EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSDORG00000006199 (Gene tree)
Gene ID
105985853
Gene Symbol
Rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Plus strand
Length
60425 bases
Position
chrKN672377.1:7281202-7341626
Accession
105985853
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000005804tRNA_anti-codonPF01336.254.8e-1211
ENSDORP00000025247tRNA_anti-codonPF01336.255e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000006199-1833-ENSDORP00000005804610 (aa)-UPI000BACFDD3
ENSDORT00000034951-2766XM_013016561ENSDORP00000025247616 (aa)XP_012872015A0A1S3F6Y9
Gene Model
Click here to download ENSDORG00000006199's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006199's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000006199Rpa19962.520ENSAPOG00000011658rpa19963.040Acanthochromis_polyacanthus
ENSDORG00000006199Rpa19760.625ENSAPOG00000019409RPA19760.625Acanthochromis_polyacanthus
ENSDORG00000006199Rpa19988.506ENSAMEG00000007706RPA19888.506Ailuropoda_melanoleuca
ENSDORG00000006199Rpa19757.458ENSACIG00000007277rpa19957.288Amphilophus_citrinellus
ENSDORG00000006199Rpa19758.953ENSACIG00000012881RPA19959.322Amphilophus_citrinellus
ENSDORG00000006199Rpa19954.755ENSAOCG00000009003RPA19955.453Amphiprion_ocellaris
ENSDORG00000006199Rpa19963.458ENSAOCG00000023376rpa19963.621Amphiprion_ocellaris
ENSDORG00000006199Rpa19963.622ENSAPEG00000008634rpa19963.966Amphiprion_percula
ENSDORG00000006199Rpa19953.904ENSAPEG00000019132RPA19954.655Amphiprion_percula
ENSDORG00000006199Rpa19954.671ENSATEG00000006443RPA19954.671Anabas_testudineus
ENSDORG00000006199Rpa19664.676ENSATEG00000022024rpa19964.605Anabas_testudineus
ENSDORG00000006199Rpa19771.756ENSAPLG00000012442RPA19472.030Anas_platyrhynchos
ENSDORG00000006199Rpa19964.136ENSACAG00000014490RPA19965.105Anolis_carolinensis
ENSDORG00000006199Rpa19889.718ENSANAG00000023456RPA110089.718Aotus_nancymaae
ENSDORG00000006199Rpa19563.993ENSACLG00000006640rpa19964.634Astatotilapia_calliptera
ENSDORG00000006199Rpa19958.464ENSACLG00000005223RPA19958.464Astatotilapia_calliptera
ENSDORG00000006199Rpa19962.378ENSAMXG00000008418rpa19962.378Astyanax_mexicanus
ENSDORG00000006199Rpa110088.961ENSBTAG00000009711RPA110088.961Bos_taurus
ENSDORG00000006199Rpa19989.577ENSCJAG00000001848RPA110089.286Callithrix_jacchus
ENSDORG00000006199Rpa110088.961ENSCAFG00000019249RPA110088.961Canis_familiaris
ENSDORG00000006199Rpa110088.961ENSCAFG00020009847RPA110088.961Canis_lupus_dingo
ENSDORG00000006199Rpa110089.123ENSCHIG00000026308RPA110089.123Capra_hircus
ENSDORG00000006199Rpa110089.627ENSTSYG00000003482-10089.627Carlito_syrichta
ENSDORG00000006199Rpa19988.925ENSCPOG00000000035RPA19988.925Cavia_porcellus
ENSDORG00000006199Rpa19979.254ENSCCAG00000010981RPA110078.998Cebus_capucinus
ENSDORG00000006199Rpa19985.016ENSCLAG00000015045-9984.853Chinchilla_lanigera
ENSDORG00000006199Rpa19990.228ENSCLAG00000005185-9990.228Chinchilla_lanigera
ENSDORG00000006199Rpa110078.029ENSCSAG00000013833RPA110078.029Chlorocebus_sabaeus
ENSDORG00000006199Rpa19785.304ENSCHOG00000013540-10086.224Choloepus_hoffmanni
ENSDORG00000006199Rpa17290.433ENSCHOG00000009454-10090.433Choloepus_hoffmanni
ENSDORG00000006199Rpa19977.724ENSCPBG00000020377RPA19978.246Chrysemys_picta_bellii
ENSDORG00000006199Rpa19942.062ENSCING00000023482-9841.899Ciona_intestinalis
ENSDORG00000006199Rpa19885.904ENSCANG00000030911RPA19985.904Colobus_angolensis_palliatus
ENSDORG00000006199Rpa19988.188ENSCGRG00001008197Rpa19988.188Cricetulus_griseus_chok1gshd
ENSDORG00000006199Rpa18387.771ENSCGRG00000000582Rpa19987.771Cricetulus_griseus_crigri
ENSDORG00000006199Rpa19960.948ENSCSEG00000013066rpa19960.784Cynoglossus_semilaevis
ENSDORG00000006199Rpa19951.752ENSCSEG00000012726RPA19853.265Cynoglossus_semilaevis
ENSDORG00000006199Rpa19654.391ENSCVAG00000013446-9654.391Cyprinodon_variegatus
ENSDORG00000006199Rpa19963.725ENSCVAG00000019431rpa19964.789Cyprinodon_variegatus
ENSDORG00000006199Rpa19964.007ENSDARG00000003938rpa19963.844Danio_rerio
ENSDORG00000006199Rpa19989.292ENSDNOG00000017218RPA19989.292Dasypus_novemcinctus
ENSDORG00000006199Rpa19941.977FBgn0010173RpA-709842.439Drosophila_melanogaster
ENSDORG00000006199Rpa18384.694ENSETEG00000017608RPA18384.694Echinops_telfairi
ENSDORG00000006199Rpa19890.698ENSEASG00005009372RPA110088.530Equus_asinus_asinus
ENSDORG00000006199Rpa110091.071ENSECAG00000023886RPA110091.071Equus_caballus
ENSDORG00000006199Rpa16990.714ENSEEUG00000002186-6890.714Erinaceus_europaeus
ENSDORG00000006199Rpa18956.673ENSELUG00000006136RPA19956.722Esox_lucius
ENSDORG00000006199Rpa19962.175ENSELUG00000021071rpa19962.175Esox_lucius
ENSDORG00000006199Rpa110089.141ENSFCAG00000006306RPA19989.141Felis_catus
ENSDORG00000006199Rpa110074.960ENSFALG00000006575RPA19974.960Ficedula_albicollis
ENSDORG00000006199Rpa19990.228ENSFDAG00000007720RPA19990.228Fukomys_damarensis
ENSDORG00000006199Rpa19962.336ENSFHEG00000003580rpa19962.336Fundulus_heteroclitus
ENSDORG00000006199Rpa19959.804ENSGMOG00000010382rpa19959.641Gadus_morhua
ENSDORG00000006199Rpa110074.392ENSGALG00000003072RPA19974.392Gallus_gallus
ENSDORG00000006199Rpa19954.545ENSGAFG00000020953RPA19954.848Gambusia_affinis
ENSDORG00000006199Rpa19963.097ENSGAFG00000012916rpa19962.932Gambusia_affinis
ENSDORG00000006199Rpa19961.526ENSGACG00000010856rpa19961.526Gasterosteus_aculeatus
ENSDORG00000006199Rpa19977.724ENSGAGG00000013611RPA19977.724Gopherus_agassizii
ENSDORG00000006199Rpa110087.175ENSGGOG00000014186RPA110087.175Gorilla_gorilla
ENSDORG00000006199Rpa19754.530ENSHBUG00000009348RPA19954.257Haplochromis_burtoni
ENSDORG00000006199Rpa19963.502ENSHBUG00000017773rpa19963.339Haplochromis_burtoni
ENSDORG00000006199Rpa19990.228ENSHGLG00000008846RPA110090.228Heterocephalus_glaber_female
ENSDORG00000006199Rpa110084.253ENSHGLG00100000799-10084.253Heterocephalus_glaber_male
ENSDORG00000006199Rpa110076.786ENSHGLG00100002005-10076.786Heterocephalus_glaber_male
ENSDORG00000006199Rpa19990.228ENSHGLG00100017755-10090.228Heterocephalus_glaber_male
ENSDORG00000006199Rpa19944.194ENSHCOG00000000351RPA19944.103Hippocampus_comes
ENSDORG00000006199Rpa19960.656ENSHCOG00000001401rpa19960.784Hippocampus_comes
ENSDORG00000006199Rpa19962.927ENSIPUG00000004400rpa19962.927Ictalurus_punctatus
ENSDORG00000006199Rpa19883.059ENSSTOG00000022475RPA19883.059Ictidomys_tridecemlineatus
ENSDORG00000006199Rpa19789.358ENSJJAG00000000876Rpa19989.149Jaculus_jaculus
ENSDORG00000006199Rpa19955.574ENSKMAG00000000234RPA19955.574Kryptolebias_marmoratus
ENSDORG00000006199Rpa19962.969ENSKMAG00000005605rpa19963.132Kryptolebias_marmoratus
ENSDORG00000006199Rpa19962.255ENSLBEG00000021604rpa19962.255Labrus_bergylta
ENSDORG00000006199Rpa19960.833ENSLBEG00000002281RPA18960.833Labrus_bergylta
ENSDORG00000006199Rpa18264.683ENSLACG00000007210RPA19965.400Latimeria_chalumnae
ENSDORG00000006199Rpa19967.264ENSLOCG00000006397rpa19967.264Lepisosteus_oculatus
ENSDORG00000006199Rpa19986.935ENSLAFG00000015354RPA19986.935Loxodonta_africana
ENSDORG00000006199Rpa18289.328ENSMFAG00000036138-10089.328Macaca_fascicularis
ENSDORG00000006199Rpa110082.658ENSMMUG00000002442-10082.658Macaca_mulatta
ENSDORG00000006199Rpa19889.256ENSMMUG00000011604-10089.256Macaca_mulatta
ENSDORG00000006199Rpa110086.201ENSMNEG00000031632-10086.201Macaca_nemestrina
ENSDORG00000006199Rpa19974.838ENSMNEG00000029837-9585.106Macaca_nemestrina
ENSDORG00000006199Rpa19883.168ENSMLEG00000038768-10083.168Mandrillus_leucophaeus
ENSDORG00000006199Rpa19953.264ENSMAMG00000020097RPA19560.833Mastacembelus_armatus
ENSDORG00000006199Rpa19962.418ENSMAMG00000017993rpa19962.586Mastacembelus_armatus
ENSDORG00000006199Rpa19958.464ENSMZEG00005024731RPA19958.464Maylandia_zebra
ENSDORG00000006199Rpa19963.953ENSMZEG00005007551rpa19963.339Maylandia_zebra
ENSDORG00000006199Rpa19974.262ENSMGAG00000005315RPA19874.262Meleagris_gallopavo
ENSDORG00000006199Rpa19789.667ENSMAUG00000010474Rpa19989.667Mesocricetus_auratus
ENSDORG00000006199Rpa110090.260ENSMICG00000012867RPA110090.260Microcebus_murinus
ENSDORG00000006199Rpa19987.928ENSMOCG00000013019Rpa19987.928Microtus_ochrogaster
ENSDORG00000006199Rpa19561.798ENSMMOG00000010868RPA19761.798Mola_mola
ENSDORG00000006199Rpa19961.928ENSMMOG00000014292rpa19963.007Mola_mola
ENSDORG00000006199Rpa19983.550ENSMODG00000010549RPA19983.550Monodelphis_domestica
ENSDORG00000006199Rpa19958.921ENSMALG00000001208RPA18162.785Monopterus_albus
ENSDORG00000006199Rpa19963.711ENSMALG00000011453rpa19963.711Monopterus_albus
ENSDORG00000006199Rpa19987.987MGP_CAROLIEiJ_G0016734Rpa19987.987Mus_caroli
ENSDORG00000006199Rpa19986.013ENSMUSG00000000751Rpa19986.013Mus_musculus
ENSDORG00000006199Rpa19988.691MGP_PahariEiJ_G0017871Rpa19988.691Mus_pahari
ENSDORG00000006199Rpa19986.035MGP_SPRETEiJ_G0017577Rpa19986.035Mus_spretus
ENSDORG00000006199Rpa110087.825ENSMPUG00000013119RPA110087.825Mustela_putorius_furo
ENSDORG00000006199Rpa110085.507ENSMLUG00000006113RPA110085.507Myotis_lucifugus
ENSDORG00000006199Rpa19985.246ENSNGAG00000004522Rpa19785.246Nannospalax_galili
ENSDORG00000006199Rpa19663.790ENSNBRG00000020595rpa19964.421Neolamprologus_brichardi
ENSDORG00000006199Rpa19756.514ENSNBRG00000009672RPA19556.830Neolamprologus_brichardi
ENSDORG00000006199Rpa110089.448ENSNLEG00000017149RPA110089.448Nomascus_leucogenys
ENSDORG00000006199Rpa19872.020ENSMEUG00000006714RPA19972.259Notamacropus_eugenii
ENSDORG00000006199Rpa19986.016ENSODEG00000009038RPA19986.016Octodon_degus
ENSDORG00000006199Rpa19963.651ENSONIG00000013135rpa19963.754Oreochromis_niloticus
ENSDORG00000006199Rpa19883.555ENSOANG00000010880RPA19983.389Ornithorhynchus_anatinus
ENSDORG00000006199Rpa110083.901ENSOCUG00000001504RPA110083.901Oryctolagus_cuniculus
ENSDORG00000006199Rpa19955.199ENSORLG00000003368RPA19955.199Oryzias_latipes
ENSDORG00000006199Rpa19962.418ENSORLG00000004856rpa19962.418Oryzias_latipes
ENSDORG00000006199Rpa19962.582ENSORLG00020008980rpa19962.582Oryzias_latipes_hni
ENSDORG00000006199Rpa19954.054ENSORLG00020015284RPA19954.054Oryzias_latipes_hni
ENSDORG00000006199Rpa17162.069ENSORLG00015005867-9862.069Oryzias_latipes_hsok
ENSDORG00000006199Rpa19955.296ENSORLG00015020383RPA19955.296Oryzias_latipes_hsok
ENSDORG00000006199Rpa19962.582ENSORLG00015013982rpa19962.582Oryzias_latipes_hsok
ENSDORG00000006199Rpa19658.333ENSOMEG00000011040RPA19958.433Oryzias_melastigma
ENSDORG00000006199Rpa19960.685ENSOMEG00000004704rpa19960.522Oryzias_melastigma
ENSDORG00000006199Rpa19488.070ENSOGAG00000029379-10088.070Otolemur_garnettii
ENSDORG00000006199Rpa110089.935ENSOGAG00000005581-10089.935Otolemur_garnettii
ENSDORG00000006199Rpa110089.123ENSOARG00000014479RPA110089.123Ovis_aries
ENSDORG00000006199Rpa110089.448ENSPPAG00000039680RPA110089.448Pan_paniscus
ENSDORG00000006199Rpa110088.493ENSPPRG00000011807RPA19988.493Panthera_pardus
ENSDORG00000006199Rpa110088.331ENSPTIG00000007898RPA19988.331Panthera_tigris_altaica
ENSDORG00000006199Rpa110089.610ENSPTRG00000008539RPA110089.610Pan_troglodytes
ENSDORG00000006199Rpa110089.286ENSPANG00000024592RPA110089.286Papio_anubis
ENSDORG00000006199Rpa19461.750ENSPKIG00000008053rpa19462.093Paramormyrops_kingsleyae
ENSDORG00000006199Rpa19876.639ENSPSIG00000015617RPA19977.333Pelodiscus_sinensis
ENSDORG00000006199Rpa19961.564ENSPMGG00000011589rpa19863.113Periophthalmus_magnuspinnatus
ENSDORG00000006199Rpa19954.693ENSPMGG00000000543RPA19957.394Periophthalmus_magnuspinnatus
ENSDORG00000006199Rpa19988.418ENSPEMG00000021061Rpa19988.418Peromyscus_maniculatus_bairdii
ENSDORG00000006199Rpa19982.439ENSPCIG00000019049RPA19982.334Phascolarctos_cinereus
ENSDORG00000006199Rpa19962.908ENSPFOG00000003987rpa19962.908Poecilia_formosa
ENSDORG00000006199Rpa19962.459ENSPLAG00000004984rpa19962.459Poecilia_latipinna
ENSDORG00000006199Rpa19455.217ENSPLAG00000008844-9754.647Poecilia_latipinna
ENSDORG00000006199Rpa19454.647ENSPMEG00000003627-9754.896Poecilia_mexicana
ENSDORG00000006199Rpa19962.908ENSPMEG00000020602rpa19963.937Poecilia_mexicana
ENSDORG00000006199Rpa19953.323ENSPREG00000010119RPA110052.778Poecilia_reticulata
ENSDORG00000006199Rpa19455.786ENSPREG00000010174rpa19655.786Poecilia_reticulata
ENSDORG00000006199Rpa110090.422ENSPCOG00000001799RPA110090.422Propithecus_coquereli
ENSDORG00000006199Rpa110089.773ENSPVAG00000002149RPA110089.773Pteropus_vampyrus
ENSDORG00000006199Rpa19958.150ENSPNYG00000024165RPA19958.150Pundamilia_nyererei
ENSDORG00000006199Rpa19964.120ENSPNYG00000016316rpa19964.583Pundamilia_nyererei
ENSDORG00000006199Rpa19954.983ENSPNAG00000008599rpa19954.098Pygocentrus_nattereri
ENSDORG00000006199Rpa19988.254ENSRNOG00000003123Rpa19988.254Rattus_norvegicus
ENSDORG00000006199Rpa110089.141ENSRBIG00000036587RPA110089.141Rhinopithecus_bieti
ENSDORG00000006199Rpa110083.468ENSRROG00000043278RPA110083.468Rhinopithecus_roxellana
ENSDORG00000006199Rpa19932.372YAR007CRFA19932.212Saccharomyces_cerevisiae
ENSDORG00000006199Rpa19886.093ENSSBOG00000030233RPA19789.204Saimiri_boliviensis_boliviensis
ENSDORG00000006199Rpa19983.607ENSSHAG00000007969RPA19883.934Sarcophilus_harrisii
ENSDORG00000006199Rpa19964.869ENSSFOG00015005362rpa19264.869Scleropages_formosus
ENSDORG00000006199Rpa19953.111ENSSMAG00000019746RPA19953.021Scophthalmus_maximus
ENSDORG00000006199Rpa19964.321ENSSDUG00000011949rpa19964.157Seriola_dumerili
ENSDORG00000006199Rpa19952.199ENSSDUG00000016358RPA19362.083Seriola_dumerili
ENSDORG00000006199Rpa19951.825ENSSLDG00000020784RPA19262.055Seriola_lalandi_dorsalis
ENSDORG00000006199Rpa19964.321ENSSLDG00000011806rpa19964.157Seriola_lalandi_dorsalis
ENSDORG00000006199Rpa19870.579ENSSARG00000007506RPA110070.579Sorex_araneus
ENSDORG00000006199Rpa19772.605ENSSPUG00000007223RPA19972.605Sphenodon_punctatus
ENSDORG00000006199Rpa19658.305ENSSPAG00000011165RPA19758.362Stegastes_partitus
ENSDORG00000006199Rpa19962.684ENSSPAG00000009903rpa19962.520Stegastes_partitus
ENSDORG00000006199Rpa19888.723ENSSSCG00000017822RPA110088.723Sus_scrofa
ENSDORG00000006199Rpa110074.716ENSTGUG00000005775RPA19974.716Taeniopygia_guttata
ENSDORG00000006199Rpa19964.039ENSTRUG00000003616rpa19963.875Takifugu_rubripes
ENSDORG00000006199Rpa19959.146ENSTRUG00000000405RPA19458.669Takifugu_rubripes
ENSDORG00000006199Rpa19963.695ENSTNIG00000016199rpa19963.961Tetraodon_nigroviridis
ENSDORG00000006199Rpa18795.349ENSTBEG00000002709RPA18995.349Tupaia_belangeri
ENSDORG00000006199Rpa19988.599ENSTTRG00000001169RPA19988.599Tursiops_truncatus
ENSDORG00000006199Rpa18992.308ENSUAMG00000015676RPA19792.308Ursus_americanus
ENSDORG00000006199Rpa110088.961ENSUMAG00000009328RPA110088.961Ursus_maritimus
ENSDORG00000006199Rpa110086.526ENSVPAG00000009443RPA110086.526Vicugna_pacos
ENSDORG00000006199Rpa110088.799ENSVVUG00000021715RPA110088.799Vulpes_vulpes
ENSDORG00000006199Rpa19974.754ENSXETG00000013538rpa19975.123Xenopus_tropicalis
ENSDORG00000006199Rpa19756.876ENSXCOG00000009899-9957.094Xiphophorus_couchianus
ENSDORG00000006199Rpa19361.217ENSXCOG00000010068rpa19462.410Xiphophorus_couchianus
ENSDORG00000006199Rpa19961.765ENSXMAG00000004102rpa19963.445Xiphophorus_maculatus
ENSDORG00000006199Rpa19761.667ENSXMAG00000010333RPA19361.667Xiphophorus_maculatus

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