EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006391 (Gene tree)
Gene ID: 105993659
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 86978 bases
Position: chrKN672444.1:1942706-2029683
Accession: 105993659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000005983	RRM_1	PF00076.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000006391	-	4371	XM_013026989	ENSDORP00000005983	1266 (aa)	XP_012882443	UPI000BAD124C

Gene Model

Click here to download ENSDORG00000006391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006391	Scaf8	100	93.454	ENSG00000213079	SCAF8	99	93.454	Homo_sapiens
ENSDORG00000006391	Scaf8	92	68.924	ENSAPOG00000015527	SCAF8	76	68.803	Acanthochromis_polyacanthus
ENSDORG00000006391	Scaf8	99	92.722	ENSAMEG00000007583	SCAF8	95	92.642	Ailuropoda_melanoleuca
ENSDORG00000006391	Scaf8	92	68.803	ENSAOCG00000002421	SCAF8	76	68.682	Amphiprion_ocellaris
ENSDORG00000006391	Scaf8	89	65.576	ENSATEG00000006959	SCAF8	96	65.170	Anabas_testudineus
ENSDORG00000006391	Scaf8	99	77.543	ENSAPLG00000005765	SCAF8	99	77.543	Anas_platyrhynchos
ENSDORG00000006391	Scaf8	99	73.569	ENSACAG00000005282	SCAF8	99	73.490	Anolis_carolinensis
ENSDORG00000006391	Scaf8	100	93.060	ENSANAG00000036184	SCAF8	99	93.196	Aotus_nancymaae
ENSDORG00000006391	Scaf8	87	68.485	ENSACLG00000018828	SCAF8	79	68.242	Astatotilapia_calliptera
ENSDORG00000006391	Scaf8	100	92.192	ENSBTAG00000031917	SCAF8	99	92.326	Bos_taurus
ENSDORG00000006391	Scaf8	100	93.139	ENSCJAG00000012631	SCAF8	94	93.275	Callithrix_jacchus
ENSDORG00000006391	Scaf8	99	92.885	ENSCAFG00000000570	SCAF8	99	92.806	Canis_familiaris
ENSDORG00000006391	Scaf8	99	92.885	ENSCAFG00020015048	SCAF8	98	92.806	Canis_lupus_dingo
ENSDORG00000006391	Scaf8	100	91.719	ENSCHIG00000025041	SCAF8	99	91.851	Capra_hircus
ENSDORG00000006391	Scaf8	99	93.592	ENSTSYG00000010991	SCAF8	97	93.513	Carlito_syrichta
ENSDORG00000006391	Scaf8	82	98.893	ENSCAPG00000003300	SCAF8	94	98.876	Cavia_aperea
ENSDORG00000006391	Scaf8	99	85.478	ENSCPOG00000022216	-	99	84.846	Cavia_porcellus
ENSDORG00000006391	Scaf8	100	92.587	ENSCCAG00000024952	SCAF8	99	92.744	Cebus_capucinus
ENSDORG00000006391	Scaf8	100	93.612	ENSCATG00000035361	SCAF8	99	93.829	Cercocebus_atys
ENSDORG00000006391	Scaf8	99	92.642	ENSCLAG00000004910	SCAF8	100	92.563	Chinchilla_lanigera
ENSDORG00000006391	Scaf8	99	93.829	ENSCSAG00000013430	SCAF8	98	93.829	Chlorocebus_sabaeus
ENSDORG00000006391	Scaf8	100	73.577	ENSCPBG00000016330	SCAF8	99	72.206	Chrysemys_picta_bellii
ENSDORG00000006391	Scaf8	100	93.454	ENSCANG00000039499	SCAF8	99	93.671	Colobus_angolensis_palliatus
ENSDORG00000006391	Scaf8	100	91.325	ENSCGRG00001020167	Scaf8	99	91.311	Cricetulus_griseus_chok1gshd
ENSDORG00000006391	Scaf8	100	91.404	ENSCGRG00000004120	Scaf8	99	91.311	Cricetulus_griseus_crigri
ENSDORG00000006391	Scaf8	88	65.614	ENSCSEG00000000043	-	77	67.072	Cynoglossus_semilaevis
ENSDORG00000006391	Scaf8	83	67.454	ENSCVAG00000000925	SCAF8	77	67.060	Cyprinodon_variegatus
ENSDORG00000006391	Scaf8	96	87.152	ENSDNOG00000025271	SCAF8	100	90.507	Dasypus_novemcinctus
ENSDORG00000006391	Scaf8	100	92.435	ENSEASG00005018879	SCAF8	99	92.356	Equus_asinus_asinus
ENSDORG00000006391	Scaf8	100	92.587	ENSECAG00000005540	SCAF8	99	92.508	Equus_caballus
ENSDORG00000006391	Scaf8	87	65.749	ENSELUG00000002779	SCAF8	75	65.389	Esox_lucius
ENSDORG00000006391	Scaf8	100	92.981	ENSFCAG00000023424	SCAF8	99	93.117	Felis_catus
ENSDORG00000006391	Scaf8	100	77.205	ENSFALG00000012433	SCAF8	99	77.535	Ficedula_albicollis
ENSDORG00000006391	Scaf8	99	93.038	ENSFDAG00000010335	SCAF8	99	92.959	Fukomys_damarensis
ENSDORG00000006391	Scaf8	91	68.454	ENSFHEG00000008284	SCAF8	77	68.454	Fundulus_heteroclitus
ENSDORG00000006391	Scaf8	65	63.038	ENSGMOG00000018812	SCAF8	77	60.916	Gadus_morhua
ENSDORG00000006391	Scaf8	99	78.091	ENSGALG00000013635	SCAF8	98	77.700	Gallus_gallus
ENSDORG00000006391	Scaf8	86	68.447	ENSGAFG00000018033	SCAF8	77	65.551	Gambusia_affinis
ENSDORG00000006391	Scaf8	93	53.465	ENSGACG00000006909	SCAF8	94	70.375	Gasterosteus_aculeatus
ENSDORG00000006391	Scaf8	63	70.920	ENSGAGG00000017820	-	88	70.675	Gopherus_agassizii
ENSDORG00000006391	Scaf8	100	93.454	ENSGGOG00000008645	SCAF8	99	93.671	Gorilla_gorilla
ENSDORG00000006391	Scaf8	87	68.364	ENSHBUG00000019537	SCAF8	79	68.121	Haplochromis_burtoni
ENSDORG00000006391	Scaf8	100	92.744	ENSHGLG00000003619	SCAF8	99	92.880	Heterocephalus_glaber_female
ENSDORG00000006391	Scaf8	99	92.959	ENSHGLG00100004708	SCAF8	100	92.880	Heterocephalus_glaber_male
ENSDORG00000006391	Scaf8	99	94.225	ENSSTOG00000026043	SCAF8	99	94.146	Ictidomys_tridecemlineatus
ENSDORG00000006391	Scaf8	99	92.101	ENSJJAG00000020480	Scaf8	99	91.943	Jaculus_jaculus
ENSDORG00000006391	Scaf8	88	68.325	ENSKMAG00000012767	SCAF8	78	68.204	Kryptolebias_marmoratus
ENSDORG00000006391	Scaf8	62	75.185	ENSLBEG00000012484	-	60	74.740	Labrus_bergylta
ENSDORG00000006391	Scaf8	87	74.940	ENSLACG00000001394	SCAF8	99	73.150	Latimeria_chalumnae
ENSDORG00000006391	Scaf8	100	61.285	ENSLOCG00000016856	SCAF8	99	60.345	Lepisosteus_oculatus
ENSDORG00000006391	Scaf8	100	90.472	ENSLAFG00000000022	SCAF8	99	90.945	Loxodonta_africana
ENSDORG00000006391	Scaf8	100	93.612	ENSMFAG00000032738	SCAF8	99	93.612	Macaca_fascicularis
ENSDORG00000006391	Scaf8	100	93.612	ENSMMUG00000015163	SCAF8	99	93.612	Macaca_mulatta
ENSDORG00000006391	Scaf8	100	93.691	ENSMNEG00000043466	SCAF8	99	93.829	Macaca_nemestrina
ENSDORG00000006391	Scaf8	99	93.829	ENSMLEG00000034845	SCAF8	99	93.829	Mandrillus_leucophaeus
ENSDORG00000006391	Scaf8	84	65.605	ENSMAMG00000009457	SCAF8	76	65.096	Mastacembelus_armatus
ENSDORG00000006391	Scaf8	87	68.364	ENSMZEG00005005698	SCAF8	79	68.121	Maylandia_zebra
ENSDORG00000006391	Scaf8	99	78.176	ENSMGAG00000012762	SCAF8	99	77.942	Meleagris_gallopavo
ENSDORG00000006391	Scaf8	99	90.981	ENSMAUG00000009513	Scaf8	100	90.902	Mesocricetus_auratus
ENSDORG00000006391	Scaf8	100	93.297	ENSMICG00000028965	SCAF8	100	92.120	Microcebus_murinus
ENSDORG00000006391	Scaf8	100	91.562	ENSMOCG00000014950	Scaf8	99	91.693	Microtus_ochrogaster
ENSDORG00000006391	Scaf8	86	62.995	ENSMMOG00000002216	SCAF8	78	63.288	Mola_mola
ENSDORG00000006391	Scaf8	99	84.913	ENSMODG00000008301	SCAF8	99	84.834	Monodelphis_domestica
ENSDORG00000006391	Scaf8	88	67.874	ENSMALG00000011584	SCAF8	78	68.034	Monopterus_albus
ENSDORG00000006391	Scaf8	100	90.300	MGP_CAROLIEiJ_G0021016	Scaf8	99	90.221	Mus_caroli
ENSDORG00000006391	Scaf8	100	90.536	ENSMUSG00000046201	Scaf8	99	90.457	Mus_musculus
ENSDORG00000006391	Scaf8	100	91.009	MGP_PahariEiJ_G0023334	Scaf8	99	90.931	Mus_pahari
ENSDORG00000006391	Scaf8	99	92.168	ENSMPUG00000001974	SCAF8	98	92.089	Mustela_putorius_furo
ENSDORG00000006391	Scaf8	99	91.621	ENSMLUG00000029190	SCAF8	99	91.542	Myotis_lucifugus
ENSDORG00000006391	Scaf8	100	92.271	ENSNGAG00000012332	Scaf8	99	92.192	Nannospalax_galili
ENSDORG00000006391	Scaf8	100	52.087	ENSNBRG00000009067	SCAF8	99	52.019	Neolamprologus_brichardi
ENSDORG00000006391	Scaf8	100	92.211	ENSNLEG00000015509	SCAF8	99	92.277	Nomascus_leucogenys
ENSDORG00000006391	Scaf8	70	91.743	ENSOPRG00000018413	-	77	91.743	Ochotona_princeps
ENSDORG00000006391	Scaf8	100	92.593	ENSODEG00000007296	SCAF8	99	92.514	Octodon_degus
ENSDORG00000006391	Scaf8	100	55.220	ENSONIG00000008119	SCAF8	99	55.081	Oreochromis_niloticus
ENSDORG00000006391	Scaf8	99	94.146	ENSOCUG00000026063	SCAF8	99	94.066	Oryctolagus_cuniculus
ENSDORG00000006391	Scaf8	92	55.326	ENSORLG00000017358	SCAF8	77	67.273	Oryzias_latipes
ENSDORG00000006391	Scaf8	92	55.519	ENSORLG00020002214	SCAF8	77	67.394	Oryzias_latipes_hni
ENSDORG00000006391	Scaf8	92	55.500	ENSORLG00015015779	SCAF8	77	68.781	Oryzias_latipes_hsok
ENSDORG00000006391	Scaf8	90	65.661	ENSOMEG00000015471	SCAF8	77	65.893	Oryzias_melastigma
ENSDORG00000006391	Scaf8	99	93.038	ENSOGAG00000034223	SCAF8	94	92.959	Otolemur_garnettii
ENSDORG00000006391	Scaf8	99	92.016	ENSOARG00000004159	SCAF8	100	91.937	Ovis_aries
ENSDORG00000006391	Scaf8	100	93.375	ENSPPAG00000039826	SCAF8	99	93.592	Pan_paniscus
ENSDORG00000006391	Scaf8	100	92.981	ENSPPRG00000023175	SCAF8	99	92.902	Panthera_pardus
ENSDORG00000006391	Scaf8	99	93.196	ENSPTIG00000014836	SCAF8	99	93.117	Panthera_tigris_altaica
ENSDORG00000006391	Scaf8	100	93.454	ENSPTRG00000018727	SCAF8	99	93.454	Pan_troglodytes
ENSDORG00000006391	Scaf8	100	93.454	ENSPANG00000017489	SCAF8	99	92.326	Papio_anubis
ENSDORG00000006391	Scaf8	100	57.111	ENSPKIG00000021212	SCAF8	99	57.045	Paramormyrops_kingsleyae
ENSDORG00000006391	Scaf8	89	73.783	ENSPSIG00000008614	SCAF8	93	76.783	Pelodiscus_sinensis
ENSDORG00000006391	Scaf8	99	91.693	ENSPEMG00000010531	Scaf8	100	91.614	Peromyscus_maniculatus_bairdii
ENSDORG00000006391	Scaf8	100	85.512	ENSPCIG00000001141	SCAF8	99	85.624	Phascolarctos_cinereus
ENSDORG00000006391	Scaf8	86	69.279	ENSPFOG00000004176	SCAF8	99	54.601	Poecilia_formosa
ENSDORG00000006391	Scaf8	86	69.279	ENSPLAG00000021432	SCAF8	77	69.030	Poecilia_latipinna
ENSDORG00000006391	Scaf8	86	69.279	ENSPMEG00000007591	SCAF8	84	68.863	Poecilia_mexicana
ENSDORG00000006391	Scaf8	86	69.154	ENSPREG00000000652	SCAF8	77	68.905	Poecilia_reticulata
ENSDORG00000006391	Scaf8	100	92.205	ENSPPYG00000017121	SCAF8	99	91.654	Pongo_abelii
ENSDORG00000006391	Scaf8	85	96.441	ENSPCAG00000013044	SCAF8	90	96.441	Procavia_capensis
ENSDORG00000006391	Scaf8	100	93.770	ENSPCOG00000002067	SCAF8	99	93.681	Propithecus_coquereli
ENSDORG00000006391	Scaf8	98	89.583	ENSPVAG00000005582	SCAF8	99	90.625	Pteropus_vampyrus
ENSDORG00000006391	Scaf8	87	68.485	ENSPNYG00000007277	SCAF8	79	68.242	Pundamilia_nyererei
ENSDORG00000006391	Scaf8	86	68.025	ENSPNAG00000024740	SCAF8	81	68.395	Pygocentrus_nattereri
ENSDORG00000006391	Scaf8	100	90.615	ENSRNOG00000016919	Scaf8	99	90.823	Rattus_norvegicus
ENSDORG00000006391	Scaf8	100	93.533	ENSRBIG00000035769	SCAF8	99	93.750	Rhinopithecus_bieti
ENSDORG00000006391	Scaf8	100	93.454	ENSRROG00000013580	SCAF8	99	93.671	Rhinopithecus_roxellana
ENSDORG00000006391	Scaf8	100	93.060	ENSSBOG00000027023	SCAF8	99	92.981	Saimiri_boliviensis_boliviensis
ENSDORG00000006391	Scaf8	100	84.736	ENSSHAG00000009915	SCAF8	99	84.815	Sarcophilus_harrisii
ENSDORG00000006391	Scaf8	100	54.821	ENSSFOG00015009481	SCAF8	92	68.633	Scleropages_formosus
ENSDORG00000006391	Scaf8	87	67.715	ENSSMAG00000008275	SCAF8	76	67.594	Scophthalmus_maximus
ENSDORG00000006391	Scaf8	100	76.324	ENSSPUG00000015219	SCAF8	99	76.248	Sphenodon_punctatus
ENSDORG00000006391	Scaf8	100	92.429	ENSSSCG00000004070	SCAF8	100	92.474	Sus_scrofa
ENSDORG00000006391	Scaf8	99	77.329	ENSTGUG00000011151	SCAF8	100	78.588	Taeniopygia_guttata
ENSDORG00000006391	Scaf8	86	67.702	ENSTRUG00000009243	SCAF8	77	67.826	Takifugu_rubripes
ENSDORG00000006391	Scaf8	93	65.725	ENSTNIG00000016885	SCAF8	99	66.585	Tetraodon_nigroviridis
ENSDORG00000006391	Scaf8	99	92.247	ENSTTRG00000014538	SCAF8	100	92.168	Tursiops_truncatus
ENSDORG00000006391	Scaf8	100	92.271	ENSUAMG00000024736	SCAF8	99	92.338	Ursus_americanus
ENSDORG00000006391	Scaf8	98	92.474	ENSUMAG00000013404	SCAF8	100	92.394	Ursus_maritimus
ENSDORG00000006391	Scaf8	67	85.349	ENSVPAG00000012465	SCAF8	99	83.372	Vicugna_pacos
ENSDORG00000006391	Scaf8	99	92.801	ENSVVUG00000007532	SCAF8	100	92.634	Vulpes_vulpes
ENSDORG00000006391	Scaf8	100	60.978	ENSXETG00000013132	scaf8	99	60.826	Xenopus_tropicalis
ENSDORG00000006391	Scaf8	86	69.030	ENSXMAG00000019192	SCAF8	77	68.905	Xiphophorus_maculatus