EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000006349 (Gene tree)
Gene ID: -
Gene Symbol: Trnau1ap
Alias: 1110007F05Rik|SECp43|Trspap1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 38194 bases
Position: chrKN672352.1:10317529-10355722
Accession: 105997669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000026625	RRM_1	PF00076.22	8.9e-28	1	2
ENSDORP00000026625	RRM_1	PF00076.22	8.9e-28	2	2
ENSDORP00000005943	RRM_1	PF00076.22	1.3e-26	1	2
ENSDORP00000005943	RRM_1	PF00076.22	1.3e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000006348	-	816	-	ENSDORP00000005943	271 (aa)	-	UPI000BAD1876
ENSDORT00000024644	-	1765	XM_013032171	ENSDORP00000026625	231 (aa)	XP_012887625	UPI000BAD1EEF

Gene Model

Click here to download ENSDORG00000006349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000006349	Trnau1ap	74	34.586	ENSDORG00000010683	Tial1	69	30.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006349	Trnau1ap	100	100.000	ENSG00000180098	TRNAU1AP	99	91.608	Homo_sapiens
ENSDORG00000006349	Trnau1ap	97	60.504	ENSAPOG00000007148	TRNAU1AP	98	56.291	Acanthochromis_polyacanthus
ENSDORG00000006349	Trnau1ap	100	98.701	ENSAMEG00000011367	TRNAU1AP	99	90.909	Ailuropoda_melanoleuca
ENSDORG00000006349	Trnau1ap	94	70.115	ENSACIG00000004161	trnau1apa	98	55.743	Amphilophus_citrinellus
ENSDORG00000006349	Trnau1ap	97	61.017	ENSAOCG00000008056	trnau1apa	97	56.856	Amphiprion_ocellaris
ENSDORG00000006349	Trnau1ap	97	61.111	ENSAPEG00000008868	trnau1apa	98	58.966	Amphiprion_percula
ENSDORG00000006349	Trnau1ap	97	60.324	ENSATEG00000012140	trnau1apa	98	53.871	Anabas_testudineus
ENSDORG00000006349	Trnau1ap	98	94.690	ENSAPLG00000002606	TRNAU1AP	97	89.139	Anas_platyrhynchos
ENSDORG00000006349	Trnau1ap	65	50.521	ENSACAG00000004205	-	73	50.521	Anolis_carolinensis
ENSDORG00000006349	Trnau1ap	99	74.459	ENSACAG00000003995	-	97	71.583	Anolis_carolinensis
ENSDORG00000006349	Trnau1ap	100	100.000	ENSANAG00000018976	TRNAU1AP	99	91.608	Aotus_nancymaae
ENSDORG00000006349	Trnau1ap	97	60.338	ENSACLG00000018515	trnau1apa	98	56.902	Astatotilapia_calliptera
ENSDORG00000006349	Trnau1ap	94	65.556	ENSAMXG00000029240	-	95	63.636	Astyanax_mexicanus
ENSDORG00000006349	Trnau1ap	92	59.633	ENSAMXG00000013750	trnau1apa	90	54.015	Astyanax_mexicanus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSBTAG00000010393	TRNAU1AP	99	91.259	Bos_taurus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCJAG00000009717	TRNAU1AP	99	91.608	Callithrix_jacchus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCAFG00000011735	TRNAU1AP	99	91.259	Canis_familiaris
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCAFG00020023584	TRNAU1AP	99	91.259	Canis_lupus_dingo
ENSDORG00000006349	Trnau1ap	100	99.567	ENSCHIG00000023215	TRNAU1AP	99	91.259	Capra_hircus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSTSYG00000003506	TRNAU1AP	99	92.226	Carlito_syrichta
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCPOG00000001925	TRNAU1AP	99	90.909	Cavia_porcellus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCCAG00000037506	TRNAU1AP	99	91.608	Cebus_capucinus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSCATG00000044617	TRNAU1AP	99	91.259	Cercocebus_atys
ENSDORG00000006349	Trnau1ap	100	99.567	ENSCLAG00000008223	TRNAU1AP	99	90.559	Chinchilla_lanigera
ENSDORG00000006349	Trnau1ap	100	99.567	ENSCSAG00000001014	TRNAU1AP	99	91.259	Chlorocebus_sabaeus
ENSDORG00000006349	Trnau1ap	94	95.413	ENSCPBG00000000121	TRNAU1AP	100	89.416	Chrysemys_picta_bellii
ENSDORG00000006349	Trnau1ap	74	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSDORG00000006349	Trnau1ap	100	85.281	ENSCANG00000041949	TRNAU1AP	100	89.831	Colobus_angolensis_palliatus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCGRG00001004713	Trnau1ap	99	91.608	Cricetulus_griseus_chok1gshd
ENSDORG00000006349	Trnau1ap	100	100.000	ENSCGRG00000014532	Trnau1ap	99	91.608	Cricetulus_griseus_crigri
ENSDORG00000006349	Trnau1ap	97	54.882	ENSCSEG00000006663	trnau1apa	95	54.362	Cynoglossus_semilaevis
ENSDORG00000006349	Trnau1ap	98	61.570	ENSCVAG00000018069	trnau1apa	94	58.209	Cyprinodon_variegatus
ENSDORG00000006349	Trnau1ap	95	49.281	ENSDARG00000101323	trnau1apa	88	49.110	Danio_rerio
ENSDORG00000006349	Trnau1ap	100	100.000	ENSDNOG00000033009	TRNAU1AP	99	91.608	Dasypus_novemcinctus
ENSDORG00000006349	Trnau1ap	83	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSDORG00000006349	Trnau1ap	94	44.000	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSDORG00000006349	Trnau1ap	82	100.000	ENSETEG00000012594	TRNAU1AP	100	92.245	Echinops_telfairi
ENSDORG00000006349	Trnau1ap	68	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSDORG00000006349	Trnau1ap	56	52.667	ENSEBUG00000004709	-	79	52.667	Eptatretus_burgeri
ENSDORG00000006349	Trnau1ap	100	100.000	ENSEASG00005010062	TRNAU1AP	93	100.000	Equus_asinus_asinus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSECAG00000012980	TRNAU1AP	93	100.000	Equus_caballus
ENSDORG00000006349	Trnau1ap	97	70.526	ENSELUG00000022790	-	94	50.370	Esox_lucius
ENSDORG00000006349	Trnau1ap	96	58.596	ENSELUG00000017686	trnau1apa	94	59.783	Esox_lucius
ENSDORG00000006349	Trnau1ap	100	100.000	ENSFCAG00000013401	TRNAU1AP	99	91.608	Felis_catus
ENSDORG00000006349	Trnau1ap	94	95.413	ENSFALG00000001371	TRNAU1AP	100	89.051	Ficedula_albicollis
ENSDORG00000006349	Trnau1ap	100	99.567	ENSFDAG00000018599	TRNAU1AP	99	90.909	Fukomys_damarensis
ENSDORG00000006349	Trnau1ap	98	60.816	ENSFHEG00000018232	trnau1apa	85	56.800	Fundulus_heteroclitus
ENSDORG00000006349	Trnau1ap	91	54.338	ENSGMOG00000016508	trnau1apa	92	51.957	Gadus_morhua
ENSDORG00000006349	Trnau1ap	100	94.372	ENSGALG00000001310	-	99	86.014	Gallus_gallus
ENSDORG00000006349	Trnau1ap	66	46.479	ENSGALG00000012721	C2H6orf52	95	42.471	Gallus_gallus
ENSDORG00000006349	Trnau1ap	97	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSDORG00000006349	Trnau1ap	97	61.017	ENSGACG00000001443	trnau1apa	95	56.357	Gasterosteus_aculeatus
ENSDORG00000006349	Trnau1ap	94	95.872	ENSGAGG00000004940	TRNAU1AP	100	89.781	Gopherus_agassizii
ENSDORG00000006349	Trnau1ap	100	100.000	ENSGGOG00000003511	TRNAU1AP	99	91.608	Gorilla_gorilla
ENSDORG00000006349	Trnau1ap	97	71.852	ENSHBUG00000002510	trnau1apa	98	55.960	Haplochromis_burtoni
ENSDORG00000006349	Trnau1ap	100	99.134	ENSHGLG00000010380	TRNAU1AP	99	90.559	Heterocephalus_glaber_female
ENSDORG00000006349	Trnau1ap	100	96.104	ENSHGLG00100012699	TRNAU1AP	95	92.251	Heterocephalus_glaber_male
ENSDORG00000006349	Trnau1ap	97	60.494	ENSHCOG00000014770	trnau1apa	97	52.443	Hippocampus_comes
ENSDORG00000006349	Trnau1ap	100	100.000	ENSSTOG00000000079	TRNAU1AP	99	91.608	Ictidomys_tridecemlineatus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSJJAG00000010128	Trnau1ap	99	91.259	Jaculus_jaculus
ENSDORG00000006349	Trnau1ap	97	62.343	ENSKMAG00000001230	trnau1apa	93	57.292	Kryptolebias_marmoratus
ENSDORG00000006349	Trnau1ap	97	60.996	ENSLBEG00000011683	trnau1apa	93	56.849	Labrus_bergylta
ENSDORG00000006349	Trnau1ap	99	72.052	ENSLACG00000005541	TRNAU1AP	99	67.368	Latimeria_chalumnae
ENSDORG00000006349	Trnau1ap	99	71.121	ENSLOCG00000004041	trnau1apa	98	66.078	Lepisosteus_oculatus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSLAFG00000007628	TRNAU1AP	99	91.259	Loxodonta_africana
ENSDORG00000006349	Trnau1ap	100	99.567	ENSMFAG00000043751	TRNAU1AP	99	91.259	Macaca_fascicularis
ENSDORG00000006349	Trnau1ap	100	99.567	ENSMMUG00000006561	TRNAU1AP	99	91.259	Macaca_mulatta
ENSDORG00000006349	Trnau1ap	100	99.567	ENSMNEG00000044201	TRNAU1AP	99	91.259	Macaca_nemestrina
ENSDORG00000006349	Trnau1ap	100	99.567	ENSMLEG00000015649	TRNAU1AP	99	92.171	Mandrillus_leucophaeus
ENSDORG00000006349	Trnau1ap	97	62.500	ENSMAMG00000001247	trnau1apa	97	61.172	Mastacembelus_armatus
ENSDORG00000006349	Trnau1ap	97	60.338	ENSMZEG00005017722	trnau1apa	98	56.902	Maylandia_zebra
ENSDORG00000006349	Trnau1ap	96	94.144	ENSMGAG00000002105	TRNAU1AP	100	87.770	Meleagris_gallopavo
ENSDORG00000006349	Trnau1ap	100	100.000	ENSMICG00000008386	TRNAU1AP	99	91.608	Microcebus_murinus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSMOCG00000011189	Trnau1ap	99	91.608	Microtus_ochrogaster
ENSDORG00000006349	Trnau1ap	97	59.556	ENSMMOG00000012107	trnau1apa	94	56.618	Mola_mola
ENSDORG00000006349	Trnau1ap	100	96.537	ENSMODG00000010927	TRNAU1AP	99	87.413	Monodelphis_domestica
ENSDORG00000006349	Trnau1ap	97	60.744	ENSMALG00000016778	trnau1apa	92	56.877	Monopterus_albus
ENSDORG00000006349	Trnau1ap	100	99.134	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSDORG00000006349	Trnau1ap	100	99.134	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSDORG00000006349	Trnau1ap	100	99.567	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSDORG00000006349	Trnau1ap	100	99.134	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSMPUG00000015511	TRNAU1AP	99	91.259	Mustela_putorius_furo
ENSDORG00000006349	Trnau1ap	100	100.000	ENSMLUG00000012586	TRNAU1AP	99	91.608	Myotis_lucifugus
ENSDORG00000006349	Trnau1ap	100	98.268	ENSNGAG00000015881	Trnau1ap	99	90.210	Nannospalax_galili
ENSDORG00000006349	Trnau1ap	98	60.793	ENSNBRG00000001758	trnau1apa	97	57.093	Neolamprologus_brichardi
ENSDORG00000006349	Trnau1ap	100	100.000	ENSNLEG00000009822	TRNAU1AP	99	92.527	Nomascus_leucogenys
ENSDORG00000006349	Trnau1ap	96	95.495	ENSMEUG00000006117	TRNAU1AP	100	88.129	Notamacropus_eugenii
ENSDORG00000006349	Trnau1ap	63	100.000	ENSOPRG00000007084	-	69	82.727	Ochotona_princeps
ENSDORG00000006349	Trnau1ap	100	100.000	ENSODEG00000002970	TRNAU1AP	99	90.909	Octodon_degus
ENSDORG00000006349	Trnau1ap	94	60.169	ENSONIG00000004715	trnau1apa	97	58.704	Oreochromis_niloticus
ENSDORG00000006349	Trnau1ap	99	73.043	ENSOANG00000005325	-	99	68.531	Ornithorhynchus_anatinus
ENSDORG00000006349	Trnau1ap	100	77.922	ENSOCUG00000006834	-	99	68.504	Oryctolagus_cuniculus
ENSDORG00000006349	Trnau1ap	99	73.043	ENSOCUG00000002353	-	99	71.127	Oryctolagus_cuniculus
ENSDORG00000006349	Trnau1ap	100	97.403	ENSOCUG00000011704	-	99	89.510	Oryctolagus_cuniculus
ENSDORG00000006349	Trnau1ap	99	64.069	ENSORLG00000010428	trnau1apa	94	58.242	Oryzias_latipes
ENSDORG00000006349	Trnau1ap	97	62.712	ENSORLG00020000926	trnau1ap	95	53.448	Oryzias_latipes_hni
ENSDORG00000006349	Trnau1ap	97	62.712	ENSORLG00015009858	trnau1ap	95	53.448	Oryzias_latipes_hsok
ENSDORG00000006349	Trnau1ap	97	62.712	ENSOMEG00000007873	trnau1apa	95	53.793	Oryzias_melastigma
ENSDORG00000006349	Trnau1ap	100	100.000	ENSOGAG00000002274	TRNAU1AP	99	91.608	Otolemur_garnettii
ENSDORG00000006349	Trnau1ap	100	99.567	ENSOARG00000002843	TRNAU1AP	99	91.259	Ovis_aries
ENSDORG00000006349	Trnau1ap	100	100.000	ENSPPAG00000033927	TRNAU1AP	99	91.608	Pan_paniscus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSPPRG00000004416	TRNAU1AP	99	91.608	Panthera_pardus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSPTIG00000016677	TRNAU1AP	99	91.608	Panthera_tigris_altaica
ENSDORG00000006349	Trnau1ap	93	79.926	ENSPTRG00000000434	-	97	77.695	Pan_troglodytes
ENSDORG00000006349	Trnau1ap	100	99.567	ENSPANG00000016019	TRNAU1AP	99	91.259	Papio_anubis
ENSDORG00000006349	Trnau1ap	96	76.667	ENSPKIG00000022205	-	92	72.826	Paramormyrops_kingsleyae
ENSDORG00000006349	Trnau1ap	99	57.917	ENSPKIG00000015511	trnau1apa	92	54.255	Paramormyrops_kingsleyae
ENSDORG00000006349	Trnau1ap	94	96.330	ENSPSIG00000006864	TRNAU1AP	100	89.781	Pelodiscus_sinensis
ENSDORG00000006349	Trnau1ap	97	63.274	ENSPMGG00000023893	trnau1apa	91	60.000	Periophthalmus_magnuspinnatus
ENSDORG00000006349	Trnau1ap	100	99.567	ENSPEMG00000007877	Trnau1ap	99	91.259	Peromyscus_maniculatus_bairdii
ENSDORG00000006349	Trnau1ap	97	60.987	ENSPMAG00000005934	trnau1apa	98	60.000	Petromyzon_marinus
ENSDORG00000006349	Trnau1ap	75	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSDORG00000006349	Trnau1ap	97	58.403	ENSPFOG00000008100	trnau1apa	93	54.545	Poecilia_formosa
ENSDORG00000006349	Trnau1ap	93	58.150	ENSPLAG00000010236	trnau1apa	93	54.874	Poecilia_latipinna
ENSDORG00000006349	Trnau1ap	94	61.468	ENSPMEG00000016387	trnau1apa	89	57.303	Poecilia_mexicana
ENSDORG00000006349	Trnau1ap	93	57.371	ENSPREG00000019821	trnau1apa	84	65.476	Poecilia_reticulata
ENSDORG00000006349	Trnau1ap	100	73.160	ENSPPYG00000001639	-	100	79.845	Pongo_abelii
ENSDORG00000006349	Trnau1ap	97	79.556	ENSPCOG00000023470	-	99	76.619	Propithecus_coquereli
ENSDORG00000006349	Trnau1ap	100	100.000	ENSPCOG00000027712	-	99	91.608	Propithecus_coquereli
ENSDORG00000006349	Trnau1ap	100	100.000	ENSPVAG00000017214	TRNAU1AP	99	91.608	Pteropus_vampyrus
ENSDORG00000006349	Trnau1ap	97	65.185	ENSPNYG00000010130	trnau1apa	97	63.433	Pundamilia_nyererei
ENSDORG00000006349	Trnau1ap	99	54.583	ENSPNAG00000024905	trnau1apa	95	50.680	Pygocentrus_nattereri
ENSDORG00000006349	Trnau1ap	100	99.567	ENSRNOG00000055344	Trnau1ap	79	99.567	Rattus_norvegicus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSRBIG00000029083	TRNAU1AP	99	91.608	Rhinopithecus_bieti
ENSDORG00000006349	Trnau1ap	100	100.000	ENSRROG00000029128	TRNAU1AP	99	91.608	Rhinopithecus_roxellana
ENSDORG00000006349	Trnau1ap	100	100.000	ENSSBOG00000021299	TRNAU1AP	99	91.608	Saimiri_boliviensis_boliviensis
ENSDORG00000006349	Trnau1ap	100	96.537	ENSSHAG00000008108	TRNAU1AP	99	86.713	Sarcophilus_harrisii
ENSDORG00000006349	Trnau1ap	98	51.316	ENSSMAG00000020851	trnau1apa	98	53.618	Scophthalmus_maximus
ENSDORG00000006349	Trnau1ap	97	59.091	ENSSDUG00000011734	trnau1apa	94	54.608	Seriola_dumerili
ENSDORG00000006349	Trnau1ap	96	50.965	ENSSLDG00000012101	trnau1apa	92	50.368	Seriola_lalandi_dorsalis
ENSDORG00000006349	Trnau1ap	96	98.649	ENSSARG00000007536	TRNAU1AP	100	92.086	Sorex_araneus
ENSDORG00000006349	Trnau1ap	52	82.645	ENSSPUG00000010415	-	100	74.432	Sphenodon_punctatus
ENSDORG00000006349	Trnau1ap	100	87.446	ENSSPUG00000010400	-	99	79.298	Sphenodon_punctatus
ENSDORG00000006349	Trnau1ap	97	60.417	ENSSPAG00000005029	trnau1apa	98	55.921	Stegastes_partitus
ENSDORG00000006349	Trnau1ap	100	100.000	ENSSSCG00000030284	TRNAU1AP	99	91.608	Sus_scrofa
ENSDORG00000006349	Trnau1ap	66	50.510	ENSTGUG00000005908	-	100	50.510	Taeniopygia_guttata
ENSDORG00000006349	Trnau1ap	96	95.495	ENSTGUG00000000735	-	100	89.209	Taeniopygia_guttata
ENSDORG00000006349	Trnau1ap	97	62.025	ENSTRUG00000003352	trnau1apa	97	55.892	Takifugu_rubripes
ENSDORG00000006349	Trnau1ap	97	59.244	ENSTNIG00000006129	trnau1apa	97	54.849	Tetraodon_nigroviridis
ENSDORG00000006349	Trnau1ap	82	86.243	ENSTBEG00000008049	-	100	80.816	Tupaia_belangeri
ENSDORG00000006349	Trnau1ap	100	100.000	ENSTTRG00000001854	TRNAU1AP	99	91.608	Tursiops_truncatus
ENSDORG00000006349	Trnau1ap	94	99.541	ENSUAMG00000008789	TRNAU1AP	100	93.066	Ursus_americanus
ENSDORG00000006349	Trnau1ap	100	99.134	ENSUMAG00000011068	TRNAU1AP	99	90.909	Ursus_maritimus
ENSDORG00000006349	Trnau1ap	100	86.441	ENSVPAG00000006778	TRNAU1AP	99	81.379	Vicugna_pacos
ENSDORG00000006349	Trnau1ap	100	100.000	ENSVVUG00000012518	TRNAU1AP	93	92.254	Vulpes_vulpes
ENSDORG00000006349	Trnau1ap	97	58.403	ENSXMAG00000017361	trnau1apa	93	54.895	Xiphophorus_maculatus