EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000005923 (Gene tree)
Gene ID: 105998406
Gene Symbol: Chd5
Alias: 4930532L22Rik|B230399N07Rik
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 45253 bases
Position: chrKN672352.1:3124692-3169944
Accession: 105998406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005548	ResIII	PF04851.15	3e-08	1	1
ENSDORP00000017407	ResIII	PF04851.15	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030463	-	5923	XM_013033107	ENSDORP00000017407	1928 (aa)	XP_012888561	UPI000BAD12CD
ENSDORT00000005924	-	5676	-	ENSDORP00000005548	1891 (aa)	-	UPI000BAD2B29

Gene Model

Click here to download ENSDORG00000005923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000005923	Chd5	99	69.845	ENSDORG00000010713	Chd3	93	71.521
ENSDORG00000005923	Chd5	97	71.185	ENSDORG00000001847	Chd4	94	71.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005923	Chd5	99	96.002	ENSG00000116254	CHD5	99	96.008	Homo_sapiens
ENSDORG00000005923	Chd5	99	94.658	ENSAMEG00000009880	CHD5	99	94.658	Ailuropoda_melanoleuca
ENSDORG00000005923	Chd5	95	78.836	ENSACIG00000012582	chd5	98	78.760	Amphilophus_citrinellus
ENSDORG00000005923	Chd5	95	79.781	ENSAOCG00000020356	chd5	93	78.704	Amphiprion_ocellaris
ENSDORG00000005923	Chd5	96	82.258	ENSAPLG00000015475	CHD5	98	82.293	Anas_platyrhynchos
ENSDORG00000005923	Chd5	100	82.522	ENSACAG00000002441	CHD5	96	83.413	Anolis_carolinensis
ENSDORG00000005923	Chd5	88	95.924	ENSANAG00000001078	CHD5	91	95.924	Aotus_nancymaae
ENSDORG00000005923	Chd5	95	75.881	ENSACLG00000003012	chd5	96	75.551	Astatotilapia_calliptera
ENSDORG00000005923	Chd5	88	82.117	ENSAMXG00000008921	chd5	98	82.104	Astyanax_mexicanus
ENSDORG00000005923	Chd5	94	96.154	ENSBTAG00000040477	CHD5	100	96.154	Bos_taurus
ENSDORG00000005923	Chd5	99	95.794	ENSCJAG00000000101	CHD5	99	95.801	Callithrix_jacchus
ENSDORG00000005923	Chd5	94	96.207	ENSCAFG00000019545	CHD5	100	96.207	Canis_familiaris
ENSDORG00000005923	Chd5	99	95.530	ENSCAFG00020008689	CHD5	96	95.537	Canis_lupus_dingo
ENSDORG00000005923	Chd5	99	93.977	ENSCHIG00000015027	CHD5	96	93.987	Capra_hircus
ENSDORG00000005923	Chd5	99	91.040	ENSTSYG00000033991	CHD5	99	90.909	Carlito_syrichta
ENSDORG00000005923	Chd5	100	95.029	ENSCAPG00000009294	CHD5	100	95.029	Cavia_aperea
ENSDORG00000005923	Chd5	100	95.029	ENSCPOG00000025080	CHD5	100	95.029	Cavia_porcellus
ENSDORG00000005923	Chd5	99	95.691	ENSCCAG00000024756	CHD5	99	95.697	Cebus_capucinus
ENSDORG00000005923	Chd5	99	94.964	ENSCATG00000043011	CHD5	99	94.971	Cercocebus_atys
ENSDORG00000005923	Chd5	100	95.697	ENSCLAG00000010589	CHD5	100	95.666	Chinchilla_lanigera
ENSDORG00000005923	Chd5	99	95.950	ENSCSAG00000000733	CHD5	99	95.956	Chlorocebus_sabaeus
ENSDORG00000005923	Chd5	94	90.570	ENSCPBG00000019363	CHD5	100	90.461	Chrysemys_picta_bellii
ENSDORG00000005923	Chd5	100	96.060	ENSCANG00000032302	CHD5	99	96.060	Colobus_angolensis_palliatus
ENSDORG00000005923	Chd5	56	96.984	ENSCGRG00001011042	Chd5	100	96.984	Cricetulus_griseus_chok1gshd
ENSDORG00000005923	Chd5	100	95.032	ENSCGRG00000011341	Chd5	100	94.292	Cricetulus_griseus_crigri
ENSDORG00000005923	Chd5	98	78.685	ENSDARG00000105083	chd5	97	80.547	Danio_rerio
ENSDORG00000005923	Chd5	95	68.091	ENSDARG00000025789	chd4b	96	67.756	Danio_rerio
ENSDORG00000005923	Chd5	100	90.617	ENSDNOG00000046342	CHD5	99	90.513	Dasypus_novemcinctus
ENSDORG00000005923	Chd5	99	93.815	ENSEASG00005021464	CHD5	99	94.779	Equus_asinus_asinus
ENSDORG00000005923	Chd5	99	93.399	ENSECAG00000025043	CHD5	99	97.119	Equus_caballus
ENSDORG00000005923	Chd5	78	99.070	ENSEEUG00000002772	CHD5	77	99.070	Erinaceus_europaeus
ENSDORG00000005923	Chd5	95	77.059	ENSELUG00000010742	chd5	90	91.628	Esox_lucius
ENSDORG00000005923	Chd5	99	95.065	ENSFCAG00000006319	CHD5	99	94.971	Felis_catus
ENSDORG00000005923	Chd5	99	88.223	ENSFALG00000009740	CHD5	99	87.862	Ficedula_albicollis
ENSDORG00000005923	Chd5	99	95.122	ENSFDAG00000012881	CHD5	96	94.325	Fukomys_damarensis
ENSDORG00000005923	Chd5	100	88.159	ENSGALG00000000747	CHD5	99	87.539	Gallus_gallus
ENSDORG00000005923	Chd5	57	82.461	ENSGACG00000004389	chd5	93	82.553	Gasterosteus_aculeatus
ENSDORG00000005923	Chd5	97	87.301	ENSGAGG00000001590	CHD5	99	95.122	Gopherus_agassizii
ENSDORG00000005923	Chd5	100	96.008	ENSGGOG00000000708	CHD5	100	96.008	Gorilla_gorilla
ENSDORG00000005923	Chd5	95	76.687	ENSHBUG00000013453	chd5	96	76.358	Haplochromis_burtoni
ENSDORG00000005923	Chd5	99	95.233	ENSHGLG00000018184	CHD5	99	95.488	Heterocephalus_glaber_female
ENSDORG00000005923	Chd5	100	88.682	ENSHGLG00100013261	CHD5	97	88.722	Heterocephalus_glaber_male
ENSDORG00000005923	Chd5	95	79.008	ENSIPUG00000005446	chd5	98	79.111	Ictalurus_punctatus
ENSDORG00000005923	Chd5	100	96.371	ENSSTOG00000002778	CHD5	100	96.353	Ictidomys_tridecemlineatus
ENSDORG00000005923	Chd5	99	95.379	ENSJJAG00000019072	Chd5	99	94.609	Jaculus_jaculus
ENSDORG00000005923	Chd5	98	82.252	ENSLOCG00000004944	chd5	95	81.466	Lepisosteus_oculatus
ENSDORG00000005923	Chd5	99	95.641	ENSLAFG00000006348	CHD5	99	95.641	Loxodonta_africana
ENSDORG00000005923	Chd5	100	96.008	ENSMFAG00000033993	CHD5	100	96.372	Macaca_fascicularis
ENSDORG00000005923	Chd5	100	95.956	ENSMMUG00000016838	CHD5	99	95.956	Macaca_mulatta
ENSDORG00000005923	Chd5	99	96.002	ENSMNEG00000040044	CHD5	99	96.008	Macaca_nemestrina
ENSDORG00000005923	Chd5	100	92.737	ENSMLEG00000039166	CHD5	100	92.737	Mandrillus_leucophaeus
ENSDORG00000005923	Chd5	95	74.822	ENSMZEG00005000841	chd5	90	81.767	Maylandia_zebra
ENSDORG00000005923	Chd5	99	87.901	ENSMGAG00000001055	CHD5	99	87.642	Meleagris_gallopavo
ENSDORG00000005923	Chd5	99	92.523	ENSMICG00000017862	CHD5	99	92.535	Microcebus_murinus
ENSDORG00000005923	Chd5	99	94.976	ENSMOCG00000011049	Chd5	99	94.186	Microtus_ochrogaster
ENSDORG00000005923	Chd5	87	80.964	ENSMODG00000006294	CHD5	78	93.541	Monodelphis_domestica
ENSDORG00000005923	Chd5	95	79.094	ENSMALG00000002831	chd5	96	77.566	Monopterus_albus
ENSDORG00000005923	Chd5	99	94.811	MGP_CAROLIEiJ_G0026857	Chd5	99	94.816	Mus_caroli
ENSDORG00000005923	Chd5	99	94.453	ENSMUSG00000005045	Chd5	99	94.354	Mus_musculus
ENSDORG00000005923	Chd5	99	94.762	MGP_PahariEiJ_G0029205	Chd5	99	94.767	Mus_pahari
ENSDORG00000005923	Chd5	99	94.815	MGP_SPRETEiJ_G0027850	Chd5	99	94.820	Mus_spretus
ENSDORG00000005923	Chd5	100	91.675	ENSMPUG00000007122	CHD5	99	91.625	Mustela_putorius_furo
ENSDORG00000005923	Chd5	99	94.862	ENSNGAG00000019812	Chd5	96	94.862	Nannospalax_galili
ENSDORG00000005923	Chd5	100	93.675	ENSNLEG00000010320	CHD5	100	93.468	Nomascus_leucogenys
ENSDORG00000005923	Chd5	88	88.973	ENSOPRG00000004304	CHD5	87	88.889	Ochotona_princeps
ENSDORG00000005923	Chd5	100	95.402	ENSODEG00000010262	CHD5	100	95.402	Octodon_degus
ENSDORG00000005923	Chd5	95	78.093	ENSONIG00000000619	chd5	93	77.802	Oreochromis_niloticus
ENSDORG00000005923	Chd5	85	81.215	ENSOANG00000001819	CHD5	98	72.454	Ornithorhynchus_anatinus
ENSDORG00000005923	Chd5	99	93.818	ENSOGAG00000005703	CHD5	99	93.828	Otolemur_garnettii
ENSDORG00000005923	Chd5	98	94.447	ENSOARG00000013425	CHD5	98	94.447	Ovis_aries
ENSDORG00000005923	Chd5	100	95.959	ENSPPAG00000034048	CHD5	100	95.959	Pan_paniscus
ENSDORG00000005923	Chd5	99	94.390	ENSPPRG00000009453	CHD5	99	94.298	Panthera_pardus
ENSDORG00000005923	Chd5	100	87.589	ENSPTIG00000013926	CHD5	99	87.640	Panthera_tigris_altaica
ENSDORG00000005923	Chd5	99	95.952	ENSPTRG00000000075	CHD5	99	95.959	Pan_troglodytes
ENSDORG00000005923	Chd5	99	96.158	ENSPANG00000006765	CHD5	99	96.164	Papio_anubis
ENSDORG00000005923	Chd5	95	78.680	ENSPKIG00000004282	chd5	98	78.045	Paramormyrops_kingsleyae
ENSDORG00000005923	Chd5	97	82.685	ENSPSIG00000006414	CHD5	99	82.989	Pelodiscus_sinensis
ENSDORG00000005923	Chd5	69	96.682	ENSPEMG00000014799	Chd5	100	96.682	Peromyscus_maniculatus_bairdii
ENSDORG00000005923	Chd5	100	90.801	ENSPCIG00000028310	CHD5	97	90.956	Phascolarctos_cinereus
ENSDORG00000005923	Chd5	95	76.726	ENSPLAG00000005343	chd5	99	73.569	Poecilia_latipinna
ENSDORG00000005923	Chd5	100	92.742	ENSPPYG00000001952	CHD5	100	92.742	Pongo_abelii
ENSDORG00000005923	Chd5	99	95.794	ENSPCOG00000022930	CHD5	99	95.801	Propithecus_coquereli
ENSDORG00000005923	Chd5	95	77.820	ENSPNYG00000003183	chd5	98	77.698	Pundamilia_nyererei
ENSDORG00000005923	Chd5	100	95.337	ENSRNOG00000011268	Chd5	99	94.609	Rattus_norvegicus
ENSDORG00000005923	Chd5	95	96.814	ENSRBIG00000032140	CHD5	95	96.814	Rhinopithecus_bieti
ENSDORG00000005923	Chd5	100	95.853	ENSRROG00000041146	CHD5	99	95.853	Rhinopithecus_roxellana
ENSDORG00000005923	Chd5	100	91.257	ENSSBOG00000001955	CHD5	100	96.088	Saimiri_boliviensis_boliviensis
ENSDORG00000005923	Chd5	98	85.383	ENSSHAG00000018641	CHD5	99	85.994	Sarcophilus_harrisii
ENSDORG00000005923	Chd5	98	78.556	ENSSFOG00015006296	chd5	92	86.770	Scleropages_formosus
ENSDORG00000005923	Chd5	95	78.513	ENSSDUG00000017526	chd5	92	91.163	Seriola_dumerili
ENSDORG00000005923	Chd5	98	81.701	ENSSPUG00000010622	CHD5	98	80.168	Sphenodon_punctatus
ENSDORG00000005923	Chd5	98	95.652	ENSSSCG00000003366	CHD5	100	95.932	Sus_scrofa
ENSDORG00000005923	Chd5	94	84.509	ENSTGUG00000002634	-	100	84.511	Taeniopygia_guttata
ENSDORG00000005923	Chd5	54	79.746	ENSTNIG00000004346	chd5	99	80.490	Tetraodon_nigroviridis
ENSDORG00000005923	Chd5	99	94.298	ENSTTRG00000010468	CHD5	99	94.217	Tursiops_truncatus
ENSDORG00000005923	Chd5	99	95.607	ENSUAMG00000024509	CHD5	97	95.911	Ursus_americanus
ENSDORG00000005923	Chd5	99	90.576	ENSUMAG00000024173	CHD5	98	90.759	Ursus_maritimus
ENSDORG00000005923	Chd5	99	94.502	ENSVVUG00000026480	CHD5	98	96.341	Vulpes_vulpes
ENSDORG00000005923	Chd5	98	80.588	ENSXETG00000002904	chd5	99	79.713	Xenopus_tropicalis
ENSDORG00000005923	Chd5	58	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus