EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006735 (Gene tree)
Gene ID: 105994108
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 62821 bases
Position: chrKN672450.1:4142435-4205255
Accession: 105994108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000006315	Npa1	PF11707.8	1.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000006740	-	6798	XM_013027535	ENSDORP00000006315	2265 (aa)	XP_012882989	UPI000BACEEF7

Gene Model

Click here to download ENSDORG00000006735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006735	Urb1	99	81.175	ENSG00000142207	URB1	100	81.030	Homo_sapiens
ENSDORG00000006735	Urb1	97	47.843	ENSAPOG00000020308	urb1	99	47.920	Acanthochromis_polyacanthus
ENSDORG00000006735	Urb1	100	77.465	ENSAMEG00000011998	URB1	99	77.553	Ailuropoda_melanoleuca
ENSDORG00000006735	Urb1	95	44.562	ENSACIG00000003248	urb1	96	44.516	Amphilophus_citrinellus
ENSDORG00000006735	Urb1	99	41.008	ENSAOCG00000010364	urb1	99	41.051	Amphiprion_ocellaris
ENSDORG00000006735	Urb1	97	51.899	ENSAPEG00000010758	urb1	99	51.899	Amphiprion_percula
ENSDORG00000006735	Urb1	99	43.564	ENSATEG00000011790	urb1	99	43.409	Anabas_testudineus
ENSDORG00000006735	Urb1	97	55.756	ENSAPLG00000012791	URB1	100	55.666	Anas_platyrhynchos
ENSDORG00000006735	Urb1	98	52.501	ENSACAG00000002817	URB1	98	52.402	Anolis_carolinensis
ENSDORG00000006735	Urb1	100	80.026	ENSANAG00000024617	URB1	100	80.026	Aotus_nancymaae
ENSDORG00000006735	Urb1	99	45.035	ENSACLG00000024865	urb1	99	44.759	Astatotilapia_calliptera
ENSDORG00000006735	Urb1	99	39.938	ENSAMXG00000012306	urb1	99	39.894	Astyanax_mexicanus
ENSDORG00000006735	Urb1	99	74.077	ENSBTAG00000012412	URB1	99	74.121	Bos_taurus
ENSDORG00000006735	Urb1	100	79.394	ENSCJAG00000009118	URB1	100	79.394	Callithrix_jacchus
ENSDORG00000006735	Urb1	100	78.192	ENSCAFG00000008892	URB1	100	78.192	Canis_familiaris
ENSDORG00000006735	Urb1	100	77.905	ENSCAFG00020025987	-	100	77.905	Canis_lupus_dingo
ENSDORG00000006735	Urb1	100	77.157	ENSCAFG00020025994	-	100	77.157	Canis_lupus_dingo
ENSDORG00000006735	Urb1	99	73.902	ENSCHIG00000015645	URB1	99	73.989	Capra_hircus
ENSDORG00000006735	Urb1	100	79.260	ENSTSYG00000013286	URB1	99	79.260	Carlito_syrichta
ENSDORG00000006735	Urb1	98	77.833	ENSCAPG00000015589	URB1	99	77.833	Cavia_aperea
ENSDORG00000006735	Urb1	99	78.783	ENSCPOG00000006748	URB1	99	78.783	Cavia_porcellus
ENSDORG00000006735	Urb1	100	80.062	ENSCCAG00000021299	URB1	100	80.062	Cebus_capucinus
ENSDORG00000006735	Urb1	100	80.194	ENSCATG00000042630	URB1	100	80.194	Cercocebus_atys
ENSDORG00000006735	Urb1	100	80.106	ENSCLAG00000005262	URB1	99	80.167	Chinchilla_lanigera
ENSDORG00000006735	Urb1	100	78.834	ENSCSAG00000009584	URB1	100	78.834	Chlorocebus_sabaeus
ENSDORG00000006735	Urb1	99	58.108	ENSCPBG00000006454	URB1	99	58.072	Chrysemys_picta_bellii
ENSDORG00000006735	Urb1	100	80.062	ENSCANG00000031088	URB1	100	80.062	Colobus_angolensis_palliatus
ENSDORG00000006735	Urb1	99	75.624	ENSCGRG00001010616	Urb1	100	75.407	Cricetulus_griseus_chok1gshd
ENSDORG00000006735	Urb1	98	75.315	ENSCGRG00000015840	Urb1	100	75.315	Cricetulus_griseus_crigri
ENSDORG00000006735	Urb1	97	48.913	ENSCSEG00000012616	urb1	99	48.913	Cynoglossus_semilaevis
ENSDORG00000006735	Urb1	98	44.754	ENSCVAG00000009076	urb1	98	52.654	Cyprinodon_variegatus
ENSDORG00000006735	Urb1	99	43.970	ENSDARG00000060308	urb1	99	44.014	Danio_rerio
ENSDORG00000006735	Urb1	85	77.019	ENSDNOG00000015586	URB1	99	77.019	Dasypus_novemcinctus
ENSDORG00000006735	Urb1	92	77.636	ENSETEG00000009080	URB1	92	77.636	Echinops_telfairi
ENSDORG00000006735	Urb1	99	78.556	ENSEASG00005007711	URB1	99	78.556	Equus_asinus_asinus
ENSDORG00000006735	Urb1	94	87.802	ENSECAG00000013206	URB1	99	86.130	Equus_caballus
ENSDORG00000006735	Urb1	55	83.817	ENSEEUG00000003626	-	55	83.817	Erinaceus_europaeus
ENSDORG00000006735	Urb1	99	44.533	ENSELUG00000020516	urb1	98	44.710	Esox_lucius
ENSDORG00000006735	Urb1	99	77.758	ENSFCAG00000002177	URB1	99	77.846	Felis_catus
ENSDORG00000006735	Urb1	98	50.661	ENSFALG00000004636	URB1	99	50.705	Ficedula_albicollis
ENSDORG00000006735	Urb1	100	79.121	ENSFDAG00000007288	URB1	95	79.121	Fukomys_damarensis
ENSDORG00000006735	Urb1	99	41.550	ENSFHEG00000000202	urb1	99	42.285	Fundulus_heteroclitus
ENSDORG00000006735	Urb1	92	47.703	ENSGMOG00000001838	urb1	93	47.308	Gadus_morhua
ENSDORG00000006735	Urb1	99	55.711	ENSGALG00000015887	URB1	99	55.711	Gallus_gallus
ENSDORG00000006735	Urb1	93	53.398	ENSGAFG00000020694	urb1	97	53.017	Gambusia_affinis
ENSDORG00000006735	Urb1	99	44.205	ENSGACG00000011703	urb1	99	44.278	Gasterosteus_aculeatus
ENSDORG00000006735	Urb1	99	57.491	ENSGAGG00000022544	URB1	99	57.454	Gopherus_agassizii
ENSDORG00000006735	Urb1	100	80.986	ENSGGOG00000000285	URB1	100	80.986	Gorilla_gorilla
ENSDORG00000006735	Urb1	99	45.079	ENSHBUG00000001904	urb1	99	44.802	Haplochromis_burtoni
ENSDORG00000006735	Urb1	99	78.454	ENSHGLG00000004907	URB1	99	78.454	Heterocephalus_glaber_female
ENSDORG00000006735	Urb1	99	79.049	ENSHGLG00100010749	URB1	99	79.049	Heterocephalus_glaber_male
ENSDORG00000006735	Urb1	69	52.811	ENSHCOG00000018683	urb1	97	53.414	Hippocampus_comes
ENSDORG00000006735	Urb1	99	39.833	ENSIPUG00000014721	urb1	99	39.938	Ictalurus_punctatus
ENSDORG00000006735	Urb1	100	81.310	ENSSTOG00000004539	URB1	100	81.310	Ictidomys_tridecemlineatus
ENSDORG00000006735	Urb1	95	47.953	ENSKMAG00000006001	urb1	99	47.331	Kryptolebias_marmoratus
ENSDORG00000006735	Urb1	96	41.171	ENSLBEG00000027208	urb1	98	50.636	Labrus_bergylta
ENSDORG00000006735	Urb1	99	47.879	ENSLACG00000017059	URB1	99	47.792	Latimeria_chalumnae
ENSDORG00000006735	Urb1	99	45.363	ENSLOCG00000009190	urb1	99	45.276	Lepisosteus_oculatus
ENSDORG00000006735	Urb1	99	75.175	ENSLAFG00000010407	URB1	100	75.175	Loxodonta_africana
ENSDORG00000006735	Urb1	100	80.018	ENSMFAG00000034391	URB1	97	80.018	Macaca_fascicularis
ENSDORG00000006735	Urb1	100	79.930	ENSMMUG00000010295	URB1	100	79.930	Macaca_mulatta
ENSDORG00000006735	Urb1	100	78.653	ENSMNEG00000032981	URB1	100	78.653	Macaca_nemestrina
ENSDORG00000006735	Urb1	100	80.150	ENSMLEG00000041435	URB1	100	80.150	Mandrillus_leucophaeus
ENSDORG00000006735	Urb1	99	43.051	ENSMAMG00000011238	urb1	99	43.051	Mastacembelus_armatus
ENSDORG00000006735	Urb1	99	40.297	ENSMZEG00005011862	urb1	99	39.931	Maylandia_zebra
ENSDORG00000006735	Urb1	98	56.183	ENSMGAG00000014512	URB1	99	56.139	Meleagris_gallopavo
ENSDORG00000006735	Urb1	93	78.394	ENSMAUG00000010516	Urb1	99	78.394	Mesocricetus_auratus
ENSDORG00000006735	Urb1	99	79.005	ENSMICG00000016424	URB1	99	79.005	Microcebus_murinus
ENSDORG00000006735	Urb1	99	74.438	ENSMOCG00000012613	Urb1	99	74.438	Microtus_ochrogaster
ENSDORG00000006735	Urb1	99	62.593	ENSMODG00000021076	URB1	100	62.549	Monodelphis_domestica
ENSDORG00000006735	Urb1	96	51.538	ENSMALG00000017411	urb1	99	51.538	Monopterus_albus
ENSDORG00000006735	Urb1	99	75.748	MGP_CAROLIEiJ_G0020948	Urb1	99	75.748	Mus_caroli
ENSDORG00000006735	Urb1	99	75.836	ENSMUSG00000039929	Urb1	99	75.836	Mus_musculus
ENSDORG00000006735	Urb1	99	75.968	MGP_PahariEiJ_G0016653	Urb1	99	75.968	Mus_pahari
ENSDORG00000006735	Urb1	99	76.046	MGP_SPRETEiJ_G0021854	Urb1	99	76.046	Mus_spretus
ENSDORG00000006735	Urb1	100	77.048	ENSMPUG00000001123	URB1	99	77.106	Mustela_putorius_furo
ENSDORG00000006735	Urb1	99	77.445	ENSNGAG00000001905	Urb1	99	77.445	Nannospalax_galili
ENSDORG00000006735	Urb1	82	45.461	ENSNBRG00000001049	urb1	99	45.286	Neolamprologus_brichardi
ENSDORG00000006735	Urb1	99	78.789	ENSNLEG00000026872	URB1	100	78.653	Nomascus_leucogenys
ENSDORG00000006735	Urb1	93	66.284	ENSMEUG00000010828	URB1	94	66.284	Notamacropus_eugenii
ENSDORG00000006735	Urb1	99	72.371	ENSOPRG00000013482	URB1	100	72.371	Ochotona_princeps
ENSDORG00000006735	Urb1	100	78.257	ENSODEG00000002587	URB1	99	78.257	Octodon_degus
ENSDORG00000006735	Urb1	99	45.209	ENSONIG00000005599	urb1	99	45.043	Oreochromis_niloticus
ENSDORG00000006735	Urb1	99	78.067	ENSOCUG00000009381	URB1	99	78.067	Oryctolagus_cuniculus
ENSDORG00000006735	Urb1	99	43.610	ENSORLG00000003429	urb1	99	43.610	Oryzias_latipes
ENSDORG00000006735	Urb1	99	43.648	ENSORLG00020013785	urb1	99	43.648	Oryzias_latipes_hni
ENSDORG00000006735	Urb1	99	42.304	ENSORLG00015019421	urb1	97	46.267	Oryzias_latipes_hsok
ENSDORG00000006735	Urb1	78	50.769	ENSOMEG00000002094	urb1	97	50.769	Oryzias_melastigma
ENSDORG00000006735	Urb1	99	79.233	ENSOGAG00000017140	URB1	99	79.233	Otolemur_garnettii
ENSDORG00000006735	Urb1	97	75.573	ENSOARG00000013679	URB1	99	75.488	Ovis_aries
ENSDORG00000006735	Urb1	100	81.426	ENSPPAG00000003423	URB1	100	81.426	Pan_paniscus
ENSDORG00000006735	Urb1	99	78.023	ENSPPRG00000023131	URB1	99	78.023	Panthera_pardus
ENSDORG00000006735	Urb1	93	76.244	ENSPTIG00000016125	URB1	99	76.244	Panthera_tigris_altaica
ENSDORG00000006735	Urb1	100	81.294	ENSPTRG00000013852	URB1	100	81.294	Pan_troglodytes
ENSDORG00000006735	Urb1	100	80.238	ENSPANG00000021964	URB1	100	80.238	Papio_anubis
ENSDORG00000006735	Urb1	97	46.768	ENSPKIG00000003683	urb1	96	46.858	Paramormyrops_kingsleyae
ENSDORG00000006735	Urb1	99	75.728	ENSPEMG00000021205	Urb1	99	75.728	Peromyscus_maniculatus_bairdii
ENSDORG00000006735	Urb1	71	36.456	ENSPMAG00000009733	URB1	100	34.035	Petromyzon_marinus
ENSDORG00000006735	Urb1	99	62.358	ENSPCIG00000016350	URB1	100	62.314	Phascolarctos_cinereus
ENSDORG00000006735	Urb1	96	43.590	ENSPLAG00000004371	urb1	99	43.553	Poecilia_latipinna
ENSDORG00000006735	Urb1	99	44.205	ENSPMEG00000006634	urb1	99	44.283	Poecilia_mexicana
ENSDORG00000006735	Urb1	98	44.710	ENSPREG00000013453	urb1	98	44.533	Poecilia_reticulata
ENSDORG00000006735	Urb1	99	80.424	ENSPPYG00000011359	URB1	100	80.282	Pongo_abelii
ENSDORG00000006735	Urb1	99	65.948	ENSPCAG00000007430	URB1	99	65.904	Procavia_capensis
ENSDORG00000006735	Urb1	100	80.669	ENSPCOG00000022695	URB1	100	80.669	Propithecus_coquereli
ENSDORG00000006735	Urb1	100	77.333	ENSPVAG00000000889	URB1	100	77.333	Pteropus_vampyrus
ENSDORG00000006735	Urb1	99	43.336	ENSPNYG00000010589	urb1	99	43.076	Pundamilia_nyererei
ENSDORG00000006735	Urb1	99	40.448	ENSPNAG00000019324	urb1	99	40.352	Pygocentrus_nattereri
ENSDORG00000006735	Urb1	99	75.539	ENSRNOG00000002080	Urb1	99	75.671	Rattus_norvegicus
ENSDORG00000006735	Urb1	100	79.842	ENSRBIG00000033122	URB1	100	79.842	Rhinopithecus_bieti
ENSDORG00000006735	Urb1	100	79.886	ENSRROG00000040237	URB1	100	79.886	Rhinopithecus_roxellana
ENSDORG00000006735	Urb1	100	79.938	ENSSBOG00000027672	URB1	100	79.938	Saimiri_boliviensis_boliviensis
ENSDORG00000006735	Urb1	99	62.253	ENSSHAG00000005140	URB1	100	62.210	Sarcophilus_harrisii
ENSDORG00000006735	Urb1	93	46.400	ENSSFOG00015000339	urb1	99	46.403	Scleropages_formosus
ENSDORG00000006735	Urb1	99	43.889	ENSSMAG00000003782	urb1	99	44.106	Scophthalmus_maximus
ENSDORG00000006735	Urb1	99	44.624	ENSSDUG00000012313	urb1	99	44.580	Seriola_dumerili
ENSDORG00000006735	Urb1	99	44.576	ENSSLDG00000023179	urb1	99	44.576	Seriola_lalandi_dorsalis
ENSDORG00000006735	Urb1	99	54.185	ENSSPUG00000012447	URB1	99	54.121	Sphenodon_punctatus
ENSDORG00000006735	Urb1	99	44.125	ENSSPAG00000006325	urb1	99	44.169	Stegastes_partitus
ENSDORG00000006735	Urb1	100	75.979	ENSSSCG00000032024	URB1	100	75.979	Sus_scrofa
ENSDORG00000006735	Urb1	73	57.844	ENSTGUG00000013442	URB1	99	57.844	Taeniopygia_guttata
ENSDORG00000006735	Urb1	99	43.526	ENSTRUG00000009372	urb1	99	43.450	Takifugu_rubripes
ENSDORG00000006735	Urb1	99	42.870	ENSTNIG00000016277	urb1	99	42.713	Tetraodon_nigroviridis
ENSDORG00000006735	Urb1	81	80.636	ENSTBEG00000010044	URB1	81	80.636	Tupaia_belangeri
ENSDORG00000006735	Urb1	90	77.487	ENSTTRG00000007712	URB1	92	77.801	Tursiops_truncatus
ENSDORG00000006735	Urb1	100	77.485	ENSUAMG00000012231	URB1	99	77.485	Ursus_americanus
ENSDORG00000006735	Urb1	92	79.150	ENSUMAG00000017419	URB1	98	79.150	Ursus_maritimus
ENSDORG00000006735	Urb1	68	87.302	ENSVPAG00000001164	URB1	68	87.302	Vicugna_pacos
ENSDORG00000006735	Urb1	100	77.880	ENSVVUG00000000551	URB1	100	77.880	Vulpes_vulpes
ENSDORG00000006735	Urb1	99	50.518	ENSXETG00000009895	urb1	99	50.475	Xenopus_tropicalis
ENSDORG00000006735	Urb1	99	41.744	ENSXCOG00000005500	urb1	98	41.967	Xiphophorus_couchianus
ENSDORG00000006735	Urb1	99	41.832	ENSXMAG00000007253	urb1	98	42.082	Xiphophorus_maculatus