EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000005898 (Gene tree)
Gene ID: 105988064
Gene Symbol: Cstf3
Alias: 4732468G05Rik
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 63551 bases
Position: chrKN672392.1:11086095-11149645
Accession: 105988064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005525	Suf	PF05843.14	2.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005900	-	2034	XM_013019555	ENSDORP00000005525	677 (aa)	XP_012875009	UPI000BAD197D

Gene Model

Click here to download ENSDORG00000005898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005898	Cstf3	99	92.102	ENSG00000176102	CSTF3	99	98.889	Homo_sapiens
ENSDORG00000005898	Cstf3	99	84.767	ENSAPOG00000014054	cstf3	99	84.767	Acanthochromis_polyacanthus
ENSDORG00000005898	Cstf3	99	91.961	ENSAMEG00000007187	CSTF3	98	91.961	Ailuropoda_melanoleuca
ENSDORG00000005898	Cstf3	87	79.360	ENSACIG00000005539	cstf3	100	79.360	Amphilophus_citrinellus
ENSDORG00000005898	Cstf3	99	84.062	ENSAOCG00000010930	cstf3	99	84.062	Amphiprion_ocellaris
ENSDORG00000005898	Cstf3	99	84.485	ENSAPEG00000007903	cstf3	99	84.485	Amphiprion_percula
ENSDORG00000005898	Cstf3	99	84.344	ENSATEG00000000190	cstf3	99	84.344	Anabas_testudineus
ENSDORG00000005898	Cstf3	99	90.127	ENSAPLG00000007217	CSTF3	100	90.127	Anas_platyrhynchos
ENSDORG00000005898	Cstf3	99	88.575	ENSACAG00000002823	CSTF3	99	88.575	Anolis_carolinensis
ENSDORG00000005898	Cstf3	99	92.102	ENSANAG00000020699	CSTF3	100	92.800	Aotus_nancymaae
ENSDORG00000005898	Cstf3	99	84.278	ENSACLG00000007820	cstf3	99	83.636	Astatotilapia_calliptera
ENSDORG00000005898	Cstf3	99	86.037	ENSAMXG00000014198	cstf3	99	86.037	Astyanax_mexicanus
ENSDORG00000005898	Cstf3	99	92.102	ENSBTAG00000008617	CSTF3	100	91.704	Bos_taurus
ENSDORG00000005898	Cstf3	98	45.816	WBGene00006307	suf-1	99	45.816	Caenorhabditis_elegans
ENSDORG00000005898	Cstf3	99	92.102	ENSCJAG00000005533	CSTF3	100	92.800	Callithrix_jacchus
ENSDORG00000005898	Cstf3	99	92.102	ENSCAFG00000007264	CSTF3	99	92.102	Canis_familiaris
ENSDORG00000005898	Cstf3	99	92.102	ENSCAFG00020002715	CSTF3	99	91.961	Canis_lupus_dingo
ENSDORG00000005898	Cstf3	98	91.903	ENSCHIG00000016418	CSTF3	100	92.800	Capra_hircus
ENSDORG00000005898	Cstf3	99	91.819	ENSTSYG00000000451	CSTF3	100	92.480	Carlito_syrichta
ENSDORG00000005898	Cstf3	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSDORG00000005898	Cstf3	99	91.831	ENSCPOG00000005545	CSTF3	99	91.831	Cavia_porcellus
ENSDORG00000005898	Cstf3	99	92.102	ENSCCAG00000024790	CSTF3	100	92.800	Cebus_capucinus
ENSDORG00000005898	Cstf3	99	92.948	ENSCATG00000007080	CSTF3	100	92.800	Cercocebus_atys
ENSDORG00000005898	Cstf3	99	92.102	ENSCLAG00000016179	CSTF3	99	92.102	Chinchilla_lanigera
ENSDORG00000005898	Cstf3	83	98.976	ENSCHOG00000002497	CSTF3	79	98.976	Choloepus_hoffmanni
ENSDORG00000005898	Cstf3	99	89.986	ENSCPBG00000006753	CSTF3	99	89.986	Chrysemys_picta_bellii
ENSDORG00000005898	Cstf3	99	56.643	ENSCING00000006401	-	98	56.643	Ciona_intestinalis
ENSDORG00000005898	Cstf3	99	56.764	ENSCSAVG00000004851	-	100	56.764	Ciona_savignyi
ENSDORG00000005898	Cstf3	99	92.948	ENSCANG00000035468	CSTF3	100	92.800	Colobus_angolensis_palliatus
ENSDORG00000005898	Cstf3	99	91.678	ENSCGRG00001014773	Cstf3	99	91.678	Cricetulus_griseus_chok1gshd
ENSDORG00000005898	Cstf3	99	91.678	ENSCGRG00000004142	Cstf3	99	91.678	Cricetulus_griseus_crigri
ENSDORG00000005898	Cstf3	99	84.344	ENSCSEG00000014283	cstf3	99	84.344	Cynoglossus_semilaevis
ENSDORG00000005898	Cstf3	99	83.216	ENSCVAG00000019739	cstf3	99	83.216	Cyprinodon_variegatus
ENSDORG00000005898	Cstf3	99	84.062	ENSDARG00000018904	cstf3	99	84.062	Danio_rerio
ENSDORG00000005898	Cstf3	99	91.678	ENSDNOG00000007366	CSTF3	99	91.678	Dasypus_novemcinctus
ENSDORG00000005898	Cstf3	99	53.243	FBgn0003559	su(f)	99	53.243	Drosophila_melanogaster
ENSDORG00000005898	Cstf3	83	91.806	ENSETEG00000017097	CSTF3	83	91.806	Echinops_telfairi
ENSDORG00000005898	Cstf3	84	67.822	ENSEBUG00000015459	cstf3	96	67.822	Eptatretus_burgeri
ENSDORG00000005898	Cstf3	99	92.243	ENSEASG00005019884	CSTF3	100	91.869	Equus_asinus_asinus
ENSDORG00000005898	Cstf3	99	92.243	ENSECAG00000023338	CSTF3	100	91.869	Equus_caballus
ENSDORG00000005898	Cstf3	99	88.011	ENSEEUG00000015167	CSTF3	99	88.011	Erinaceus_europaeus
ENSDORG00000005898	Cstf3	99	83.216	ENSELUG00000023393	cstf3	99	83.216	Esox_lucius
ENSDORG00000005898	Cstf3	99	91.961	ENSFCAG00000030711	CSTF3	99	91.961	Felis_catus
ENSDORG00000005898	Cstf3	93	90.240	ENSFALG00000010764	CSTF3	100	88.344	Ficedula_albicollis
ENSDORG00000005898	Cstf3	99	91.961	ENSFDAG00000012082	CSTF3	99	91.961	Fukomys_damarensis
ENSDORG00000005898	Cstf3	100	82.657	ENSFHEG00000020623	cstf3	99	82.657	Fundulus_heteroclitus
ENSDORG00000005898	Cstf3	99	82.394	ENSGMOG00000012275	cstf3	99	82.394	Gadus_morhua
ENSDORG00000005898	Cstf3	99	90.550	ENSGALG00000011685	CSTF3	99	90.550	Gallus_gallus
ENSDORG00000005898	Cstf3	100	82.937	ENSGAFG00000002181	cstf3	99	82.937	Gambusia_affinis
ENSDORG00000005898	Cstf3	99	83.780	ENSGACG00000015997	cstf3	99	83.780	Gasterosteus_aculeatus
ENSDORG00000005898	Cstf3	99	89.986	ENSGAGG00000006200	CSTF3	99	89.986	Gopherus_agassizii
ENSDORG00000005898	Cstf3	99	87.588	ENSGGOG00000026591	CSTF3	99	87.588	Gorilla_gorilla
ENSDORG00000005898	Cstf3	99	84.278	ENSHBUG00000016656	cstf3	99	83.636	Haplochromis_burtoni
ENSDORG00000005898	Cstf3	99	91.819	ENSHGLG00000017834	CSTF3	99	91.819	Heterocephalus_glaber_female
ENSDORG00000005898	Cstf3	99	91.819	ENSHGLG00100018042	CSTF3	99	91.819	Heterocephalus_glaber_male
ENSDORG00000005898	Cstf3	99	84.017	ENSHCOG00000015218	cstf3	99	84.062	Hippocampus_comes
ENSDORG00000005898	Cstf3	99	84.000	ENSIPUG00000013170	CSTF3	99	84.000	Ictalurus_punctatus
ENSDORG00000005898	Cstf3	99	92.102	ENSSTOG00000013306	CSTF3	99	92.102	Ictidomys_tridecemlineatus
ENSDORG00000005898	Cstf3	99	80.395	ENSJJAG00000018430	Cstf3	98	80.395	Jaculus_jaculus
ENSDORG00000005898	Cstf3	99	82.889	ENSKMAG00000010916	cstf3	99	82.889	Kryptolebias_marmoratus
ENSDORG00000005898	Cstf3	99	83.498	ENSLBEG00000002306	cstf3	99	83.498	Labrus_bergylta
ENSDORG00000005898	Cstf3	99	86.883	ENSLACG00000017296	CSTF3	99	86.883	Latimeria_chalumnae
ENSDORG00000005898	Cstf3	99	85.896	ENSLOCG00000004415	cstf3	99	85.896	Lepisosteus_oculatus
ENSDORG00000005898	Cstf3	99	91.819	ENSLAFG00000008712	CSTF3	99	91.819	Loxodonta_africana
ENSDORG00000005898	Cstf3	99	92.948	ENSMFAG00000029516	CSTF3	100	92.800	Macaca_fascicularis
ENSDORG00000005898	Cstf3	99	92.102	ENSMMUG00000002542	CSTF3	99	92.102	Macaca_mulatta
ENSDORG00000005898	Cstf3	99	92.948	ENSMNEG00000021807	CSTF3	100	92.800	Macaca_nemestrina
ENSDORG00000005898	Cstf3	99	92.948	ENSMLEG00000039594	CSTF3	100	92.800	Mandrillus_leucophaeus
ENSDORG00000005898	Cstf3	99	84.062	ENSMAMG00000020423	cstf3	99	84.062	Mastacembelus_armatus
ENSDORG00000005898	Cstf3	99	84.344	ENSMZEG00005012082	cstf3	99	84.344	Maylandia_zebra
ENSDORG00000005898	Cstf3	99	90.550	ENSMGAG00000001383	CSTF3	99	90.550	Meleagris_gallopavo
ENSDORG00000005898	Cstf3	99	91.537	ENSMAUG00000002487	Cstf3	99	91.537	Mesocricetus_auratus
ENSDORG00000005898	Cstf3	99	91.819	ENSMICG00000004784	CSTF3	100	92.480	Microcebus_murinus
ENSDORG00000005898	Cstf3	99	91.678	ENSMOCG00000017583	Cstf3	99	91.678	Microtus_ochrogaster
ENSDORG00000005898	Cstf3	99	83.921	ENSMMOG00000016026	cstf3	94	83.921	Mola_mola
ENSDORG00000005898	Cstf3	99	77.825	ENSMODG00000025205	-	99	77.825	Monodelphis_domestica
ENSDORG00000005898	Cstf3	99	90.973	ENSMODG00000009745	-	99	90.973	Monodelphis_domestica
ENSDORG00000005898	Cstf3	99	84.203	ENSMALG00000012050	cstf3	99	84.203	Monopterus_albus
ENSDORG00000005898	Cstf3	99	91.678	MGP_CAROLIEiJ_G0024026	Cstf3	99	91.678	Mus_caroli
ENSDORG00000005898	Cstf3	99	91.678	ENSMUSG00000027176	Cstf3	99	91.678	Mus_musculus
ENSDORG00000005898	Cstf3	99	91.678	MGP_PahariEiJ_G0025464	Cstf3	99	91.678	Mus_pahari
ENSDORG00000005898	Cstf3	99	91.678	MGP_SPRETEiJ_G0024939	Cstf3	99	91.678	Mus_spretus
ENSDORG00000005898	Cstf3	99	91.961	ENSMPUG00000011457	CSTF3	99	91.961	Mustela_putorius_furo
ENSDORG00000005898	Cstf3	99	91.819	ENSMLUG00000003073	-	99	91.819	Myotis_lucifugus
ENSDORG00000005898	Cstf3	99	88.858	ENSMLUG00000026022	-	99	88.858	Myotis_lucifugus
ENSDORG00000005898	Cstf3	99	91.678	ENSNGAG00000010677	Cstf3	99	91.678	Nannospalax_galili
ENSDORG00000005898	Cstf3	87	84.320	ENSNBRG00000007345	cstf3	100	84.320	Neolamprologus_brichardi
ENSDORG00000005898	Cstf3	99	92.102	ENSNLEG00000017901	CSTF3	100	92.800	Nomascus_leucogenys
ENSDORG00000005898	Cstf3	70	86.328	ENSMEUG00000005640	-	98	86.328	Notamacropus_eugenii
ENSDORG00000005898	Cstf3	64	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSDORG00000005898	Cstf3	99	91.961	ENSODEG00000016737	-	99	91.961	Octodon_degus
ENSDORG00000005898	Cstf3	86	81.613	ENSODEG00000006311	-	95	81.613	Octodon_degus
ENSDORG00000005898	Cstf3	99	84.278	ENSONIG00000005563	cstf3	99	83.636	Oreochromis_niloticus
ENSDORG00000005898	Cstf3	88	90.679	ENSOANG00000015140	CSTF3	97	90.679	Ornithorhynchus_anatinus
ENSDORG00000005898	Cstf3	99	91.819	ENSOCUG00000015417	CSTF3	99	91.819	Oryctolagus_cuniculus
ENSDORG00000005898	Cstf3	100	83.217	ENSORLG00000009762	cstf3	99	83.217	Oryzias_latipes
ENSDORG00000005898	Cstf3	100	83.217	ENSORLG00020005540	cstf3	99	84.181	Oryzias_latipes_hni
ENSDORG00000005898	Cstf3	100	83.077	ENSORLG00015003551	cstf3	99	83.475	Oryzias_latipes_hsok
ENSDORG00000005898	Cstf3	100	82.937	ENSOMEG00000003848	cstf3	99	82.937	Oryzias_melastigma
ENSDORG00000005898	Cstf3	99	91.573	ENSOGAG00000010229	CSTF3	99	91.573	Otolemur_garnettii
ENSDORG00000005898	Cstf3	88	92.868	ENSOARG00000017271	CSTF3	97	92.868	Ovis_aries
ENSDORG00000005898	Cstf3	99	89.845	ENSPPAG00000027358	CSTF3	99	89.845	Pan_paniscus
ENSDORG00000005898	Cstf3	99	91.961	ENSPPRG00000016852	CSTF3	99	91.961	Panthera_pardus
ENSDORG00000005898	Cstf3	99	91.961	ENSPTIG00000008716	CSTF3	99	91.961	Panthera_tigris_altaica
ENSDORG00000005898	Cstf3	99	92.102	ENSPTRG00000003485	CSTF3	99	92.102	Pan_troglodytes
ENSDORG00000005898	Cstf3	99	92.948	ENSPANG00000013722	CSTF3	99	92.948	Papio_anubis
ENSDORG00000005898	Cstf3	99	85.331	ENSPKIG00000023648	cstf3	99	85.331	Paramormyrops_kingsleyae
ENSDORG00000005898	Cstf3	99	89.704	ENSPSIG00000009173	CSTF3	99	89.704	Pelodiscus_sinensis
ENSDORG00000005898	Cstf3	74	86.085	ENSPMGG00000000164	cstf3	98	86.085	Periophthalmus_magnuspinnatus
ENSDORG00000005898	Cstf3	99	91.537	ENSPEMG00000011481	Cstf3	99	91.537	Peromyscus_maniculatus_bairdii
ENSDORG00000005898	Cstf3	99	73.773	ENSPMAG00000007282	cstf3	99	73.315	Petromyzon_marinus
ENSDORG00000005898	Cstf3	100	74.162	ENSPCIG00000030419	-	90	74.860	Phascolarctos_cinereus
ENSDORG00000005898	Cstf3	99	88.451	ENSPCIG00000026406	-	100	91.360	Phascolarctos_cinereus
ENSDORG00000005898	Cstf3	99	83.780	ENSPFOG00000017239	cstf3	99	83.780	Poecilia_formosa
ENSDORG00000005898	Cstf3	99	84.344	ENSPLAG00000009456	cstf3	99	84.344	Poecilia_latipinna
ENSDORG00000005898	Cstf3	99	84.344	ENSPMEG00000010320	cstf3	99	84.344	Poecilia_mexicana
ENSDORG00000005898	Cstf3	99	83.780	ENSPREG00000013549	cstf3	99	83.780	Poecilia_reticulata
ENSDORG00000005898	Cstf3	99	92.102	ENSPPYG00000003375	CSTF3	99	92.102	Pongo_abelii
ENSDORG00000005898	Cstf3	68	99.029	ENSPCAG00000008025	-	70	99.029	Procavia_capensis
ENSDORG00000005898	Cstf3	99	88.011	ENSPCOG00000014417	CSTF3	99	88.011	Propithecus_coquereli
ENSDORG00000005898	Cstf3	99	88.152	ENSPVAG00000002350	CSTF3	99	88.152	Pteropus_vampyrus
ENSDORG00000005898	Cstf3	99	84.344	ENSPNYG00000018259	cstf3	99	84.344	Pundamilia_nyererei
ENSDORG00000005898	Cstf3	99	85.190	ENSPNAG00000020182	cstf3	99	85.190	Pygocentrus_nattereri
ENSDORG00000005898	Cstf3	87	92.320	ENSRNOG00000012089	Cstf3	100	92.320	Rattus_norvegicus
ENSDORG00000005898	Cstf3	99	92.948	ENSRBIG00000044258	CSTF3	100	92.800	Rhinopithecus_bieti
ENSDORG00000005898	Cstf3	99	92.948	ENSRROG00000043450	CSTF3	100	92.800	Rhinopithecus_roxellana
ENSDORG00000005898	Cstf3	99	92.102	ENSSBOG00000024764	CSTF3	100	92.800	Saimiri_boliviensis_boliviensis
ENSDORG00000005898	Cstf3	99	79.577	ENSSHAG00000003135	-	98	79.577	Sarcophilus_harrisii
ENSDORG00000005898	Cstf3	99	90.336	ENSSHAG00000018128	-	99	90.336	Sarcophilus_harrisii
ENSDORG00000005898	Cstf3	99	85.190	ENSSFOG00015022133	cstf3	99	85.190	Scleropages_formosus
ENSDORG00000005898	Cstf3	99	83.498	ENSSMAG00000002197	cstf3	99	83.498	Scophthalmus_maximus
ENSDORG00000005898	Cstf3	99	84.203	ENSSDUG00000020426	cstf3	99	84.203	Seriola_dumerili
ENSDORG00000005898	Cstf3	99	84.203	ENSSLDG00000025649	cstf3	100	84.438	Seriola_lalandi_dorsalis
ENSDORG00000005898	Cstf3	99	91.678	ENSSARG00000000391	CSTF3	99	91.678	Sorex_araneus
ENSDORG00000005898	Cstf3	97	89.017	ENSSPUG00000010546	CSTF3	100	89.017	Sphenodon_punctatus
ENSDORG00000005898	Cstf3	99	84.203	ENSSPAG00000004958	cstf3	99	84.203	Stegastes_partitus
ENSDORG00000005898	Cstf3	99	91.457	ENSSSCG00000040954	CSTF3	99	91.457	Sus_scrofa
ENSDORG00000005898	Cstf3	99	89.845	ENSTGUG00000005010	CSTF3	100	89.845	Taeniopygia_guttata
ENSDORG00000005898	Cstf3	99	83.216	ENSTRUG00000004959	cstf3	99	83.216	Takifugu_rubripes
ENSDORG00000005898	Cstf3	99	83.498	ENSTNIG00000013811	cstf3	98	83.498	Tetraodon_nigroviridis
ENSDORG00000005898	Cstf3	88	89.223	ENSTBEG00000001544	CSTF3	89	89.223	Tupaia_belangeri
ENSDORG00000005898	Cstf3	99	90.691	ENSTTRG00000016366	CSTF3	99	90.691	Tursiops_truncatus
ENSDORG00000005898	Cstf3	99	91.819	ENSUMAG00000018971	CSTF3	100	92.480	Ursus_maritimus
ENSDORG00000005898	Cstf3	99	91.949	ENSVPAG00000007800	CSTF3	99	91.949	Vicugna_pacos
ENSDORG00000005898	Cstf3	99	92.102	ENSVVUG00000014938	CSTF3	100	92.800	Vulpes_vulpes
ENSDORG00000005898	Cstf3	64	42.324	ENSXETG00000017946	-	99	42.324	Xenopus_tropicalis
ENSDORG00000005898	Cstf3	88	72.188	ENSXETG00000021399	cstf3	99	73.744	Xenopus_tropicalis
ENSDORG00000005898	Cstf3	87	83.520	ENSXCOG00000011741	cstf3	100	83.520	Xiphophorus_couchianus
ENSDORG00000005898	Cstf3	100	83.077	ENSXMAG00000009545	cstf3	99	83.077	Xiphophorus_maculatus