	96	64.761	Scophthalmus_maximus
ENSDORG00000005584	Srrt	89	71.490	ENSSDUG00000012049	srrt	96	64.935	Seriola_dumerili
ENSDORG00000005584	Srrt	92	55.094	ENSSDUG00000002051	-	93	55.224	Seriola_dumerili
ENSDORG00000005584	Srrt	89	71.274	ENSSLDG00000017477	srrt	81	75.271	Seriola_lalandi_dorsalis
ENSDORG00000005584	Srrt	89	71.674	ENSSPAG00000005665	srrt	94	64.195	Stegastes_partitus
ENSDORG00000005584	Srrt	89	55.172	ENSSPAG00000018943	-	95	55.653	Stegastes_partitus
ENSDORG00000005584	Srrt	95	91.966	ENSSSCG00000024789	SRRT	99	91.636	Sus_scrofa
ENSDORG00000005584	Srrt	96	63.551	ENSTRUG00000016075	srrt	96	64.767	Takifugu_rubripes
ENSDORG00000005584	Srrt	88	56.522	ENSTRUG00000000023	-	94	54.733	Takifugu_rubripes
ENSDORG00000005584	Srrt	89	70.213	ENSTNIG00000011779	srrt	100	61.573	Tetraodon_nigroviridis
ENSDORG00000005584	Srrt	97	54.492	ENSTNIG00000003111	-	96	52.846	Tetraodon_nigroviridis
ENSDORG00000005584	Srrt	61	60.502	ENSTNIG00000019765	-	95	63.407	Tetraodon_nigroviridis
ENSDORG00000005584	Srrt	82	90.836	ENSTBEG00000005212	SRRT	62	94.865	Tupaia_belangeri
ENSDORG00000005584	Srrt	100	95.677	ENSTTRG00000011104	SRRT	100	95.677	Tursiops_truncatus
ENSDORG00000005584	Srrt	95	96.305	ENSUAMG00000027997	SRRT	98	96.305	Ursus_americanus
ENSDORG00000005584	Srrt	100	96.473	ENSUMAG00000011295	SRRT	100	96.473	Ursus_maritimus
ENSDORG00000005584	Srrt	100	96.018	ENSVVUG00000023572	SRRT	100	96.018	Vulpes_vulpes
ENSDORG00000005584	Srrt	89	72.591	ENSXETG00000025124	srrt	84	75.966	Xenopus_tropicalis
ENSDORG00000005584	Srrt	89	50.756	ENSXCOG00000013105	-	90	51.509	Xiphophorus_couchianus
ENSDORG00000005584	Srrt	89	72.354	ENSXMAG00000007627	srrt	56	75.108	Xiphophorus_maculatus
ENSDORG00000005584	Srrt	89	57.602	ENSXMAG00000002090	-	96	54.384	Xiphophorus_maculatus