EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006185 (Gene tree)
Gene ID: 105985679
Gene Symbol: Prpf8
Alias: D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 45152 bases
Position: chrKN672377.1:7113639-7158790
Accession: 105985679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005792	RRM_4	PF10598.9	2.6e-48	1	1
ENSDORP00000005792	U5_2-snRNA_bdg	PF10597.9	4.7e-74	1	1
ENSDORP00000005792	PRO8NT	PF08082.11	8e-87	1	1
ENSDORP00000005792	PROCN	PF08083.11	2.1e-231	1	1
ENSDORP00000005792	PRP8_domainIV	PF12134.8	1.2e-100	1	1
ENSDORP00000005792	PROCT	PF08084.11	9.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000006186	-	5901	XM_013016312	ENSDORP00000005792	1966 (aa)	XP_012871766	UPI000BAD1B74

Gene Model

Click here to download ENSDORG00000006185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006185	Prpf8	96	99.432	ENSG00000174231	PRPF8	100	94.047	Homo_sapiens
ENSDORG00000006185	Prpf8	96	96.532	ENSAPOG00000010079	prpf8	84	96.532	Acanthochromis_polyacanthus
ENSDORG00000006185	Prpf8	96	99.432	ENSAMEG00000007940	PRPF8	84	99.432	Ailuropoda_melanoleuca
ENSDORG00000006185	Prpf8	96	95.930	ENSACIG00000018280	prpf8	84	95.930	Amphilophus_citrinellus
ENSDORG00000006185	Prpf8	96	96.532	ENSAOCG00000010725	prpf8	84	96.532	Amphiprion_ocellaris
ENSDORG00000006185	Prpf8	96	96.532	ENSAPEG00000014397	prpf8	84	96.532	Amphiprion_percula
ENSDORG00000006185	Prpf8	96	96.530	ENSATEG00000010062	prpf8	84	96.530	Anabas_testudineus
ENSDORG00000006185	Prpf8	91	98.790	ENSAPLG00000010357	PRPF8	83	98.790	Anas_platyrhynchos
ENSDORG00000006185	Prpf8	83	98.510	ENSACAG00000014784	PRPF8	85	98.510	Anolis_carolinensis
ENSDORG00000006185	Prpf8	96	99.432	ENSANAG00000032629	PRPF8	84	99.432	Aotus_nancymaae
ENSDORG00000006185	Prpf8	96	95.997	ENSACLG00000020858	prpf8	83	97.384	Astatotilapia_calliptera
ENSDORG00000006185	Prpf8	96	96.454	ENSAMXG00000020291	prpf8	84	96.454	Astyanax_mexicanus
ENSDORG00000006185	Prpf8	96	99.432	ENSBTAG00000011488	PRPF8	84	99.432	Bos_taurus
ENSDORG00000006185	Prpf8	95	85.470	WBGene00004187	prp-8	83	85.613	Caenorhabditis_elegans
ENSDORG00000006185	Prpf8	96	99.432	ENSCJAG00000001911	PRPF8	84	99.432	Callithrix_jacchus
ENSDORG00000006185	Prpf8	96	99.432	ENSCAFG00000019221	PRPF8	84	99.432	Canis_familiaris
ENSDORG00000006185	Prpf8	91	99.392	ENSCAFG00020009943	PRPF8	83	99.392	Canis_lupus_dingo
ENSDORG00000006185	Prpf8	96	99.432	ENSCHIG00000017499	PRPF8	84	99.432	Capra_hircus
ENSDORG00000006185	Prpf8	96	99.432	ENSTSYG00000014120	PRPF8	84	99.432	Carlito_syrichta
ENSDORG00000006185	Prpf8	91	99.393	ENSCAPG00000009459	PRPF8	82	99.393	Cavia_aperea
ENSDORG00000006185	Prpf8	96	99.432	ENSCPOG00000010379	PRPF8	84	99.432	Cavia_porcellus
ENSDORG00000006185	Prpf8	96	99.432	ENSCCAG00000031983	-	84	99.432	Cebus_capucinus
ENSDORG00000006185	Prpf8	96	99.432	ENSCATG00000038595	PRPF8	84	99.432	Cercocebus_atys
ENSDORG00000006185	Prpf8	96	99.432	ENSCLAG00000004388	PRPF8	84	99.432	Chinchilla_lanigera
ENSDORG00000006185	Prpf8	96	99.432	ENSCSAG00000013929	PRPF8	84	99.432	Chlorocebus_sabaeus
ENSDORG00000006185	Prpf8	73	99.738	ENSCHOG00000008590	PRPF8	68	99.738	Choloepus_hoffmanni
ENSDORG00000006185	Prpf8	96	98.793	ENSCPBG00000020409	PRPF8	84	98.793	Chrysemys_picta_bellii
ENSDORG00000006185	Prpf8	94	92.574	ENSCSAVG00000007825	-	81	92.264	Ciona_savignyi
ENSDORG00000006185	Prpf8	96	99.432	ENSCANG00000043088	PRPF8	84	99.432	Colobus_angolensis_palliatus
ENSDORG00000006185	Prpf8	52	99.222	ENSCGRG00001017673	-	98	99.222	Cricetulus_griseus_chok1gshd
ENSDORG00000006185	Prpf8	73	100.000	ENSCGRG00000005129	Prpf8	82	100.000	Cricetulus_griseus_crigri
ENSDORG00000006185	Prpf8	96	96.391	ENSCSEG00000007905	prpf8	84	96.391	Cynoglossus_semilaevis
ENSDORG00000006185	Prpf8	96	96.328	ENSDARG00000026180	prpf8	84	96.328	Danio_rerio
ENSDORG00000006185	Prpf8	88	99.361	ENSDNOG00000018471	PRPF8	82	99.361	Dasypus_novemcinctus
ENSDORG00000006185	Prpf8	95	89.744	FBgn0033688	Prp8	79	89.054	Drosophila_melanogaster
ENSDORG00000006185	Prpf8	96	94.890	ENSETEG00000017592	PRPF8	84	94.890	Echinops_telfairi
ENSDORG00000006185	Prpf8	94	92.375	ENSEBUG00000006548	prpf8	83	91.298	Eptatretus_burgeri
ENSDORG00000006185	Prpf8	96	99.432	ENSEASG00005009514	PRPF8	84	99.432	Equus_asinus_asinus
ENSDORG00000006185	Prpf8	93	99.407	ENSECAG00000021318	PRPF8	83	99.407	Equus_caballus
ENSDORG00000006185	Prpf8	94	96.459	ENSELUG00000007120	prpf8	83	96.459	Esox_lucius
ENSDORG00000006185	Prpf8	96	99.432	ENSFCAG00000006297	PRPF8	84	99.432	Felis_catus
ENSDORG00000006185	Prpf8	96	98.722	ENSFALG00000006628	PRPF8	84	98.722	Ficedula_albicollis
ENSDORG00000006185	Prpf8	96	99.432	ENSFDAG00000004711	PRPF8	84	99.432	Fukomys_damarensis
ENSDORG00000006185	Prpf8	96	96.186	ENSFHEG00000021084	prpf8	84	96.186	Fundulus_heteroclitus
ENSDORG00000006185	Prpf8	96	96.105	ENSGMOG00000002028	prpf8	83	96.105	Gadus_morhua
ENSDORG00000006185	Prpf8	96	98.652	ENSGALG00000002943	PRPF8	84	98.652	Gallus_gallus
ENSDORG00000006185	Prpf8	96	96.249	ENSGAFG00000010337	prpf8	84	96.249	Gambusia_affinis
ENSDORG00000006185	Prpf8	96	96.097	ENSGACG00000008504	prpf8	84	96.097	Gasterosteus_aculeatus
ENSDORG00000006185	Prpf8	96	98.793	ENSGAGG00000008350	PRPF8	84	98.793	Gopherus_agassizii
ENSDORG00000006185	Prpf8	96	99.432	ENSGGOG00000005516	PRPF8	84	99.432	Gorilla_gorilla
ENSDORG00000006185	Prpf8	96	96.244	ENSHBUG00000016192	prpf8	84	96.244	Haplochromis_burtoni
ENSDORG00000006185	Prpf8	96	99.432	ENSHGLG00000012029	PRPF8	84	99.432	Heterocephalus_glaber_female
ENSDORG00000006185	Prpf8	96	99.432	ENSHGLG00100016494	PRPF8	84	99.432	Heterocephalus_glaber_male
ENSDORG00000006185	Prpf8	96	95.695	ENSHCOG00000016414	prpf8	84	96.320	Hippocampus_comes
ENSDORG00000006185	Prpf8	96	96.176	ENSIPUG00000023230	prpf8	84	96.176	Ictalurus_punctatus
ENSDORG00000006185	Prpf8	96	99.432	ENSSTOG00000005128	PRPF8	84	99.432	Ictidomys_tridecemlineatus
ENSDORG00000006185	Prpf8	96	99.432	ENSJJAG00000021159	Prpf8	85	99.432	Jaculus_jaculus
ENSDORG00000006185	Prpf8	95	96.922	ENSKMAG00000016118	prpf8	83	96.922	Kryptolebias_marmoratus
ENSDORG00000006185	Prpf8	96	95.751	ENSLBEG00000026903	prpf8	84	96.178	Labrus_bergylta
ENSDORG00000006185	Prpf8	90	93.683	ENSLACG00000010479	PRPF8	81	97.308	Latimeria_chalumnae
ENSDORG00000006185	Prpf8	96	96.525	ENSLOCG00000005409	prpf8	83	96.525	Lepisosteus_oculatus
ENSDORG00000006185	Prpf8	96	99.432	ENSLAFG00000015445	PRPF8	84	99.432	Loxodonta_africana
ENSDORG00000006185	Prpf8	96	99.432	ENSMFAG00000039995	PRPF8	84	99.432	Macaca_fascicularis
ENSDORG00000006185	Prpf8	96	99.432	ENSMMUG00000004820	PRPF8	84	99.432	Macaca_mulatta
ENSDORG00000006185	Prpf8	96	99.432	ENSMNEG00000035713	PRPF8	84	99.432	Macaca_nemestrina
ENSDORG00000006185	Prpf8	96	99.432	ENSMLEG00000037937	PRPF8	84	99.432	Mandrillus_leucophaeus
ENSDORG00000006185	Prpf8	96	96.530	ENSMAMG00000008919	prpf8	84	96.530	Mastacembelus_armatus
ENSDORG00000006185	Prpf8	96	95.997	ENSMZEG00005015073	prpf8	84	95.997	Maylandia_zebra
ENSDORG00000006185	Prpf8	96	98.652	ENSMGAG00000004769	PRPF8	84	98.652	Meleagris_gallopavo
ENSDORG00000006185	Prpf8	96	99.432	ENSMICG00000010320	PRPF8	99	98.864	Microcebus_murinus
ENSDORG00000006185	Prpf8	96	99.432	ENSMOCG00000016838	Prpf8	84	99.432	Microtus_ochrogaster
ENSDORG00000006185	Prpf8	96	95.751	ENSMMOG00000011887	prpf8	83	95.751	Mola_mola
ENSDORG00000006185	Prpf8	96	99.361	ENSMODG00000010480	PRPF8	84	99.361	Monodelphis_domestica
ENSDORG00000006185	Prpf8	92	93.378	ENSMALG00000003558	prpf8	83	93.546	Monopterus_albus
ENSDORG00000006185	Prpf8	96	99.432	MGP_CAROLIEiJ_G0016740	Prpf8	100	94.219	Mus_caroli
ENSDORG00000006185	Prpf8	96	99.432	ENSMUSG00000020850	Prpf8	100	94.219	Mus_musculus
ENSDORG00000006185	Prpf8	96	99.361	MGP_PahariEiJ_G0017877	Prpf8	100	94.128	Mus_pahari
ENSDORG00000006185	Prpf8	96	99.432	MGP_SPRETEiJ_G0017583	Prpf8	100	94.219	Mus_spretus
ENSDORG00000006185	Prpf8	96	99.432	ENSMPUG00000013227	PRPF8	84	99.432	Mustela_putorius_furo
ENSDORG00000006185	Prpf8	96	99.361	ENSMLUG00000002666	PRPF8	83	99.361	Myotis_lucifugus
ENSDORG00000006185	Prpf8	96	99.432	ENSNGAG00000005305	Prpf8	85	99.432	Nannospalax_galili
ENSDORG00000006185	Prpf8	96	96.067	ENSNBRG00000013127	prpf8	84	96.067	Neolamprologus_brichardi
ENSDORG00000006185	Prpf8	92	96.572	ENSNLEG00000000897	PRPF8	81	96.572	Nomascus_leucogenys
ENSDORG00000006185	Prpf8	94	97.018	ENSMEUG00000015999	PRPF8	83	97.018	Notamacropus_eugenii
ENSDORG00000006185	Prpf8	96	96.948	ENSOPRG00000003102	PRPF8	83	96.948	Ochotona_princeps
ENSDORG00000006185	Prpf8	96	99.432	ENSODEG00000008468	PRPF8	84	99.432	Octodon_degus
ENSDORG00000006185	Prpf8	96	96.070	ENSONIG00000008153	prpf8	84	96.070	Oreochromis_niloticus
ENSDORG00000006185	Prpf8	75	99.320	ENSOANG00000004250	PRPF8	78	99.320	Ornithorhynchus_anatinus
ENSDORG00000006185	Prpf8	96	99.432	ENSOCUG00000000081	PRPF8	84	99.432	Oryctolagus_cuniculus
ENSDORG00000006185	Prpf8	96	96.380	ENSORLG00000008036	prpf8	83	96.380	Oryzias_latipes
ENSDORG00000006185	Prpf8	96	96.380	ENSORLG00020021070	prpf8	83	96.380	Oryzias_latipes_hni
ENSDORG00000006185	Prpf8	96	96.380	ENSORLG00015002340	prpf8	83	96.380	Oryzias_latipes_hsok
ENSDORG00000006185	Prpf8	96	96.591	ENSOMEG00000016866	prpf8	86	96.591	Oryzias_melastigma
ENSDORG00000006185	Prpf8	96	99.221	ENSOARG00000013312	PRPF8	84	99.221	Ovis_aries
ENSDORG00000006185	Prpf8	96	99.432	ENSPPAG00000042753	PRPF8	84	99.432	Pan_paniscus
ENSDORG00000006185	Prpf8	96	99.432	ENSPPRG00000008746	PRPF8	84	99.432	Panthera_pardus
ENSDORG00000006185	Prpf8	96	99.290	ENSPTIG00000019200	PRPF8	84	99.290	Panthera_tigris_altaica
ENSDORG00000006185	Prpf8	96	99.432	ENSPTRG00000039576	PRPF8	84	99.432	Pan_troglodytes
ENSDORG00000006185	Prpf8	96	97.866	ENSPANG00000024607	PRPF8	95	93.003	Papio_anubis
ENSDORG00000006185	Prpf8	96	95.787	ENSPKIG00000011201	prpf8	84	95.787	Paramormyrops_kingsleyae
ENSDORG00000006185	Prpf8	96	98.722	ENSPSIG00000013393	PRPF8	84	98.722	Pelodiscus_sinensis
ENSDORG00000006185	Prpf8	96	99.432	ENSPEMG00000021699	Prpf8	84	99.432	Peromyscus_maniculatus_bairdii
ENSDORG00000006185	Prpf8	90	91.888	ENSPMAG00000005438	prpf8	82	91.964	Petromyzon_marinus
ENSDORG00000006185	Prpf8	96	99.361	ENSPCIG00000022603	PRPF8	84	99.361	Phascolarctos_cinereus
ENSDORG00000006185	Prpf8	96	95.394	ENSPFOG00000007005	prpf8	84	95.394	Poecilia_formosa
ENSDORG00000006185	Prpf8	96	94.322	ENSPLAG00000020777	prpf8	83	94.393	Poecilia_latipinna
ENSDORG00000006185	Prpf8	96	95.394	ENSPMEG00000004051	prpf8	84	95.394	Poecilia_mexicana
ENSDORG00000006185	Prpf8	96	96.522	ENSPREG00000021902	prpf8	84	96.522	Poecilia_reticulata
ENSDORG00000006185	Prpf8	96	99.432	ENSPPYG00000007777	PRPF8	84	99.432	Pongo_abelii
ENSDORG00000006185	Prpf8	86	98.718	ENSPCAG00000008938	PRPF8	73	98.718	Procavia_capensis
ENSDORG00000006185	Prpf8	96	99.432	ENSPCOG00000015182	PRPF8	84	99.432	Propithecus_coquereli
ENSDORG00000006185	Prpf8	87	100.000	ENSPVAG00000002134	PRPF8	77	100.000	Pteropus_vampyrus
ENSDORG00000006185	Prpf8	96	96.244	ENSPNYG00000016356	prpf8	84	96.244	Pundamilia_nyererei
ENSDORG00000006185	Prpf8	96	96.317	ENSPNAG00000009247	prpf8	84	96.317	Pygocentrus_nattereri
ENSDORG00000006185	Prpf8	96	99.432	ENSRNOG00000003495	Prpf8	84	99.432	Rattus_norvegicus
ENSDORG00000006185	Prpf8	96	99.432	ENSRBIG00000031219	PRPF8	84	99.432	Rhinopithecus_bieti
ENSDORG00000006185	Prpf8	96	99.432	ENSRROG00000038014	PRPF8	84	99.432	Rhinopithecus_roxellana
ENSDORG00000006185	Prpf8	94	64.815	YHR165C	PRP8	77	64.815	Saccharomyces_cerevisiae
ENSDORG00000006185	Prpf8	96	99.432	ENSSBOG00000029717	PRPF8	84	99.432	Saimiri_boliviensis_boliviensis
ENSDORG00000006185	Prpf8	96	99.361	ENSSHAG00000006167	PRPF8	84	99.361	Sarcophilus_harrisii
ENSDORG00000006185	Prpf8	96	96.045	ENSSFOG00015013905	prpf8	84	96.045	Scleropages_formosus
ENSDORG00000006185	Prpf8	96	95.901	ENSSMAG00000017736	prpf8	84	95.901	Scophthalmus_maximus
ENSDORG00000006185	Prpf8	96	96.459	ENSSDUG00000003029	prpf8	84	96.459	Seriola_dumerili
ENSDORG00000006185	Prpf8	58	98.946	ENSSLDG00000017096	prpf8	76	98.946	Seriola_lalandi_dorsalis
ENSDORG00000006185	Prpf8	78	100.000	ENSSARG00000002892	PRPF8	65	100.000	Sorex_araneus
ENSDORG00000006185	Prpf8	96	98.581	ENSSPUG00000007463	PRPF8	84	98.581	Sphenodon_punctatus
ENSDORG00000006185	Prpf8	96	95.541	ENSSPAG00000015639	prpf8	84	95.541	Stegastes_partitus
ENSDORG00000006185	Prpf8	96	99.432	ENSSSCG00000017817	PRPF8	84	99.432	Sus_scrofa
ENSDORG00000006185	Prpf8	96	98.722	ENSTGUG00000005648	-	84	98.722	Taeniopygia_guttata
ENSDORG00000006185	Prpf8	55	99.775	ENSTGUG00000015597	-	85	99.775	Taeniopygia_guttata
ENSDORG00000006185	Prpf8	96	96.320	ENSTRUG00000015906	prpf8	84	96.320	Takifugu_rubripes
ENSDORG00000006185	Prpf8	90	98.784	ENSTNIG00000003460	prpf8	82	98.784	Tetraodon_nigroviridis
ENSDORG00000006185	Prpf8	85	99.233	ENSTBEG00000006431	PRPF8	72	99.233	Tupaia_belangeri
ENSDORG00000006185	Prpf8	96	99.290	ENSTTRG00000006869	PRPF8	84	99.290	Tursiops_truncatus
ENSDORG00000006185	Prpf8	64	99.290	ENSUAMG00000015644	-	96	99.290	Ursus_americanus
ENSDORG00000006185	Prpf8	96	99.006	ENSUMAG00000009385	PRPF8	84	99.006	Ursus_maritimus
ENSDORG00000006185	Prpf8	63	100.000	ENSVPAG00000006063	-	54	100.000	Vicugna_pacos
ENSDORG00000006185	Prpf8	96	99.432	ENSVVUG00000021695	PRPF8	83	99.432	Vulpes_vulpes
ENSDORG00000006185	Prpf8	96	97.801	ENSXETG00000022259	prpf8	84	97.801	Xenopus_tropicalis
ENSDORG00000006185	Prpf8	96	96.328	ENSXCOG00000012775	prpf8	84	96.328	Xiphophorus_couchianus
ENSDORG00000006185	Prpf8	96	96.328	ENSXMAG00000008505	prpf8	84	96.328	Xiphophorus_maculatus