EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005613 (Gene tree)
Gene ID: 105984303
Gene Symbol: Sf3a1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 23259 bases
Position: chrKN672369.1:2905395-2928653
Accession: 105984303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005252	PRP21_like_P	PF12230.8	8.2e-52	1	1
ENSDORP00000005252	Surp	PF01805.20	5.6e-46	1	2
ENSDORP00000005252	Surp	PF01805.20	5.6e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005614	-	2777	XM_013014437	ENSDORP00000005252	793 (aa)	XP_012869891	A0A1S3EZS3

Gene Model

Click here to download ENSDORG00000005613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005613	Sf3a1	100	98.991	ENSG00000099995	SF3A1	100	98.991	Homo_sapiens
ENSDORG00000005613	Sf3a1	100	83.522	ENSAPOG00000020465	sf3a1	99	84.910	Acanthochromis_polyacanthus
ENSDORG00000005613	Sf3a1	100	98.742	ENSAMEG00000007737	SF3A1	100	98.742	Ailuropoda_melanoleuca
ENSDORG00000005613	Sf3a1	100	84.403	ENSACIG00000020672	sf3a1	99	85.038	Amphilophus_citrinellus
ENSDORG00000005613	Sf3a1	100	83.250	ENSAOCG00000003060	sf3a1	99	84.910	Amphiprion_ocellaris
ENSDORG00000005613	Sf3a1	100	83.375	ENSAPEG00000010735	sf3a1	99	85.038	Amphiprion_percula
ENSDORG00000005613	Sf3a1	96	85.938	ENSATEG00000021201	sf3a1	98	85.219	Anabas_testudineus
ENSDORG00000005613	Sf3a1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.677	Anas_platyrhynchos
ENSDORG00000005613	Sf3a1	100	85.591	ENSACAG00000009415	SF3A1	100	87.315	Anolis_carolinensis
ENSDORG00000005613	Sf3a1	100	99.243	ENSANAG00000032045	SF3A1	100	99.243	Aotus_nancymaae
ENSDORG00000005613	Sf3a1	100	84.355	ENSACLG00000012622	sf3a1	99	85.787	Astatotilapia_calliptera
ENSDORG00000005613	Sf3a1	99	83.186	ENSAMXG00000005382	sf3a1	99	84.556	Astyanax_mexicanus
ENSDORG00000005613	Sf3a1	100	99.243	ENSBTAG00000003390	SF3A1	100	99.243	Bos_taurus
ENSDORG00000005613	Sf3a1	84	43.268	WBGene00004188	prp-21	94	43.502	Caenorhabditis_elegans
ENSDORG00000005613	Sf3a1	100	99.117	ENSCJAG00000010370	SF3A1	100	99.117	Callithrix_jacchus
ENSDORG00000005613	Sf3a1	100	99.243	ENSCAFG00000012559	SF3A1	100	99.243	Canis_familiaris
ENSDORG00000005613	Sf3a1	100	99.243	ENSCAFG00020000838	SF3A1	100	99.243	Canis_lupus_dingo
ENSDORG00000005613	Sf3a1	100	99.117	ENSCHIG00000018642	SF3A1	100	99.117	Capra_hircus
ENSDORG00000005613	Sf3a1	100	99.496	ENSTSYG00000004739	SF3A1	100	99.496	Carlito_syrichta
ENSDORG00000005613	Sf3a1	94	81.575	ENSCAPG00000015414	SF3A1	98	81.575	Cavia_aperea
ENSDORG00000005613	Sf3a1	100	98.991	ENSCPOG00000014589	SF3A1	100	98.991	Cavia_porcellus
ENSDORG00000005613	Sf3a1	100	99.243	ENSCCAG00000032006	SF3A1	100	99.243	Cebus_capucinus
ENSDORG00000005613	Sf3a1	100	99.117	ENSCATG00000029241	SF3A1	100	99.117	Cercocebus_atys
ENSDORG00000005613	Sf3a1	100	98.739	ENSCLAG00000006508	SF3A1	100	98.739	Chinchilla_lanigera
ENSDORG00000005613	Sf3a1	100	98.991	ENSCSAG00000009470	SF3A1	100	98.991	Chlorocebus_sabaeus
ENSDORG00000005613	Sf3a1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSDORG00000005613	Sf3a1	100	90.932	ENSCPBG00000007595	SF3A1	100	91.436	Chrysemys_picta_bellii
ENSDORG00000005613	Sf3a1	94	52.249	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSDORG00000005613	Sf3a1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSDORG00000005613	Sf3a1	100	98.991	ENSCANG00000033564	SF3A1	100	98.991	Colobus_angolensis_palliatus
ENSDORG00000005613	Sf3a1	100	98.487	ENSCGRG00001008933	Sf3a1	100	98.487	Cricetulus_griseus_chok1gshd
ENSDORG00000005613	Sf3a1	100	98.487	ENSCGRG00000006127	Sf3a1	100	98.487	Cricetulus_griseus_crigri
ENSDORG00000005613	Sf3a1	100	81.533	ENSCSEG00000010792	sf3a1	99	82.308	Cynoglossus_semilaevis
ENSDORG00000005613	Sf3a1	100	83.019	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSDORG00000005613	Sf3a1	100	82.286	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSDORG00000005613	Sf3a1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSDORG00000005613	Sf3a1	83	60.354	FBgn0266917	Sf3a1	85	59.459	Drosophila_melanogaster
ENSDORG00000005613	Sf3a1	89	96.011	ENSETEG00000017194	SF3A1	100	96.011	Echinops_telfairi
ENSDORG00000005613	Sf3a1	98	66.102	ENSEBUG00000001285	sf3a1	96	67.531	Eptatretus_burgeri
ENSDORG00000005613	Sf3a1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSDORG00000005613	Sf3a1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSDORG00000005613	Sf3a1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSDORG00000005613	Sf3a1	100	82.456	ENSELUG00000022578	sf3a1	98	83.077	Esox_lucius
ENSDORG00000005613	Sf3a1	100	99.243	ENSFCAG00000011932	SF3A1	100	99.243	Felis_catus
ENSDORG00000005613	Sf3a1	95	93.254	ENSFALG00000006944	SF3A1	100	92.191	Ficedula_albicollis
ENSDORG00000005613	Sf3a1	100	98.991	ENSFDAG00000009560	SF3A1	100	98.991	Fukomys_damarensis
ENSDORG00000005613	Sf3a1	100	84.025	ENSFHEG00000010866	sf3a1	98	85.286	Fundulus_heteroclitus
ENSDORG00000005613	Sf3a1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.612	Gadus_morhua
ENSDORG00000005613	Sf3a1	95	94.180	ENSGALG00000007937	SF3A1	100	92.695	Gallus_gallus
ENSDORG00000005613	Sf3a1	100	83.145	ENSGAFG00000009111	sf3a1	97	84.837	Gambusia_affinis
ENSDORG00000005613	Sf3a1	100	82.242	ENSGACG00000011893	sf3a1	97	83.901	Gasterosteus_aculeatus
ENSDORG00000005613	Sf3a1	96	91.196	ENSGAGG00000000762	SF3A1	99	91.721	Gopherus_agassizii
ENSDORG00000005613	Sf3a1	100	98.991	ENSGGOG00000012631	SF3A1	100	98.991	Gorilla_gorilla
ENSDORG00000005613	Sf3a1	100	84.355	ENSHBUG00000015795	sf3a1	99	85.787	Haplochromis_burtoni
ENSDORG00000005613	Sf3a1	100	99.243	ENSHGLG00000007907	SF3A1	100	99.243	Heterocephalus_glaber_female
ENSDORG00000005613	Sf3a1	100	99.243	ENSHGLG00100013799	SF3A1	100	99.243	Heterocephalus_glaber_male
ENSDORG00000005613	Sf3a1	100	80.377	ENSHCOG00000015423	sf3a1	99	81.419	Hippocampus_comes
ENSDORG00000005613	Sf3a1	96	82.422	ENSIPUG00000002470	sf3a1	98	83.203	Ictalurus_punctatus
ENSDORG00000005613	Sf3a1	100	99.496	ENSSTOG00000013892	SF3A1	100	99.496	Ictidomys_tridecemlineatus
ENSDORG00000005613	Sf3a1	100	99.244	ENSJJAG00000022566	Sf3a1	100	99.244	Jaculus_jaculus
ENSDORG00000005613	Sf3a1	100	82.642	ENSKMAG00000002400	sf3a1	98	84.635	Kryptolebias_marmoratus
ENSDORG00000005613	Sf3a1	100	82.642	ENSLBEG00000022974	sf3a1	99	83.871	Labrus_bergylta
ENSDORG00000005613	Sf3a1	100	87.077	ENSLACG00000003565	SF3A1	97	88.672	Latimeria_chalumnae
ENSDORG00000005613	Sf3a1	100	85.088	ENSLOCG00000008251	sf3a1	97	87.273	Lepisosteus_oculatus
ENSDORG00000005613	Sf3a1	98	62.293	ENSLAFG00000026032	-	98	62.420	Loxodonta_africana
ENSDORG00000005613	Sf3a1	100	98.991	ENSLAFG00000000448	SF3A1	100	98.991	Loxodonta_africana
ENSDORG00000005613	Sf3a1	100	98.865	ENSMFAG00000031979	SF3A1	100	98.865	Macaca_fascicularis
ENSDORG00000005613	Sf3a1	100	98.865	ENSMMUG00000005547	SF3A1	100	98.865	Macaca_mulatta
ENSDORG00000005613	Sf3a1	100	98.739	ENSMNEG00000037229	SF3A1	100	98.739	Macaca_nemestrina
ENSDORG00000005613	Sf3a1	100	98.991	ENSMLEG00000041908	SF3A1	100	98.991	Mandrillus_leucophaeus
ENSDORG00000005613	Sf3a1	97	85.770	ENSMAMG00000006460	sf3a1	97	85.899	Mastacembelus_armatus
ENSDORG00000005613	Sf3a1	100	84.355	ENSMZEG00005009633	sf3a1	99	85.787	Maylandia_zebra
ENSDORG00000005613	Sf3a1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.669	Meleagris_gallopavo
ENSDORG00000005613	Sf3a1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSDORG00000005613	Sf3a1	100	98.991	ENSMICG00000010038	SF3A1	100	98.991	Microcebus_murinus
ENSDORG00000005613	Sf3a1	100	98.613	ENSMOCG00000008438	Sf3a1	100	98.613	Microtus_ochrogaster
ENSDORG00000005613	Sf3a1	100	81.509	ENSMMOG00000015588	sf3a1	98	82.883	Mola_mola
ENSDORG00000005613	Sf3a1	100	97.982	ENSMODG00000009270	SF3A1	100	97.982	Monodelphis_domestica
ENSDORG00000005613	Sf3a1	100	84.383	ENSMALG00000000148	sf3a1	99	85.967	Monopterus_albus
ENSDORG00000005613	Sf3a1	100	98.108	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.108	Mus_caroli
ENSDORG00000005613	Sf3a1	100	98.108	ENSMUSG00000002129	Sf3a1	100	98.108	Mus_musculus
ENSDORG00000005613	Sf3a1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSDORG00000005613	Sf3a1	100	98.108	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.108	Mus_spretus
ENSDORG00000005613	Sf3a1	100	99.243	ENSMPUG00000013144	SF3A1	100	99.243	Mustela_putorius_furo
ENSDORG00000005613	Sf3a1	100	99.369	ENSMLUG00000002139	SF3A1	100	99.369	Myotis_lucifugus
ENSDORG00000005613	Sf3a1	100	99.117	ENSNGAG00000016977	Sf3a1	100	99.117	Nannospalax_galili
ENSDORG00000005613	Sf3a1	100	83.770	ENSNBRG00000016642	sf3a1	96	87.220	Neolamprologus_brichardi
ENSDORG00000005613	Sf3a1	100	98.991	ENSNLEG00000003686	SF3A1	100	98.991	Nomascus_leucogenys
ENSDORG00000005613	Sf3a1	96	88.289	ENSMEUG00000008741	SF3A1	100	88.289	Notamacropus_eugenii
ENSDORG00000005613	Sf3a1	100	98.613	ENSOPRG00000016636	SF3A1	100	98.613	Ochotona_princeps
ENSDORG00000005613	Sf3a1	100	98.739	ENSODEG00000002571	SF3A1	100	98.739	Octodon_degus
ENSDORG00000005613	Sf3a1	100	84.250	ENSONIG00000010848	sf3a1	99	85.166	Oreochromis_niloticus
ENSDORG00000005613	Sf3a1	100	98.991	ENSOCUG00000007633	SF3A1	100	98.991	Oryctolagus_cuniculus
ENSDORG00000005613	Sf3a1	96	81.759	ENSORLG00000013050	sf3a1	99	83.712	Oryzias_latipes
ENSDORG00000005613	Sf3a1	99	80.253	ENSORLG00020003236	sf3a1	94	83.845	Oryzias_latipes_hni
ENSDORG00000005613	Sf3a1	100	82.390	ENSORLG00015017411	sf3a1	99	84.387	Oryzias_latipes_hsok
ENSDORG00000005613	Sf3a1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.871	Oryzias_melastigma
ENSDORG00000005613	Sf3a1	100	98.991	ENSOGAG00000012931	SF3A1	100	98.991	Otolemur_garnettii
ENSDORG00000005613	Sf3a1	100	97.352	ENSOARG00000006849	SF3A1	100	97.352	Ovis_aries
ENSDORG00000005613	Sf3a1	100	97.982	ENSPPAG00000041790	SF3A1	100	97.982	Pan_paniscus
ENSDORG00000005613	Sf3a1	100	99.243	ENSPPRG00000004391	SF3A1	100	99.243	Panthera_pardus
ENSDORG00000005613	Sf3a1	97	99.223	ENSPTIG00000000844	SF3A1	100	99.223	Panthera_tigris_altaica
ENSDORG00000005613	Sf3a1	100	98.991	ENSPTRG00000014240	SF3A1	100	98.991	Pan_troglodytes
ENSDORG00000005613	Sf3a1	100	98.991	ENSPANG00000020772	SF3A1	100	98.991	Papio_anubis
ENSDORG00000005613	Sf3a1	83	93.407	ENSPSIG00000012803	SF3A1	96	94.727	Pelodiscus_sinensis
ENSDORG00000005613	Sf3a1	96	84.162	ENSPMGG00000023096	sf3a1	100	84.555	Periophthalmus_magnuspinnatus
ENSDORG00000005613	Sf3a1	100	98.739	ENSPEMG00000009494	Sf3a1	100	98.739	Peromyscus_maniculatus_bairdii
ENSDORG00000005613	Sf3a1	69	77.858	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSDORG00000005613	Sf3a1	100	97.856	ENSPCIG00000022692	SF3A1	100	97.856	Phascolarctos_cinereus
ENSDORG00000005613	Sf3a1	100	75.251	ENSPFOG00000016768	sf3a1	93	78.912	Poecilia_formosa
ENSDORG00000005613	Sf3a1	100	83.543	ENSPLAG00000017268	sf3a1	97	85.098	Poecilia_latipinna
ENSDORG00000005613	Sf3a1	84	85.994	ENSPMEG00000019811	sf3a1	98	85.241	Poecilia_mexicana
ENSDORG00000005613	Sf3a1	100	83.668	ENSPREG00000010347	sf3a1	97	85.490	Poecilia_reticulata
ENSDORG00000005613	Sf3a1	100	98.991	ENSPPYG00000011707	SF3A1	100	98.991	Pongo_abelii
ENSDORG00000005613	Sf3a1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSDORG00000005613	Sf3a1	100	98.991	ENSPCOG00000026630	SF3A1	100	98.991	Propithecus_coquereli
ENSDORG00000005613	Sf3a1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.121	Pteropus_vampyrus
ENSDORG00000005613	Sf3a1	100	84.355	ENSPNYG00000018706	sf3a1	99	85.787	Pundamilia_nyererei
ENSDORG00000005613	Sf3a1	97	83.697	ENSPNAG00000003721	sf3a1	99	84.981	Pygocentrus_nattereri
ENSDORG00000005613	Sf3a1	100	98.361	ENSRNOG00000005218	Sf3a1	100	98.361	Rattus_norvegicus
ENSDORG00000005613	Sf3a1	100	98.991	ENSRBIG00000032167	SF3A1	100	98.991	Rhinopithecus_bieti
ENSDORG00000005613	Sf3a1	100	98.991	ENSRROG00000044908	SF3A1	100	98.991	Rhinopithecus_roxellana
ENSDORG00000005613	Sf3a1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSDORG00000005613	Sf3a1	99	93.544	ENSSHAG00000003666	SF3A1	98	95.213	Sarcophilus_harrisii
ENSDORG00000005613	Sf3a1	100	83.625	ENSSFOG00015004579	sf3a1	99	85.769	Scleropages_formosus
ENSDORG00000005613	Sf3a1	100	81.635	ENSSMAG00000004275	sf3a1	97	83.268	Scophthalmus_maximus
ENSDORG00000005613	Sf3a1	100	83.774	ENSSDUG00000022219	sf3a1	99	84.910	Seriola_dumerili
ENSDORG00000005613	Sf3a1	100	83.774	ENSSLDG00000012642	sf3a1	99	84.910	Seriola_lalandi_dorsalis
ENSDORG00000005613	Sf3a1	97	95.725	ENSSARG00000005960	SF3A1	100	95.725	Sorex_araneus
ENSDORG00000005613	Sf3a1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.915	Sphenodon_punctatus
ENSDORG00000005613	Sf3a1	100	84.528	ENSSPAG00000011856	sf3a1	99	85.294	Stegastes_partitus
ENSDORG00000005613	Sf3a1	100	99.117	ENSSSCG00000010002	SF3A1	100	99.117	Sus_scrofa
ENSDORG00000005613	Sf3a1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.904	Taeniopygia_guttata
ENSDORG00000005613	Sf3a1	100	81.258	ENSTRUG00000006118	sf3a1	97	82.745	Takifugu_rubripes
ENSDORG00000005613	Sf3a1	64	81.413	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSDORG00000005613	Sf3a1	100	91.677	ENSTBEG00000012771	SF3A1	100	91.677	Tupaia_belangeri
ENSDORG00000005613	Sf3a1	100	99.118	ENSTTRG00000001535	SF3A1	100	99.118	Tursiops_truncatus
ENSDORG00000005613	Sf3a1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSDORG00000005613	Sf3a1	99	98.214	ENSUMAG00000016665	SF3A1	99	98.214	Ursus_maritimus
ENSDORG00000005613	Sf3a1	100	99.243	ENSVVUG00000003075	SF3A1	100	99.243	Vulpes_vulpes
ENSDORG00000005613	Sf3a1	100	85.947	ENSXETG00000016144	sf3a1	100	85.822	Xenopus_tropicalis
ENSDORG00000005613	Sf3a1	100	82.893	ENSXCOG00000015653	sf3a1	97	84.575	Xiphophorus_couchianus
ENSDORG00000005613	Sf3a1	100	83.019	ENSXMAG00000002753	sf3a1	97	84.706	Xiphophorus_maculatus