EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000005950 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: UTP23%2C small subunit processome component
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 5662 bases
Position: chrKN672497.1:5558074-5563735
Accession: 105997703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005572	Fcf1	PF04900.12	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000005950	-	950	XM_013032217	ENSDORP00000005572	143 (aa)	XP_012887671	UPI000BAD0C9D

Gene Model

Click here to download ENSDORG00000005950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000005950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000005950	-	100	92.308	ENSDORG00000029054	-	55	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000005950	-	100	86.713	ENSG00000147679	UTP23	57	86.713	Homo_sapiens
ENSDORG00000005950	-	97	90.647	ENSAMEG00000010317	UTP23	56	90.647	Ailuropoda_melanoleuca
ENSDORG00000005950	-	100	86.713	ENSANAG00000025273	-	57	86.713	Aotus_nancymaae
ENSDORG00000005950	-	97	88.489	ENSANAG00000036252	-	54	88.489	Aotus_nancymaae
ENSDORG00000005950	-	99	87.324	ENSBTAG00000040422	UTP23	57	87.324	Bos_taurus
ENSDORG00000005950	-	100	87.413	ENSCJAG00000005903	UTP23	57	87.413	Callithrix_jacchus
ENSDORG00000005950	-	99	90.071	ENSCAFG00000000821	UTP23	57	90.071	Canis_familiaris
ENSDORG00000005950	-	99	90.071	ENSCAFG00020004174	UTP23	57	90.071	Canis_lupus_dingo
ENSDORG00000005950	-	99	88.732	ENSCHIG00000019828	UTP23	57	88.732	Capra_hircus
ENSDORG00000005950	-	99	86.620	ENSTSYG00000001644	UTP23	57	86.620	Carlito_syrichta
ENSDORG00000005950	-	99	75.694	ENSCPOG00000034561	UTP23	54	75.172	Cavia_porcellus
ENSDORG00000005950	-	100	88.811	ENSCCAG00000030228	UTP23	57	88.811	Cebus_capucinus
ENSDORG00000005950	-	100	87.413	ENSCATG00000035129	UTP23	57	87.413	Cercocebus_atys
ENSDORG00000005950	-	82	88.034	ENSCLAG00000000531	-	53	86.842	Chinchilla_lanigera
ENSDORG00000005950	-	97	85.106	ENSCLAG00000005108	-	57	85.106	Chinchilla_lanigera
ENSDORG00000005950	-	100	87.413	ENSCSAG00000010933	UTP23	57	87.413	Chlorocebus_sabaeus
ENSDORG00000005950	-	99	90.845	ENSCHOG00000003145	UTP23	57	90.845	Choloepus_hoffmanni
ENSDORG00000005950	-	64	41.489	ENSCING00000012577	-	52	39.130	Ciona_intestinalis
ENSDORG00000005950	-	98	87.857	ENSCANG00000028461	UTP23	52	87.857	Colobus_angolensis_palliatus
ENSDORG00000005950	-	99	80.282	ENSCGRG00001005218	Utp23	57	80.282	Cricetulus_griseus_chok1gshd
ENSDORG00000005950	-	95	90.511	ENSDNOG00000033602	UTP23	55	90.511	Dasypus_novemcinctus
ENSDORG00000005950	-	100	79.861	ENSETEG00000015401	-	57	73.427	Echinops_telfairi
ENSDORG00000005950	-	100	54.730	ENSETEG00000017109	-	58	51.370	Echinops_telfairi
ENSDORG00000005950	-	99	86.620	ENSEASG00005023141	UTP23	57	86.620	Equus_asinus_asinus
ENSDORG00000005950	-	99	88.732	ENSECAG00000026844	UTP23	57	88.028	Equus_caballus
ENSDORG00000005950	-	100	83.916	ENSEEUG00000004503	UTP23	57	83.916	Erinaceus_europaeus
ENSDORG00000005950	-	99	88.652	ENSFCAG00000036051	UTP23	57	88.652	Felis_catus
ENSDORG00000005950	-	100	58.333	ENSFALG00000002299	UTP23	57	58.333	Ficedula_albicollis
ENSDORG00000005950	-	99	87.500	ENSFDAG00000021034	UTP23	58	88.194	Fukomys_damarensis
ENSDORG00000005950	-	100	86.713	ENSGGOG00000013203	UTP23	57	86.713	Gorilla_gorilla
ENSDORG00000005950	-	99	76.389	ENSHGLG00000008717	-	58	77.778	Heterocephalus_glaber_female
ENSDORG00000005950	-	82	83.761	ENSHGLG00000017539	-	85	82.906	Heterocephalus_glaber_female
ENSDORG00000005950	-	99	83.333	ENSHGLG00000020901	-	54	83.333	Heterocephalus_glaber_female
ENSDORG00000005950	-	99	86.111	ENSHGLG00000004025	UTP23	58	86.111	Heterocephalus_glaber_female
ENSDORG00000005950	-	99	86.111	ENSHGLG00100018875	UTP23	58	86.111	Heterocephalus_glaber_male
ENSDORG00000005950	-	69	85.714	ENSHGLG00100012817	-	54	68.310	Heterocephalus_glaber_male
ENSDORG00000005950	-	82	83.761	ENSHGLG00100011465	-	85	82.906	Heterocephalus_glaber_male
ENSDORG00000005950	-	99	90.845	ENSSTOG00000001411	UTP23	57	90.845	Ictidomys_tridecemlineatus
ENSDORG00000005950	-	99	89.510	ENSLAFG00000001282	UTP23	57	89.510	Loxodonta_africana
ENSDORG00000005950	-	100	88.112	ENSMFAG00000003374	UTP23	57	88.112	Macaca_fascicularis
ENSDORG00000005950	-	100	88.112	ENSMMUG00000020284	UTP23	57	88.112	Macaca_mulatta
ENSDORG00000005950	-	100	88.112	ENSMNEG00000028668	UTP23	57	88.112	Macaca_nemestrina
ENSDORG00000005950	-	100	87.413	ENSMLEG00000032668	UTP23	54	87.413	Mandrillus_leucophaeus
ENSDORG00000005950	-	97	62.590	ENSMGAG00000012472	UTP23	56	62.590	Meleagris_gallopavo
ENSDORG00000005950	-	99	79.433	ENSMAUG00000017455	Utp23	99	78.723	Mesocricetus_auratus
ENSDORG00000005950	-	99	91.489	ENSMICG00000034720	UTP23	57	91.489	Microcebus_murinus
ENSDORG00000005950	-	100	67.808	ENSMODG00000004140	UTP23	58	67.808	Monodelphis_domestica
ENSDORG00000005950	-	99	80.986	MGP_CAROLIEiJ_G0019781	Utp23	100	80.986	Mus_caroli
ENSDORG00000005950	-	99	81.818	ENSMUSG00000022313	Utp23	100	81.818	Mus_musculus
ENSDORG00000005950	-	99	82.517	MGP_SPRETEiJ_G0020678	Utp23	56	82.517	Mus_spretus
ENSDORG00000005950	-	97	90.647	ENSMPUG00000000987	UTP23	56	90.647	Mustela_putorius_furo
ENSDORG00000005950	-	99	88.028	ENSMLUG00000004345	UTP23	57	88.028	Myotis_lucifugus
ENSDORG00000005950	-	100	86.713	ENSNLEG00000032995	UTP23	53	86.713	Nomascus_leucogenys
ENSDORG00000005950	-	99	77.465	ENSOPRG00000011227	UTP23	57	77.465	Ochotona_princeps
ENSDORG00000005950	-	99	81.250	ENSODEG00000018881	-	58	80.556	Octodon_degus
ENSDORG00000005950	-	75	61.111	ENSONIG00000013525	utp23	51	58.252	Oreochromis_niloticus
ENSDORG00000005950	-	99	87.324	ENSOCUG00000007541	UTP23	57	86.713	Oryctolagus_cuniculus
ENSDORG00000005950	-	99	82.270	ENSOGAG00000033060	-	100	82.270	Otolemur_garnettii
ENSDORG00000005950	-	99	87.234	ENSOGAG00000017024	UTP23	57	87.234	Otolemur_garnettii
ENSDORG00000005950	-	99	88.732	ENSOARG00000010483	UTP23	57	88.732	Ovis_aries
ENSDORG00000005950	-	100	86.713	ENSPPAG00000028660	UTP23	57	86.713	Pan_paniscus
ENSDORG00000005950	-	99	88.652	ENSPPRG00000024902	UTP23	57	88.652	Panthera_pardus
ENSDORG00000005950	-	99	88.652	ENSPTIG00000019925	UTP23	57	88.652	Panthera_tigris_altaica
ENSDORG00000005950	-	100	86.713	ENSPTRG00000020521	UTP23	53	86.713	Pan_troglodytes
ENSDORG00000005950	-	99	88.028	ENSPANG00000011559	UTP23	57	87.413	Papio_anubis
ENSDORG00000005950	-	91	57.252	ENSPKIG00000018790	utp23	54	52.593	Paramormyrops_kingsleyae
ENSDORG00000005950	-	100	87.413	ENSPPYG00000018831	UTP23	57	87.413	Pongo_abelii
ENSDORG00000005950	-	99	85.915	ENSPCAG00000009093	UTP23	57	85.915	Procavia_capensis
ENSDORG00000005950	-	99	92.199	ENSPCOG00000015084	-	100	92.199	Propithecus_coquereli
ENSDORG00000005950	-	99	90.141	ENSPVAG00000002661	UTP23	57	90.141	Pteropus_vampyrus
ENSDORG00000005950	-	99	77.778	ENSRNOG00000004387	Utp23	57	79.167	Rattus_norvegicus
ENSDORG00000005950	-	100	87.413	ENSRBIG00000026267	UTP23	57	87.413	Rhinopithecus_bieti
ENSDORG00000005950	-	100	87.413	ENSRROG00000028593	UTP23	57	87.413	Rhinopithecus_roxellana
ENSDORG00000005950	-	100	87.413	ENSSBOG00000018914	UTP23	57	87.413	Saimiri_boliviensis_boliviensis
ENSDORG00000005950	-	78	78.378	ENSSHAG00000015399	UTP23	57	78.378	Sarcophilus_harrisii
ENSDORG00000005950	-	99	84.138	ENSSSCG00000030493	UTP23	58	84.138	Sus_scrofa
ENSDORG00000005950	-	100	57.639	ENSTGUG00000012316	-	57	57.639	Taeniopygia_guttata
ENSDORG00000005950	-	82	61.017	ENSTGUG00000015403	-	50	61.017	Taeniopygia_guttata
ENSDORG00000005950	-	100	85.315	ENSTBEG00000008655	UTP23	57	85.315	Tupaia_belangeri
ENSDORG00000005950	-	99	86.620	ENSTTRG00000015295	UTP23	57	86.620	Tursiops_truncatus
ENSDORG00000005950	-	97	89.928	ENSUMAG00000020439	UTP23	56	89.928	Ursus_maritimus
ENSDORG00000005950	-	99	88.732	ENSVPAG00000009358	UTP23	57	88.732	Vicugna_pacos
ENSDORG00000005950	-	99	90.071	ENSVVUG00000015307	UTP23	57	90.071	Vulpes_vulpes