EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006422 (Gene tree)
Gene ID: 105984385
Gene Symbol: Arid4b
Alias: 6330417L24Rik|6720480E17Rik|BRCAA1|RBBP1L1|Rbp1l1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 88269 bases
Position: chrKN672370.1:346068-434336
Accession: 105984385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017236	Tudor-knot	PF11717.8	1.7e-11	1	1
ENSDORP00000022188	Tudor-knot	PF11717.8	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031827	-	3936	-	ENSDORP00000022188	1311 (aa)	-	UPI000BACFBD6
ENSDORT00000023282	-	5545	XM_013014563	ENSDORP00000017236	1308 (aa)	XP_012870017	UPI000BAD0443
ENSDORT00000006422	-	3684	-	ENSDORP00000006012	1227 (aa)	-	UPI000BAD1C68

Gene Model

Click here to download ENSDORG00000006422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006422	Arid4b	100	92.536	ENSG00000054267	ARID4B	99	95.842	Homo_sapiens
ENSDORG00000006422	Arid4b	100	91.540	ENSAMEG00000008801	ARID4B	100	91.540	Ailuropoda_melanoleuca
ENSDORG00000006422	Arid4b	89	71.264	ENSACIG00000006313	tomm20a	99	70.575	Amphilophus_citrinellus
ENSDORG00000006422	Arid4b	99	51.962	ENSATEG00000014930	tomm20a	99	50.720	Anabas_testudineus
ENSDORG00000006422	Arid4b	100	76.471	ENSAPLG00000004422	ARID4B	99	76.488	Anas_platyrhynchos
ENSDORG00000006422	Arid4b	100	71.797	ENSACAG00000001289	ARID4B	100	72.803	Anolis_carolinensis
ENSDORG00000006422	Arid4b	100	92.542	ENSANAG00000038088	ARID4B	99	92.922	Aotus_nancymaae
ENSDORG00000006422	Arid4b	87	64.878	ENSACLG00000023521	tomm20a	98	64.878	Astatotilapia_calliptera
ENSDORG00000006422	Arid4b	72	89.333	ENSAMXG00000003657	tomm20a	95	78.421	Astyanax_mexicanus
ENSDORG00000006422	Arid4b	100	90.160	ENSBTAG00000000222	ARID4B	99	90.160	Bos_taurus
ENSDORG00000006422	Arid4b	100	91.698	ENSCJAG00000018055	ARID4B	99	91.698	Callithrix_jacchus
ENSDORG00000006422	Arid4b	100	91.991	ENSCAFG00000011439	ARID4B	99	91.991	Canis_familiaris
ENSDORG00000006422	Arid4b	99	91.724	ENSCAFG00020027130	ARID4B	99	91.724	Canis_lupus_dingo
ENSDORG00000006422	Arid4b	100	86.246	ENSCHIG00000020742	ARID4B	100	86.927	Capra_hircus
ENSDORG00000006422	Arid4b	100	91.159	ENSTSYG00000010028	ARID4B	99	91.159	Carlito_syrichta
ENSDORG00000006422	Arid4b	100	89.278	ENSCPOG00000034766	ARID4B	100	89.886	Cavia_porcellus
ENSDORG00000006422	Arid4b	100	92.542	ENSCCAG00000021520	ARID4B	99	92.922	Cebus_capucinus
ENSDORG00000006422	Arid4b	100	92.466	ENSCATG00000042166	ARID4B	99	92.770	Cercocebus_atys
ENSDORG00000006422	Arid4b	100	91.089	ENSCLAG00000003255	ARID4B	99	91.546	Chinchilla_lanigera
ENSDORG00000006422	Arid4b	100	92.466	ENSCSAG00000010069	ARID4B	99	92.846	Chlorocebus_sabaeus
ENSDORG00000006422	Arid4b	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
ENSDORG00000006422	Arid4b	100	76.684	ENSCPBG00000004501	ARID4B	99	76.667	Chrysemys_picta_bellii
ENSDORG00000006422	Arid4b	100	88.889	ENSCANG00000027498	ARID4B	99	83.710	Colobus_angolensis_palliatus
ENSDORG00000006422	Arid4b	100	90.327	ENSCGRG00001014397	Arid4b	99	90.861	Cricetulus_griseus_chok1gshd
ENSDORG00000006422	Arid4b	100	90.327	ENSCGRG00000004910	Arid4b	100	90.861	Cricetulus_griseus_crigri
ENSDORG00000006422	Arid4b	54	60.986	ENSCVAG00000003244	tomm20a	99	51.606	Cyprinodon_variegatus
ENSDORG00000006422	Arid4b	57	89.637	ENSDNOG00000005711	ARID4B	100	89.637	Dasypus_novemcinctus
ENSDORG00000006422	Arid4b	90	88.933	ENSETEG00000005596	ARID4B	92	88.369	Echinops_telfairi
ENSDORG00000006422	Arid4b	100	90.694	ENSEASG00005000677	ARID4B	99	90.770	Equus_asinus_asinus
ENSDORG00000006422	Arid4b	100	92.296	ENSECAG00000017836	ARID4B	99	92.754	Equus_caballus
ENSDORG00000006422	Arid4b	83	97.222	ENSEEUG00000005378	ARID4B	91	76.256	Erinaceus_europaeus
ENSDORG00000006422	Arid4b	57	41.191	ENSELUG00000018441	tomm20a	80	40.321	Esox_lucius
ENSDORG00000006422	Arid4b	100	91.152	ENSFCAG00000030096	ARID4B	99	91.152	Felis_catus
ENSDORG00000006422	Arid4b	100	76.970	ENSFALG00000013548	ARID4B	98	77.576	Ficedula_albicollis
ENSDORG00000006422	Arid4b	100	90.251	ENSFDAG00000014194	ARID4B	100	90.327	Fukomys_damarensis
ENSDORG00000006422	Arid4b	90	54.132	ENSGMOG00000018747	tomm20a	92	52.435	Gadus_morhua
ENSDORG00000006422	Arid4b	100	75.397	ENSGAGG00000020544	ARID4B	98	75.606	Gopherus_agassizii
ENSDORG00000006422	Arid4b	100	93.140	ENSGGOG00000022080	ARID4B	99	93.140	Gorilla_gorilla
ENSDORG00000006422	Arid4b	99	51.284	ENSHBUG00000020369	tomm20a	99	51.093	Haplochromis_burtoni
ENSDORG00000006422	Arid4b	100	90.646	ENSHGLG00000012546	ARID4B	99	90.570	Heterocephalus_glaber_female
ENSDORG00000006422	Arid4b	100	90.646	ENSHGLG00100015436	ARID4B	99	90.570	Heterocephalus_glaber_male
ENSDORG00000006422	Arid4b	91	73.608	ENSHCOG00000010376	tomm20a	95	73.786	Hippocampus_comes
ENSDORG00000006422	Arid4b	99	50.552	ENSIPUG00000014234	arid4b	99	50.805	Ictalurus_punctatus
ENSDORG00000006422	Arid4b	100	91.179	ENSSTOG00000002810	ARID4B	99	91.711	Ictidomys_tridecemlineatus
ENSDORG00000006422	Arid4b	100	87.043	ENSJJAG00000021368	Arid4b	99	87.500	Jaculus_jaculus
ENSDORG00000006422	Arid4b	87	52.683	ENSKMAG00000010987	tomm20a	97	86.139	Kryptolebias_marmoratus
ENSDORG00000006422	Arid4b	100	90.694	ENSLAFG00000014295	ARID4B	100	90.618	Loxodonta_africana
ENSDORG00000006422	Arid4b	100	92.390	ENSMFAG00000044016	ARID4B	99	92.770	Macaca_fascicularis
ENSDORG00000006422	Arid4b	100	92.390	ENSMMUG00000007141	ARID4B	99	92.770	Macaca_mulatta
ENSDORG00000006422	Arid4b	100	92.536	ENSMNEG00000014840	ARID4B	99	92.460	Macaca_nemestrina
ENSDORG00000006422	Arid4b	100	91.572	ENSMLEG00000033583	ARID4B	100	92.743	Mandrillus_leucophaeus
ENSDORG00000006422	Arid4b	99	51.211	ENSMZEG00005009879	tomm20a	99	51.020	Maylandia_zebra
ENSDORG00000006422	Arid4b	100	77.879	ENSMGAG00000011896	ARID4B	99	78.636	Meleagris_gallopavo
ENSDORG00000006422	Arid4b	100	92.097	ENSMICG00000016358	ARID4B	99	92.553	Microcebus_murinus
ENSDORG00000006422	Arid4b	87	76.029	ENSMMOG00000000561	tomm20a	95	75.000	Mola_mola
ENSDORG00000006422	Arid4b	100	83.257	ENSMODG00000008417	ARID4B	99	83.942	Monodelphis_domestica
ENSDORG00000006422	Arid4b	100	88.584	MGP_CAROLIEiJ_G0018236	Arid4b	99	88.584	Mus_caroli
ENSDORG00000006422	Arid4b	100	88.280	ENSMUSG00000039219	Arid4b	99	88.737	Mus_musculus
ENSDORG00000006422	Arid4b	100	88.584	MGP_PahariEiJ_G0019286	Arid4b	99	88.584	Mus_pahari
ENSDORG00000006422	Arid4b	100	88.432	MGP_SPRETEiJ_G0019094	Arid4b	99	88.889	Mus_spretus
ENSDORG00000006422	Arid4b	100	90.847	ENSMPUG00000002906	ARID4B	99	90.847	Mustela_putorius_furo
ENSDORG00000006422	Arid4b	100	88.298	ENSMLUG00000016232	ARID4B	100	88.298	Myotis_lucifugus
ENSDORG00000006422	Arid4b	100	88.258	ENSNGAG00000014629	Arid4b	99	87.955	Nannospalax_galili
ENSDORG00000006422	Arid4b	87	74.209	ENSNBRG00000019684	tomm20a	98	74.209	Neolamprologus_brichardi
ENSDORG00000006422	Arid4b	100	92.390	ENSNLEG00000002665	ARID4B	99	92.770	Nomascus_leucogenys
ENSDORG00000006422	Arid4b	100	90.632	ENSODEG00000005373	ARID4B	99	90.404	Octodon_degus
ENSDORG00000006422	Arid4b	100	91.476	ENSOCUG00000006605	ARID4B	100	91.857	Oryctolagus_cuniculus
ENSDORG00000006422	Arid4b	100	52.023	ENSORLG00000012510	tomm20a	99	52.869	Oryzias_latipes
ENSDORG00000006422	Arid4b	88	75.485	ENSORLG00020013988	tomm20a	98	75.182	Oryzias_latipes_hni
ENSDORG00000006422	Arid4b	88	76.098	ENSORLG00015022835	tomm20a	98	75.795	Oryzias_latipes_hsok
ENSDORG00000006422	Arid4b	100	52.357	ENSOMEG00000000521	tomm20a	99	53.061	Oryzias_melastigma
ENSDORG00000006422	Arid4b	100	82.887	ENSOGAG00000012476	ARID4B	55	82.754	Otolemur_garnettii
ENSDORG00000006422	Arid4b	99	89.579	ENSOARG00000003481	ARID4B	97	89.579	Ovis_aries
ENSDORG00000006422	Arid4b	100	92.841	ENSPPAG00000031651	ARID4B	99	92.765	Pan_paniscus
ENSDORG00000006422	Arid4b	100	91.304	ENSPPRG00000013739	ARID4B	99	91.304	Panthera_pardus
ENSDORG00000006422	Arid4b	100	89.245	ENSPTIG00000012520	ARID4B	99	89.245	Panthera_tigris_altaica
ENSDORG00000006422	Arid4b	100	93.069	ENSPTRG00000002129	ARID4B	99	92.993	Pan_troglodytes
ENSDORG00000006422	Arid4b	85	92.004	ENSPTRG00000048786	-	95	91.914	Pan_troglodytes
ENSDORG00000006422	Arid4b	100	91.933	ENSPANG00000013611	ARID4B	100	92.314	Papio_anubis
ENSDORG00000006422	Arid4b	94	74.980	ENSPSIG00000011632	ARID4B	99	75.912	Pelodiscus_sinensis
ENSDORG00000006422	Arid4b	93	92.473	ENSPCIG00000029756	ARID4B	99	87.103	Phascolarctos_cinereus
ENSDORG00000006422	Arid4b	99	51.154	ENSPFOG00000019430	tomm20a	99	51.357	Poecilia_formosa
ENSDORG00000006422	Arid4b	100	92.460	ENSPPYG00000000098	ARID4B	99	92.384	Pongo_abelii
ENSDORG00000006422	Arid4b	100	92.167	ENSPCOG00000024328	ARID4B	99	92.624	Propithecus_coquereli
ENSDORG00000006422	Arid4b	100	87.490	ENSPVAG00000015159	ARID4B	99	87.109	Pteropus_vampyrus
ENSDORG00000006422	Arid4b	99	50.486	ENSPNYG00000013988	tomm20a	99	50.444	Pundamilia_nyererei
ENSDORG00000006422	Arid4b	88	86.620	ENSRNOG00000016391	LOC100912163	97	86.620	Rattus_norvegicus
ENSDORG00000006422	Arid4b	100	83.800	ENSRBIG00000042029	ARID4B	100	84.551	Rhinopithecus_bieti
ENSDORG00000006422	Arid4b	100	92.466	ENSRROG00000045203	ARID4B	99	92.846	Rhinopithecus_roxellana
ENSDORG00000006422	Arid4b	83	91.408	ENSSBOG00000020196	ARID4B	100	91.865	Saimiri_boliviensis_boliviensis
ENSDORG00000006422	Arid4b	100	83.397	ENSSHAG00000015214	ARID4B	99	83.927	Sarcophilus_harrisii
ENSDORG00000006422	Arid4b	76	41.346	ENSSFOG00015008923	tomm20a	100	41.771	Scleropages_formosus
ENSDORG00000006422	Arid4b	100	49.075	ENSSFOG00015000132	arid4b	55	58.543	Scleropages_formosus
ENSDORG00000006422	Arid4b	100	76.515	ENSSPUG00000015466	ARID4B	98	75.833	Sphenodon_punctatus
ENSDORG00000006422	Arid4b	99	52.032	ENSSPAG00000007358	tomm20a	99	51.546	Stegastes_partitus
ENSDORG00000006422	Arid4b	100	90.847	ENSSSCG00000010156	ARID4B	99	90.847	Sus_scrofa
ENSDORG00000006422	Arid4b	100	77.380	ENSTGUG00000010246	ARID4B	99	77.456	Taeniopygia_guttata
ENSDORG00000006422	Arid4b	56	46.058	ENSTRUG00000002893	tomm20a	85	45.983	Takifugu_rubripes
ENSDORG00000006422	Arid4b	87	77.377	ENSTBEG00000003961	ARID4B	79	84.233	Tupaia_belangeri
ENSDORG00000006422	Arid4b	100	90.694	ENSTTRG00000002228	ARID4B	99	90.236	Tursiops_truncatus
ENSDORG00000006422	Arid4b	99	90.586	ENSUMAG00000006905	ARID4B	100	90.425	Ursus_maritimus
ENSDORG00000006422	Arid4b	69	89.802	ENSVPAG00000006841	ARID4B	69	90.085	Vicugna_pacos
ENSDORG00000006422	Arid4b	99	90.439	ENSVVUG00000008154	ARID4B	99	90.517	Vulpes_vulpes