EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000005861 (Gene tree)
Gene ID: 105988181
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|HELIC2|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 38436 bases
Position: chrKN672393.1:2930730-2969165
Accession: 105988181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005492	ResIII	PF04851.15	1.4e-25	1	2
ENSDORP00000005492	ResIII	PF04851.15	1.4e-25	2	2
ENSDORP00000005492	DEAD	PF00270.29	1.9e-52	1	2
ENSDORP00000005492	DEAD	PF00270.29	1.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005867	-	6333	XM_013019724	ENSDORP00000005492	2110 (aa)	XP_012875178	UPI000BAD0B56

Gene Model

Click here to download ENSDORG00000005861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000005861	Snrnp200	76	31.807	ENSDORG00000014661	Hfm1	58	31.807
ENSDORG00000005861	Snrnp200	82	44.045	ENSDORG00000008572	Ascc3	81	44.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005861	Snrnp200	100	97.148	ENSG00000144028	SNRNP200	99	99.489	Homo_sapiens
ENSDORG00000005861	Snrnp200	99	88.420	ENSAPOG00000010223	snrnp200	99	88.318	Acanthochromis_polyacanthus
ENSDORG00000005861	Snrnp200	100	97.101	ENSAMEG00000008996	SNRNP200	100	97.101	Ailuropoda_melanoleuca
ENSDORG00000005861	Snrnp200	97	87.553	ENSACIG00000001764	snrnp200	98	87.553	Amphilophus_citrinellus
ENSDORG00000005861	Snrnp200	99	88.420	ENSAOCG00000024593	snrnp200	100	87.340	Amphiprion_ocellaris
ENSDORG00000005861	Snrnp200	97	87.286	ENSAPEG00000012554	snrnp200	100	87.286	Amphiprion_percula
ENSDORG00000005861	Snrnp200	99	88.186	ENSATEG00000022522	snrnp200	99	88.084	Anabas_testudineus
ENSDORG00000005861	Snrnp200	99	94.915	ENSAPLG00000004313	SNRNP200	100	94.915	Anas_platyrhynchos
ENSDORG00000005861	Snrnp200	99	94.131	ENSACAG00000000434	SNRNP200	100	94.131	Anolis_carolinensis
ENSDORG00000005861	Snrnp200	100	97.775	ENSANAG00000036625	SNRNP200	100	97.775	Aotus_nancymaae
ENSDORG00000005861	Snrnp200	99	88.045	ENSACLG00000011188	snrnp200	99	87.944	Astatotilapia_calliptera
ENSDORG00000005861	Snrnp200	99	88.045	ENSAMXG00000005684	snrnp200	99	87.944	Astyanax_mexicanus
ENSDORG00000005861	Snrnp200	100	96.587	ENSBTAG00000000848	SNRNP200	100	96.587	Bos_taurus
ENSDORG00000005861	Snrnp200	100	97.101	ENSCJAG00000007514	SNRNP200	100	97.101	Callithrix_jacchus
ENSDORG00000005861	Snrnp200	100	96.319	ENSCAFG00020019979	SNRNP200	100	99.592	Canis_lupus_dingo
ENSDORG00000005861	Snrnp200	100	96.774	ENSCHIG00000020611	SNRNP200	100	96.774	Capra_hircus
ENSDORG00000005861	Snrnp200	100	97.148	ENSTSYG00000010467	SNRNP200	100	97.148	Carlito_syrichta
ENSDORG00000005861	Snrnp200	99	96.944	ENSCAPG00000017234	SNRNP200	99	96.944	Cavia_aperea
ENSDORG00000005861	Snrnp200	100	96.961	ENSCPOG00000006776	SNRNP200	100	96.961	Cavia_porcellus
ENSDORG00000005861	Snrnp200	100	97.101	ENSCCAG00000033962	SNRNP200	100	97.101	Cebus_capucinus
ENSDORG00000005861	Snrnp200	100	97.148	ENSCATG00000015790	SNRNP200	100	97.148	Cercocebus_atys
ENSDORG00000005861	Snrnp200	100	96.821	ENSCLAG00000004116	SNRNP200	100	96.821	Chinchilla_lanigera
ENSDORG00000005861	Snrnp200	100	97.101	ENSCSAG00000017369	SNRNP200	100	97.101	Chlorocebus_sabaeus
ENSDORG00000005861	Snrnp200	76	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSDORG00000005861	Snrnp200	100	95.312	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSDORG00000005861	Snrnp200	99	74.592	ENSCING00000005082	-	99	74.732	Ciona_intestinalis
ENSDORG00000005861	Snrnp200	100	93.567	ENSCANG00000033932	SNRNP200	97	99.538	Colobus_angolensis_palliatus
ENSDORG00000005861	Snrnp200	100	97.148	ENSCGRG00001022610	Snrnp200	100	97.148	Cricetulus_griseus_chok1gshd
ENSDORG00000005861	Snrnp200	100	96.592	ENSCGRG00000016472	Snrnp200	100	96.592	Cricetulus_griseus_crigri
ENSDORG00000005861	Snrnp200	100	87.477	ENSCSEG00000016399	snrnp200	100	87.477	Cynoglossus_semilaevis
ENSDORG00000005861	Snrnp200	100	83.131	ENSCVAG00000017631	snrnp200	99	83.131	Cyprinodon_variegatus
ENSDORG00000005861	Snrnp200	100	87.850	ENSDARG00000077536	snrnp200	99	87.850	Danio_rerio
ENSDORG00000005861	Snrnp200	100	95.605	ENSDNOG00000011227	SNRNP200	100	95.605	Dasypus_novemcinctus
ENSDORG00000005861	Snrnp200	100	72.710	FBgn0263599	l(3)72Ab	99	72.617	Drosophila_melanogaster
ENSDORG00000005861	Snrnp200	95	95.004	ENSETEG00000000162	SNRNP200	74	95.004	Echinops_telfairi
ENSDORG00000005861	Snrnp200	84	81.038	ENSEBUG00000016524	snrnp200	95	81.038	Eptatretus_burgeri
ENSDORG00000005861	Snrnp200	100	95.996	ENSEASG00005001884	SNRNP200	100	95.996	Equus_asinus_asinus
ENSDORG00000005861	Snrnp200	100	97.101	ENSECAG00000019675	SNRNP200	99	98.961	Equus_caballus
ENSDORG00000005861	Snrnp200	89	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSDORG00000005861	Snrnp200	99	88.373	ENSELUG00000018948	snrnp200	99	88.271	Esox_lucius
ENSDORG00000005861	Snrnp200	100	97.148	ENSFCAG00000010699	SNRNP200	100	97.148	Felis_catus
ENSDORG00000005861	Snrnp200	94	100.000	ENSFALG00000001368	-	94	100.000	Ficedula_albicollis
ENSDORG00000005861	Snrnp200	100	96.961	ENSFDAG00000004683	SNRNP200	100	96.961	Fukomys_damarensis
ENSDORG00000005861	Snrnp200	100	85.327	ENSFHEG00000003786	snrnp200	99	85.327	Fundulus_heteroclitus
ENSDORG00000005861	Snrnp200	100	87.174	ENSGMOG00000004881	snrnp200	99	87.127	Gadus_morhua
ENSDORG00000005861	Snrnp200	100	85.561	ENSGAFG00000010807	snrnp200	99	85.561	Gambusia_affinis
ENSDORG00000005861	Snrnp200	100	87.552	ENSGACG00000011474	snrnp200	99	87.459	Gasterosteus_aculeatus
ENSDORG00000005861	Snrnp200	100	93.886	ENSGAGG00000016069	SNRNP200	100	97.222	Gopherus_agassizii
ENSDORG00000005861	Snrnp200	100	97.148	ENSGGOG00000005174	SNRNP200	100	97.148	Gorilla_gorilla
ENSDORG00000005861	Snrnp200	97	84.984	ENSHBUG00000011322	snrnp200	99	85.029	Haplochromis_burtoni
ENSDORG00000005861	Snrnp200	100	96.961	ENSHGLG00000006654	SNRNP200	100	96.961	Heterocephalus_glaber_female
ENSDORG00000005861	Snrnp200	100	96.961	ENSHGLG00100018594	SNRNP200	100	96.961	Heterocephalus_glaber_male
ENSDORG00000005861	Snrnp200	100	97.101	ENSSTOG00000016351	SNRNP200	100	97.101	Ictidomys_tridecemlineatus
ENSDORG00000005861	Snrnp200	100	97.008	ENSJJAG00000023659	Snrnp200	100	97.008	Jaculus_jaculus
ENSDORG00000005861	Snrnp200	100	85.095	ENSKMAG00000003665	snrnp200	99	85.095	Kryptolebias_marmoratus
ENSDORG00000005861	Snrnp200	100	87.804	ENSLBEG00000021585	snrnp200	99	87.804	Labrus_bergylta
ENSDORG00000005861	Snrnp200	83	94.559	ENSLACG00000000226	SNRNP200	99	94.559	Latimeria_chalumnae
ENSDORG00000005861	Snrnp200	100	89.808	ENSLOCG00000015198	snrnp200	99	89.808	Lepisosteus_oculatus
ENSDORG00000005861	Snrnp200	100	96.727	ENSLAFG00000015626	SNRNP200	100	96.727	Loxodonta_africana
ENSDORG00000005861	Snrnp200	100	97.101	ENSMFAG00000040174	SNRNP200	99	98.551	Macaca_fascicularis
ENSDORG00000005861	Snrnp200	100	97.101	ENSMMUG00000023261	SNRNP200	100	97.101	Macaca_mulatta
ENSDORG00000005861	Snrnp200	100	97.055	ENSMNEG00000032398	SNRNP200	100	97.055	Macaca_nemestrina
ENSDORG00000005861	Snrnp200	100	97.148	ENSMLEG00000019083	SNRNP200	99	98.551	Mandrillus_leucophaeus
ENSDORG00000005861	Snrnp200	100	87.809	ENSMAMG00000007851	snrnp200	99	87.763	Mastacembelus_armatus
ENSDORG00000005861	Snrnp200	97	84.984	ENSMZEG00005010787	snrnp200	99	85.029	Maylandia_zebra
ENSDORG00000005861	Snrnp200	97	94.396	ENSMGAG00000001831	SNRNP200	99	94.431	Meleagris_gallopavo
ENSDORG00000005861	Snrnp200	100	97.195	ENSMAUG00000011825	Snrnp200	100	97.195	Mesocricetus_auratus
ENSDORG00000005861	Snrnp200	100	97.101	ENSMICG00000004710	SNRNP200	100	97.101	Microcebus_murinus
ENSDORG00000005861	Snrnp200	100	95.697	ENSMOCG00000011814	Snrnp200	100	95.697	Microtus_ochrogaster
ENSDORG00000005861	Snrnp200	99	86.732	ENSMMOG00000014167	snrnp200	99	86.636	Mola_mola
ENSDORG00000005861	Snrnp200	100	96.260	ENSMODG00000008475	SNRNP200	100	96.260	Monodelphis_domestica
ENSDORG00000005861	Snrnp200	99	88.326	ENSMALG00000001973	snrnp200	99	88.224	Monopterus_albus
ENSDORG00000005861	Snrnp200	100	97.008	MGP_CAROLIEiJ_G0024250	Snrnp200	100	97.008	Mus_caroli
ENSDORG00000005861	Snrnp200	100	97.055	ENSMUSG00000003660	Snrnp200	100	97.055	Mus_musculus
ENSDORG00000005861	Snrnp200	100	97.101	MGP_PahariEiJ_G0025695	Snrnp200	100	97.101	Mus_pahari
ENSDORG00000005861	Snrnp200	100	97.055	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSDORG00000005861	Snrnp200	100	97.055	ENSMPUG00000008949	SNRNP200	100	97.055	Mustela_putorius_furo
ENSDORG00000005861	Snrnp200	100	96.500	ENSMLUG00000010493	SNRNP200	100	96.500	Myotis_lucifugus
ENSDORG00000005861	Snrnp200	100	92.894	ENSMLUG00000027511	-	100	92.894	Myotis_lucifugus
ENSDORG00000005861	Snrnp200	100	97.242	ENSNGAG00000021993	Snrnp200	100	97.242	Nannospalax_galili
ENSDORG00000005861	Snrnp200	92	90.104	ENSNBRG00000017960	snrnp200	98	90.156	Neolamprologus_brichardi
ENSDORG00000005861	Snrnp200	100	92.340	ENSNLEG00000000025	SNRNP200	100	92.479	Nomascus_leucogenys
ENSDORG00000005861	Snrnp200	100	98.611	ENSMEUG00000010532	SNRNP200	79	98.611	Notamacropus_eugenii
ENSDORG00000005861	Snrnp200	100	93.221	ENSOPRG00000015464	SNRNP200	100	93.221	Ochotona_princeps
ENSDORG00000005861	Snrnp200	100	96.821	ENSODEG00000008366	SNRNP200	100	96.821	Octodon_degus
ENSDORG00000005861	Snrnp200	99	88.045	ENSONIG00000010714	snrnp200	99	87.944	Oreochromis_niloticus
ENSDORG00000005861	Snrnp200	100	97.101	ENSOCUG00000009864	SNRNP200	100	97.101	Oryctolagus_cuniculus
ENSDORG00000005861	Snrnp200	100	87.897	ENSORLG00000012286	snrnp200	100	87.897	Oryzias_latipes
ENSDORG00000005861	Snrnp200	100	87.991	ENSORLG00020004648	snrnp200	100	87.991	Oryzias_latipes_hni
ENSDORG00000005861	Snrnp200	100	87.944	ENSORLG00015019114	snrnp200	100	90.200	Oryzias_latipes_hsok
ENSDORG00000005861	Snrnp200	99	88.139	ENSOMEG00000011834	snrnp200	99	88.037	Oryzias_melastigma
ENSDORG00000005861	Snrnp200	100	97.148	ENSOGAG00000006879	SNRNP200	100	97.148	Otolemur_garnettii
ENSDORG00000005861	Snrnp200	100	95.792	ENSOARG00000013949	SNRNP200	100	95.792	Ovis_aries
ENSDORG00000005861	Snrnp200	100	97.148	ENSPPAG00000041559	SNRNP200	100	97.148	Pan_paniscus
ENSDORG00000005861	Snrnp200	100	97.148	ENSPPRG00000004435	SNRNP200	100	97.148	Panthera_pardus
ENSDORG00000005861	Snrnp200	100	96.681	ENSPTIG00000006380	SNRNP200	100	96.681	Panthera_tigris_altaica
ENSDORG00000005861	Snrnp200	100	97.148	ENSPTRG00000012230	SNRNP200	100	97.148	Pan_troglodytes
ENSDORG00000005861	Snrnp200	100	97.101	ENSPANG00000006017	SNRNP200	100	97.101	Papio_anubis
ENSDORG00000005861	Snrnp200	100	88.551	ENSPKIG00000014762	snrnp200	99	88.551	Paramormyrops_kingsleyae
ENSDORG00000005861	Snrnp200	100	93.931	ENSPSIG00000008580	SNRNP200	100	93.931	Pelodiscus_sinensis
ENSDORG00000005861	Snrnp200	100	96.260	ENSPCIG00000023050	SNRNP200	100	96.260	Phascolarctos_cinereus
ENSDORG00000005861	Snrnp200	100	87.903	ENSPFOG00000015110	snrnp200	99	87.903	Poecilia_formosa
ENSDORG00000005861	Snrnp200	97	87.336	ENSPLAG00000006711	snrnp200	99	87.336	Poecilia_latipinna
ENSDORG00000005861	Snrnp200	97	87.281	ENSPMEG00000021166	snrnp200	99	87.281	Poecilia_mexicana
ENSDORG00000005861	Snrnp200	100	87.991	ENSPREG00000008875	snrnp200	99	87.991	Poecilia_reticulata
ENSDORG00000005861	Snrnp200	100	97.148	ENSPPYG00000012068	SNRNP200	100	97.148	Pongo_abelii
ENSDORG00000005861	Snrnp200	93	100.000	ENSPCAG00000008536	SNRNP200	83	100.000	Procavia_capensis
ENSDORG00000005861	Snrnp200	100	97.148	ENSPCOG00000024608	SNRNP200	100	97.148	Propithecus_coquereli
ENSDORG00000005861	Snrnp200	96	98.061	ENSPVAG00000005860	SNRNP200	93	98.061	Pteropus_vampyrus
ENSDORG00000005861	Snrnp200	99	83.544	ENSPNYG00000017476	snrnp200	99	83.458	Pundamilia_nyererei
ENSDORG00000005861	Snrnp200	100	83.598	ENSPNAG00000010998	snrnp200	99	83.598	Pygocentrus_nattereri
ENSDORG00000005861	Snrnp200	100	97.195	ENSRNOG00000012157	Snrnp200	100	97.195	Rattus_norvegicus
ENSDORG00000005861	Snrnp200	100	97.148	ENSRBIG00000044690	-	100	97.148	Rhinopithecus_bieti
ENSDORG00000005861	Snrnp200	100	97.148	ENSRROG00000037952	-	100	97.148	Rhinopithecus_roxellana
ENSDORG00000005861	Snrnp200	100	97.101	ENSSBOG00000035471	SNRNP200	100	97.101	Saimiri_boliviensis_boliviensis
ENSDORG00000005861	Snrnp200	97	96.087	ENSSHAG00000000758	SNRNP200	100	96.087	Sarcophilus_harrisii
ENSDORG00000005861	Snrnp200	99	89.076	ENSSFOG00015018826	snrnp200	99	88.972	Scleropages_formosus
ENSDORG00000005861	Snrnp200	99	87.998	ENSSMAG00000005463	snrnp200	99	87.897	Scophthalmus_maximus
ENSDORG00000005861	Snrnp200	99	88.279	ENSSDUG00000021410	snrnp200	99	88.178	Seriola_dumerili
ENSDORG00000005861	Snrnp200	99	88.233	ENSSLDG00000010884	snrnp200	99	88.131	Seriola_lalandi_dorsalis
ENSDORG00000005861	Snrnp200	95	95.006	ENSSARG00000010728	SNRNP200	96	95.006	Sorex_araneus
ENSDORG00000005861	Snrnp200	100	94.857	ENSSPUG00000003726	-	100	94.857	Sphenodon_punctatus
ENSDORG00000005861	Snrnp200	99	88.326	ENSSPAG00000001842	snrnp200	99	88.224	Stegastes_partitus
ENSDORG00000005861	Snrnp200	100	96.961	ENSSSCG00000008127	SNRNP200	100	96.961	Sus_scrofa
ENSDORG00000005861	Snrnp200	99	84.691	ENSTGUG00000014475	-	100	84.691	Taeniopygia_guttata
ENSDORG00000005861	Snrnp200	99	87.951	ENSTRUG00000001307	snrnp200	99	87.850	Takifugu_rubripes
ENSDORG00000005861	Snrnp200	100	86.856	ENSTNIG00000004320	snrnp200	100	86.856	Tetraodon_nigroviridis
ENSDORG00000005861	Snrnp200	81	100.000	ENSTBEG00000003329	-	64	100.000	Tupaia_belangeri
ENSDORG00000005861	Snrnp200	100	97.053	ENSTTRG00000004983	SNRNP200	100	97.053	Tursiops_truncatus
ENSDORG00000005861	Snrnp200	75	95.319	ENSUAMG00000008395	-	95	95.319	Ursus_americanus
ENSDORG00000005861	Snrnp200	100	97.148	ENSUMAG00000012385	SNRNP200	100	97.148	Ursus_maritimus
ENSDORG00000005861	Snrnp200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSDORG00000005861	Snrnp200	100	97.198	ENSVVUG00000026247	SNRNP200	100	97.198	Vulpes_vulpes
ENSDORG00000005861	Snrnp200	100	91.787	ENSXETG00000001243	snrnp200	100	91.741	Xenopus_tropicalis
ENSDORG00000005861	Snrnp200	97	87.714	ENSXMAG00000002058	snrnp200	98	87.714	Xiphophorus_maculatus