EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006605 (Gene tree)
Gene ID: 105990320
Gene Symbol: R3hdm4
Alias: C030046I01Rik
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 12856 bases
Position: chrKN672410.1:3930776-3943631
Accession: 105990320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000026892	R3H	PF01424.22	1.3e-06	1	1
ENSDORP00000006185	R3H	PF01424.22	1.4e-06	1	1
ENSDORP00000019072	R3H	PF01424.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028464	-	1795	XM_013022683	ENSDORP00000026892	245 (aa)	XP_012878137	UPI000BAD28B2
ENSDORT00000006603	-	780	-	ENSDORP00000006185	259 (aa)	-	UPI000BACFCE0
ENSDORT00000027928	-	792	-	ENSDORP00000019072	263 (aa)	-	UPI000BAD0BE1

Gene Model

Click here to download ENSDORG00000006605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006605	R3hdm4	100	92.245	ENSG00000198858	R3HDM4	97	88.550	Homo_sapiens
ENSDORG00000006605	R3hdm4	100	88.163	ENSAMEG00000003001	R3HDM4	99	88.163	Ailuropoda_melanoleuca
ENSDORG00000006605	R3hdm4	96	56.067	ENSACIG00000004672	r3hdm4	90	56.067	Amphilophus_citrinellus
ENSDORG00000006605	R3hdm4	96	52.101	ENSATEG00000015913	r3hdm4	90	53.361	Anabas_testudineus
ENSDORG00000006605	R3hdm4	99	91.803	ENSANAG00000029748	R3HDM4	99	91.803	Aotus_nancymaae
ENSDORG00000006605	R3hdm4	100	90.204	ENSBTAG00000046406	R3HDM4	95	86.154	Bos_taurus
ENSDORG00000006605	R3hdm4	99	91.393	ENSCJAG00000020114	R3HDM4	95	88.281	Callithrix_jacchus
ENSDORG00000006605	R3hdm4	100	89.388	ENSCAFG00000019665	R3HDM4	93	87.843	Canis_familiaris
ENSDORG00000006605	R3hdm4	100	88.980	ENSCAFG00020016880	R3HDM4	93	87.451	Canis_lupus_dingo
ENSDORG00000006605	R3hdm4	100	90.612	ENSCHIG00000020110	R3HDM4	98	87.984	Capra_hircus
ENSDORG00000006605	R3hdm4	99	90.164	ENSCCAG00000019955	R3HDM4	94	86.923	Cebus_capucinus
ENSDORG00000006605	R3hdm4	100	90.688	ENSCATG00000037269	R3HDM4	91	91.498	Cercocebus_atys
ENSDORG00000006605	R3hdm4	100	91.837	ENSCLAG00000007094	R3HDM4	99	91.837	Chinchilla_lanigera
ENSDORG00000006605	R3hdm4	100	92.245	ENSCSAG00000012574	R3HDM4	91	92.245	Chlorocebus_sabaeus
ENSDORG00000006605	R3hdm4	99	69.547	ENSCPBG00000009805	R3HDM4	95	69.685	Chrysemys_picta_bellii
ENSDORG00000006605	R3hdm4	100	91.837	ENSCANG00000040439	R3HDM4	94	85.874	Colobus_angolensis_palliatus
ENSDORG00000006605	R3hdm4	100	90.244	ENSCGRG00001021650	R3hdm4	93	89.960	Cricetulus_griseus_chok1gshd
ENSDORG00000006605	R3hdm4	100	90.244	ENSCGRG00000013169	R3hdm4	93	89.960	Cricetulus_griseus_crigri
ENSDORG00000006605	R3hdm4	96	51.883	ENSCSEG00000018211	r3hdm4	90	52.301	Cynoglossus_semilaevis
ENSDORG00000006605	R3hdm4	96	55.649	ENSCVAG00000017127	r3hdm4	91	55.649	Cyprinodon_variegatus
ENSDORG00000006605	R3hdm4	100	90.612	ENSEASG00005021556	R3HDM4	96	85.393	Equus_asinus_asinus
ENSDORG00000006605	R3hdm4	100	90.612	ENSECAG00000000003	R3HDM4	92	89.328	Equus_caballus
ENSDORG00000006605	R3hdm4	100	89.796	ENSFCAG00000042437	R3HDM4	93	88.235	Felis_catus
ENSDORG00000006605	R3hdm4	99	67.901	ENSFALG00000013938	R3HDM4	99	67.901	Ficedula_albicollis
ENSDORG00000006605	R3hdm4	100	90.650	ENSFDAG00000017040	R3HDM4	99	90.650	Fukomys_damarensis
ENSDORG00000006605	R3hdm4	96	55.417	ENSFHEG00000017636	r3hdm4	91	55.417	Fundulus_heteroclitus
ENSDORG00000006605	R3hdm4	96	50.638	ENSGMOG00000001231	r3hdm4	95	51.695	Gadus_morhua
ENSDORG00000006605	R3hdm4	99	66.122	ENSGALG00000001998	R3HDM4	96	65.234	Gallus_gallus
ENSDORG00000006605	R3hdm4	96	56.485	ENSGAFG00000004173	r3hdm4	91	56.485	Gambusia_affinis
ENSDORG00000006605	R3hdm4	99	69.136	ENSGAGG00000019698	R3HDM4	95	68.504	Gopherus_agassizii
ENSDORG00000006605	R3hdm4	100	92.245	ENSGGOG00000008040	R3HDM4	99	92.245	Gorilla_gorilla
ENSDORG00000006605	R3hdm4	96	56.485	ENSHBUG00000014810	r3hdm4	90	56.485	Haplochromis_burtoni
ENSDORG00000006605	R3hdm4	100	89.388	ENSHGLG00000016194	R3HDM4	93	87.747	Heterocephalus_glaber_female
ENSDORG00000006605	R3hdm4	96	55.085	ENSHCOG00000008422	r3hdm4	90	55.085	Hippocampus_comes
ENSDORG00000006605	R3hdm4	96	54.852	ENSIPUG00000006716	r3hdm4	90	54.852	Ictalurus_punctatus
ENSDORG00000006605	R3hdm4	100	88.163	ENSSTOG00000023015	R3HDM4	99	88.163	Ictidomys_tridecemlineatus
ENSDORG00000006605	R3hdm4	100	91.057	ENSJJAG00000012475	R3hdm4	95	89.147	Jaculus_jaculus
ENSDORG00000006605	R3hdm4	96	55.417	ENSKMAG00000005853	r3hdm4	90	55.417	Kryptolebias_marmoratus
ENSDORG00000006605	R3hdm4	96	55.042	ENSLBEG00000000730	r3hdm4	90	55.042	Labrus_bergylta
ENSDORG00000006605	R3hdm4	99	61.317	ENSLACG00000016445	R3HDM4	93	61.317	Latimeria_chalumnae
ENSDORG00000006605	R3hdm4	99	56.452	ENSLOCG00000002423	r3hdm4	95	55.469	Lepisosteus_oculatus
ENSDORG00000006605	R3hdm4	100	88.980	ENSLAFG00000017796	R3HDM4	95	88.710	Loxodonta_africana
ENSDORG00000006605	R3hdm4	100	92.245	ENSMFAG00000044131	R3HDM4	91	92.245	Macaca_fascicularis
ENSDORG00000006605	R3hdm4	91	92.411	ENSMMUG00000009682	R3HDM4	90	92.411	Macaca_mulatta
ENSDORG00000006605	R3hdm4	100	92.245	ENSMNEG00000044115	R3HDM4	99	91.870	Macaca_nemestrina
ENSDORG00000006605	R3hdm4	100	89.879	ENSMLEG00000035693	R3HDM4	92	90.800	Mandrillus_leucophaeus
ENSDORG00000006605	R3hdm4	84	57.005	ENSMAMG00000005652	r3hdm4	82	57.005	Mastacembelus_armatus
ENSDORG00000006605	R3hdm4	100	89.431	ENSMAUG00000010611	R3hdm4	99	87.692	Mesocricetus_auratus
ENSDORG00000006605	R3hdm4	100	91.429	ENSMICG00000010124	R3HDM4	93	90.119	Microcebus_murinus
ENSDORG00000006605	R3hdm4	100	88.980	ENSMOCG00000002646	R3hdm4	94	87.251	Microtus_ochrogaster
ENSDORG00000006605	R3hdm4	96	54.393	ENSMMOG00000008253	r3hdm4	91	54.393	Mola_mola
ENSDORG00000006605	R3hdm4	95	66.953	ENSMODG00000005698	R3HDM4	99	66.953	Monodelphis_domestica
ENSDORG00000006605	R3hdm4	96	55.230	ENSMALG00000018856	r3hdm4	90	55.230	Monopterus_albus
ENSDORG00000006605	R3hdm4	99	89.344	MGP_CAROLIEiJ_G0015551	R3hdm4	92	89.344	Mus_caroli
ENSDORG00000006605	R3hdm4	99	88.934	ENSMUSG00000035781	R3hdm4	92	90.164	Mus_musculus
ENSDORG00000006605	R3hdm4	99	89.754	MGP_PahariEiJ_G0030964	R3hdm4	97	86.100	Mus_pahari
ENSDORG00000006605	R3hdm4	99	88.115	MGP_SPRETEiJ_G0016369	-	77	89.344	Mus_spretus
ENSDORG00000006605	R3hdm4	100	88.163	ENSMPUG00000009394	R3HDM4	91	88.306	Mustela_putorius_furo
ENSDORG00000006605	R3hdm4	96	56.067	ENSNBRG00000004438	r3hdm4	90	56.067	Neolamprologus_brichardi
ENSDORG00000006605	R3hdm4	93	90.558	ENSNLEG00000001022	R3HDM4	100	90.558	Nomascus_leucogenys
ENSDORG00000006605	R3hdm4	97	66.946	ENSMEUG00000011020	R3HDM4	99	66.946	Notamacropus_eugenii
ENSDORG00000006605	R3hdm4	100	91.429	ENSODEG00000011745	R3HDM4	96	87.405	Octodon_degus
ENSDORG00000006605	R3hdm4	96	56.485	ENSONIG00000012675	r3hdm4	83	56.485	Oreochromis_niloticus
ENSDORG00000006605	R3hdm4	96	55.696	ENSOMEG00000003005	r3hdm4	90	55.696	Oryzias_melastigma
ENSDORG00000006605	R3hdm4	100	91.020	ENSOGAG00000025656	R3HDM4	98	88.550	Otolemur_garnettii
ENSDORG00000006605	R3hdm4	100	90.204	ENSOARG00000009945	R3HDM4	99	90.204	Ovis_aries
ENSDORG00000006605	R3hdm4	100	92.653	ENSPPAG00000042371	R3HDM4	99	92.653	Pan_paniscus
ENSDORG00000006605	R3hdm4	100	92.245	ENSPANG00000015203	R3HDM4	91	92.245	Papio_anubis
ENSDORG00000006605	R3hdm4	94	55.652	ENSPKIG00000007421	r3hdm4	88	55.556	Paramormyrops_kingsleyae
ENSDORG00000006605	R3hdm4	96	52.743	ENSPMGG00000020467	r3hdm4	89	52.743	Periophthalmus_magnuspinnatus
ENSDORG00000006605	R3hdm4	100	90.612	ENSPEMG00000008365	Tmem259	100	90.612	Peromyscus_maniculatus_bairdii
ENSDORG00000006605	R3hdm4	96	55.649	ENSPFOG00000003199	r3hdm4	91	55.649	Poecilia_formosa
ENSDORG00000006605	R3hdm4	96	55.230	ENSPMEG00000014183	r3hdm4	91	55.230	Poecilia_mexicana
ENSDORG00000006605	R3hdm4	96	56.067	ENSPREG00000010709	r3hdm4	91	56.067	Poecilia_reticulata
ENSDORG00000006605	R3hdm4	100	91.837	ENSPPYG00000009297	R3HDM4	92	91.935	Pongo_abelii
ENSDORG00000006605	R3hdm4	62	88.235	ENSPCAG00000010997	R3HDM4	55	88.235	Procavia_capensis
ENSDORG00000006605	R3hdm4	100	91.837	ENSPCOG00000016785	R3HDM4	93	90.514	Propithecus_coquereli
ENSDORG00000006605	R3hdm4	96	56.485	ENSPNYG00000017489	r3hdm4	90	56.485	Pundamilia_nyererei
ENSDORG00000006605	R3hdm4	99	88.525	ENSRNOG00000011489	R3hdm4	92	88.525	Rattus_norvegicus
ENSDORG00000006605	R3hdm4	100	92.245	ENSRROG00000028842	R3HDM4	91	92.245	Rhinopithecus_roxellana
ENSDORG00000006605	R3hdm4	99	88.306	ENSSBOG00000019298	R3HDM4	73	88.492	Saimiri_boliviensis_boliviensis
ENSDORG00000006605	R3hdm4	60	71.918	ENSSHAG00000003036	-	99	71.918	Sarcophilus_harrisii
ENSDORG00000006605	R3hdm4	96	54.894	ENSSFOG00015020574	r3hdm4	85	55.319	Scleropages_formosus
ENSDORG00000006605	R3hdm4	96	55.000	ENSSMAG00000021090	r3hdm4	67	55.000	Scophthalmus_maximus
ENSDORG00000006605	R3hdm4	96	56.250	ENSSDUG00000008488	r3hdm4	90	56.250	Seriola_dumerili
ENSDORG00000006605	R3hdm4	96	56.250	ENSSLDG00000025328	r3hdm4	90	56.250	Seriola_lalandi_dorsalis
ENSDORG00000006605	R3hdm4	99	68.724	ENSSPUG00000005434	R3HDM4	98	67.059	Sphenodon_punctatus
ENSDORG00000006605	R3hdm4	96	53.165	ENSSPAG00000002562	r3hdm4	90	53.165	Stegastes_partitus
ENSDORG00000006605	R3hdm4	100	90.612	ENSSSCG00000013419	R3HDM4	92	89.328	Sus_scrofa
ENSDORG00000006605	R3hdm4	85	62.085	ENSTGUG00000000663	R3HDM4	100	62.085	Taeniopygia_guttata
ENSDORG00000006605	R3hdm4	100	87.347	ENSTTRG00000001470	R3HDM4	99	87.755	Tursiops_truncatus
ENSDORG00000006605	R3hdm4	91	89.286	ENSUAMG00000005751	R3HDM4	99	89.286	Ursus_americanus
ENSDORG00000006605	R3hdm4	100	89.388	ENSVVUG00000022685	R3HDM4	93	88.235	Vulpes_vulpes
ENSDORG00000006605	R3hdm4	97	45.228	ENSXETG00000033624	R3HDM4	91	45.228	Xenopus_tropicalis
ENSDORG00000006605	R3hdm4	96	55.833	ENSXCOG00000005127	r3hdm4	91	55.833	Xiphophorus_couchianus
ENSDORG00000006605	R3hdm4	96	56.067	ENSXMAG00000022875	r3hdm4	91	56.067	Xiphophorus_maculatus