EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000006819 (Gene tree)
Gene ID: 106003222
Gene Symbol: Rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 26497 bases
Position: chrKN672353.1:23034737-23061233
Accession: 106003222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000006388	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000006818	-	1783	XM_013038058	ENSDORP00000006388	216 (aa)	XP_012893512	A0A1S3GZY2

Gene Model

Click here to download ENSDORG00000006819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000006819	Rab5c	100	87.963	ENSDORG00000024958	-	100	87.963
ENSDORG00000006819	Rab5c	81	42.938	ENSDORG00000029360	-	84	42.938
ENSDORG00000006819	Rab5c	73	31.250	ENSDORG00000011452	Rab34	62	31.250
ENSDORG00000006819	Rab5c	85	38.421	ENSDORG00000008920	Rab12	96	36.000
ENSDORG00000006819	Rab5c	75	36.585	ENSDORG00000029496	Rab39b	77	36.585
ENSDORG00000006819	Rab5c	89	41.294	ENSDORG00000002922	Rab25	93	41.294
ENSDORG00000006819	Rab5c	76	42.683	ENSDORG00000023851	Rab14	76	42.683
ENSDORG00000006819	Rab5c	78	42.604	ENSDORG00000015066	-	83	42.604
ENSDORG00000006819	Rab5c	77	43.713	ENSDORG00000012048	Rab2b	79	45.395
ENSDORG00000006819	Rab5c	81	33.702	ENSDORG00000028079	Hras	94	33.702
ENSDORG00000006819	Rab5c	75	40.361	ENSDORG00000024129	Rab33a	70	40.361
ENSDORG00000006819	Rab5c	93	37.681	ENSDORG00000023618	Rab33b	89	37.681
ENSDORG00000006819	Rab5c	62	31.690	ENSDORG00000023904	Arl8b	73	31.690
ENSDORG00000006819	Rab5c	91	40.816	ENSDORG00000027784	Rab6a	93	40.816
ENSDORG00000006819	Rab5c	89	43.077	ENSDORG00000028628	-	95	43.077
ENSDORG00000006819	Rab5c	77	43.023	ENSDORG00000027671	-	83	43.023
ENSDORG00000006819	Rab5c	90	42.995	ENSDORG00000006304	Rab11b	94	42.995
ENSDORG00000006819	Rab5c	91	39.801	ENSDORG00000028596	-	94	39.801
ENSDORG00000006819	Rab5c	89	37.949	ENSDORG00000000972	Rab35	96	37.949
ENSDORG00000006819	Rab5c	89	38.542	ENSDORG00000001591	Rab13	95	38.542
ENSDORG00000006819	Rab5c	88	32.821	ENSDORG00000023607	Rab42	90	32.821
ENSDORG00000006819	Rab5c	94	41.379	ENSDORG00000026441	Rab6b	98	41.379
ENSDORG00000006819	Rab5c	74	36.875	ENSDORG00000028344	Rab23	67	36.875
ENSDORG00000006819	Rab5c	81	37.143	ENSDORG00000025986	Rab15	95	35.149
ENSDORG00000006819	Rab5c	71	35.294	ENSDORG00000000003	Rabl2	67	35.294
ENSDORG00000006819	Rab5c	89	44.845	ENSDORG00000002511	Rab1b	96	44.845
ENSDORG00000006819	Rab5c	75	44.099	ENSDORG00000025014	Rab2a	76	44.099
ENSDORG00000006819	Rab5c	83	39.459	ENSDORG00000010504	-	91	39.459
ENSDORG00000006819	Rab5c	89	34.848	ENSDORG00000009342	Rab9	97	34.848
ENSDORG00000006819	Rab5c	75	32.515	ENSDORG00000011469	-	85	32.515
ENSDORG00000006819	Rab5c	75	31.902	ENSDORG00000025267	Nras	85	31.902
ENSDORG00000006819	Rab5c	95	31.390	ENSDORG00000005225	Rab36	62	31.579
ENSDORG00000006819	Rab5c	97	86.667	ENSDORG00000025063	Rab5b	98	86.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006819	Rab5c	100	98.611	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSDORG00000006819	Rab5c	99	89.767	ENSAPOG00000016864	rab5c	98	92.093	Acanthochromis_polyacanthus
ENSDORG00000006819	Rab5c	100	98.611	ENSAMEG00000006003	RAB5C	100	98.611	Ailuropoda_melanoleuca
ENSDORG00000006819	Rab5c	99	89.352	ENSACIG00000010896	rab5c	98	91.204	Amphilophus_citrinellus
ENSDORG00000006819	Rab5c	99	89.815	ENSAOCG00000016614	rab5c	98	92.130	Amphiprion_ocellaris
ENSDORG00000006819	Rab5c	97	89.573	ENSAPEG00000017868	-	97	91.943	Amphiprion_percula
ENSDORG00000006819	Rab5c	100	90.367	ENSATEG00000001937	rab5c	100	91.743	Anabas_testudineus
ENSDORG00000006819	Rab5c	94	98.529	ENSANAG00000025390	RAB5C	100	98.529	Aotus_nancymaae
ENSDORG00000006819	Rab5c	99	88.426	ENSACLG00000002706	rab5c	98	91.204	Astatotilapia_calliptera
ENSDORG00000006819	Rab5c	95	90.431	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSDORG00000006819	Rab5c	99	90.323	ENSAMXG00000043717	rab5c	98	92.166	Astyanax_mexicanus
ENSDORG00000006819	Rab5c	95	89.423	ENSAMXG00000037267	-	99	91.827	Astyanax_mexicanus
ENSDORG00000006819	Rab5c	100	98.611	ENSBTAG00000006982	RAB5C	100	98.611	Bos_taurus
ENSDORG00000006819	Rab5c	99	76.744	WBGene00004268	rab-5	99	76.744	Caenorhabditis_elegans
ENSDORG00000006819	Rab5c	100	98.148	ENSCAFG00000015629	RAB5C	100	98.148	Canis_familiaris
ENSDORG00000006819	Rab5c	100	98.148	ENSCAFG00020013537	RAB5C	100	98.148	Canis_lupus_dingo
ENSDORG00000006819	Rab5c	100	98.611	ENSCHIG00000012960	RAB5C	100	98.611	Capra_hircus
ENSDORG00000006819	Rab5c	100	99.074	ENSTSYG00000030531	RAB5C	100	99.074	Carlito_syrichta
ENSDORG00000006819	Rab5c	100	98.148	ENSCCAG00000025940	RAB5C	100	98.148	Cebus_capucinus
ENSDORG00000006819	Rab5c	100	98.611	ENSCATG00000040873	RAB5C	100	98.611	Cercocebus_atys
ENSDORG00000006819	Rab5c	100	97.685	ENSCLAG00000016650	RAB5C	100	97.685	Chinchilla_lanigera
ENSDORG00000006819	Rab5c	82	98.315	ENSCHOG00000009886	RAB5C	100	98.315	Choloepus_hoffmanni
ENSDORG00000006819	Rab5c	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSDORG00000006819	Rab5c	99	75.455	ENSCSAVG00000000613	-	99	83.951	Ciona_savignyi
ENSDORG00000006819	Rab5c	100	97.685	ENSCGRG00001014226	Rab5c	100	97.685	Cricetulus_griseus_chok1gshd
ENSDORG00000006819	Rab5c	100	97.685	ENSCGRG00000007534	Rab5c	100	97.685	Cricetulus_griseus_crigri
ENSDORG00000006819	Rab5c	99	91.667	ENSCSEG00000017024	rab5c	98	91.667	Cynoglossus_semilaevis
ENSDORG00000006819	Rab5c	99	89.815	ENSCVAG00000009550	rab5c	98	91.667	Cyprinodon_variegatus
ENSDORG00000006819	Rab5c	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSDORG00000006819	Rab5c	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSDORG00000006819	Rab5c	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSDORG00000006819	Rab5c	100	98.611	ENSEASG00005009281	RAB5C	100	98.611	Equus_asinus_asinus
ENSDORG00000006819	Rab5c	100	99.074	ENSECAG00000025054	RAB5C	100	99.074	Equus_caballus
ENSDORG00000006819	Rab5c	100	98.611	ENSEEUG00000002790	RAB5C	100	98.611	Erinaceus_europaeus
ENSDORG00000006819	Rab5c	99	88.426	ENSELUG00000018516	rab5c	99	90.741	Esox_lucius
ENSDORG00000006819	Rab5c	99	89.352	ENSELUG00000010439	-	98	89.352	Esox_lucius
ENSDORG00000006819	Rab5c	100	98.611	ENSFCAG00000002148	RAB5C	100	98.611	Felis_catus
ENSDORG00000006819	Rab5c	100	94.907	ENSFDAG00000021541	RAB5C	100	94.907	Fukomys_damarensis
ENSDORG00000006819	Rab5c	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSDORG00000006819	Rab5c	99	89.815	ENSFHEG00000012117	rab5c	98	91.667	Fundulus_heteroclitus
ENSDORG00000006819	Rab5c	99	88.426	ENSGMOG00000015096	rab5c	98	91.204	Gadus_morhua
ENSDORG00000006819	Rab5c	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSDORG00000006819	Rab5c	99	89.352	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSDORG00000006819	Rab5c	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSDORG00000006819	Rab5c	87	95.213	ENSGACG00000008659	rab5c	98	87.500	Gasterosteus_aculeatus
ENSDORG00000006819	Rab5c	100	98.611	ENSGGOG00000005472	RAB5C	100	98.611	Gorilla_gorilla
ENSDORG00000006819	Rab5c	99	88.426	ENSHBUG00000002014	rab5c	98	91.204	Haplochromis_burtoni
ENSDORG00000006819	Rab5c	95	90.431	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSDORG00000006819	Rab5c	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSDORG00000006819	Rab5c	99	90.323	ENSHCOG00000004662	rab5c	97	91.705	Hippocampus_comes
ENSDORG00000006819	Rab5c	96	81.991	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSDORG00000006819	Rab5c	95	88.462	ENSIPUG00000020082	rab5c	98	89.450	Ictalurus_punctatus
ENSDORG00000006819	Rab5c	100	97.222	ENSSTOG00000006620	RAB5C	100	97.222	Ictidomys_tridecemlineatus
ENSDORG00000006819	Rab5c	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSDORG00000006819	Rab5c	99	89.352	ENSKMAG00000020038	rab5c	98	91.667	Kryptolebias_marmoratus
ENSDORG00000006819	Rab5c	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSDORG00000006819	Rab5c	99	90.741	ENSLBEG00000004128	rab5c	98	92.593	Labrus_bergylta
ENSDORG00000006819	Rab5c	100	88.532	ENSLBEG00000010408	-	99	88.532	Labrus_bergylta
ENSDORG00000006819	Rab5c	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSDORG00000006819	Rab5c	100	98.611	ENSMFAG00000039627	RAB5C	100	98.611	Macaca_fascicularis
ENSDORG00000006819	Rab5c	100	98.611	ENSMNEG00000000355	RAB5C	100	98.611	Macaca_nemestrina
ENSDORG00000006819	Rab5c	99	88.940	ENSMAMG00000016207	-	99	88.940	Mastacembelus_armatus
ENSDORG00000006819	Rab5c	99	88.889	ENSMAMG00000022322	rab5c	98	91.204	Mastacembelus_armatus
ENSDORG00000006819	Rab5c	99	88.426	ENSMZEG00005022735	rab5c	98	91.204	Maylandia_zebra
ENSDORG00000006819	Rab5c	95	90.431	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSDORG00000006819	Rab5c	100	98.611	ENSMAUG00000015005	Rab5c	100	98.611	Mesocricetus_auratus
ENSDORG00000006819	Rab5c	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSDORG00000006819	Rab5c	100	97.685	ENSMOCG00000018531	-	100	97.685	Microtus_ochrogaster
ENSDORG00000006819	Rab5c	100	90.826	ENSMMOG00000020621	rab5c	99	90.826	Mola_mola
ENSDORG00000006819	Rab5c	97	84.834	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSDORG00000006819	Rab5c	99	88.073	ENSMALG00000022348	-	99	88.073	Monopterus_albus
ENSDORG00000006819	Rab5c	100	98.148	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.148	Mus_caroli
ENSDORG00000006819	Rab5c	100	98.148	ENSMUSG00000019173	Rab5c	100	98.148	Mus_musculus
ENSDORG00000006819	Rab5c	100	98.148	MGP_PahariEiJ_G0018314	Rab5c	100	98.148	Mus_pahari
ENSDORG00000006819	Rab5c	100	98.148	MGP_SPRETEiJ_G0018027	Rab5c	100	98.148	Mus_spretus
ENSDORG00000006819	Rab5c	100	98.611	ENSMPUG00000010554	RAB5C	100	98.611	Mustela_putorius_furo
ENSDORG00000006819	Rab5c	100	98.611	ENSNGAG00000010286	Rab5c	100	98.611	Nannospalax_galili
ENSDORG00000006819	Rab5c	99	89.352	ENSNBRG00000018165	rab5c	98	92.130	Neolamprologus_brichardi
ENSDORG00000006819	Rab5c	95	90.431	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSDORG00000006819	Rab5c	82	91.573	ENSOPRG00000008255	RAB5C	100	91.573	Ochotona_princeps
ENSDORG00000006819	Rab5c	100	96.759	ENSODEG00000017920	RAB5C	100	96.759	Octodon_degus
ENSDORG00000006819	Rab5c	99	89.352	ENSONIG00000001113	rab5c	98	92.130	Oreochromis_niloticus
ENSDORG00000006819	Rab5c	100	88.991	ENSORLG00000003882	rab5c	100	90.367	Oryzias_latipes
ENSDORG00000006819	Rab5c	100	89.908	ENSORLG00020008388	rab5c	100	89.908	Oryzias_latipes_hni
ENSDORG00000006819	Rab5c	100	88.991	ENSORLG00015021900	rab5c	100	90.367	Oryzias_latipes_hsok
ENSDORG00000006819	Rab5c	100	88.991	ENSOMEG00000023078	rab5c	100	90.367	Oryzias_melastigma
ENSDORG00000006819	Rab5c	100	99.537	ENSOGAG00000009456	RAB5C	100	99.537	Otolemur_garnettii
ENSDORG00000006819	Rab5c	100	98.611	ENSOARG00000018768	RAB5C	100	98.611	Ovis_aries
ENSDORG00000006819	Rab5c	100	98.611	ENSPPAG00000037206	RAB5C	100	98.611	Pan_paniscus
ENSDORG00000006819	Rab5c	100	98.611	ENSPPRG00000005745	RAB5C	100	98.611	Panthera_pardus
ENSDORG00000006819	Rab5c	100	98.611	ENSPTIG00000008177	RAB5C	100	98.611	Panthera_tigris_altaica
ENSDORG00000006819	Rab5c	100	98.611	ENSPTRG00000009194	RAB5C	100	98.611	Pan_troglodytes
ENSDORG00000006819	Rab5c	99	88.426	ENSPKIG00000020112	-	99	88.426	Paramormyrops_kingsleyae
ENSDORG00000006819	Rab5c	99	89.767	ENSPKIG00000001237	-	99	89.767	Paramormyrops_kingsleyae
ENSDORG00000006819	Rab5c	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSDORG00000006819	Rab5c	100	97.685	ENSPEMG00000017971	Rab5c	100	97.685	Peromyscus_maniculatus_bairdii
ENSDORG00000006819	Rab5c	99	78.037	ENSPMAG00000007867	rab5c	99	78.037	Petromyzon_marinus
ENSDORG00000006819	Rab5c	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSDORG00000006819	Rab5c	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSDORG00000006819	Rab5c	100	96.759	ENSPCIG00000020225	-	100	96.759	Phascolarctos_cinereus
ENSDORG00000006819	Rab5c	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSDORG00000006819	Rab5c	99	89.352	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSDORG00000006819	Rab5c	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSDORG00000006819	Rab5c	99	89.352	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSDORG00000006819	Rab5c	99	89.352	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSDORG00000006819	Rab5c	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSDORG00000006819	Rab5c	100	98.611	ENSPPYG00000008398	RAB5C	100	98.611	Pongo_abelii
ENSDORG00000006819	Rab5c	100	97.685	ENSPCAG00000016412	RAB5C	100	97.685	Procavia_capensis
ENSDORG00000006819	Rab5c	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSDORG00000006819	Rab5c	100	99.074	ENSPVAG00000003867	RAB5C	100	99.074	Pteropus_vampyrus
ENSDORG00000006819	Rab5c	95	90.431	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSDORG00000006819	Rab5c	99	88.426	ENSPNYG00000010615	rab5c	98	91.204	Pundamilia_nyererei
ENSDORG00000006819	Rab5c	99	91.705	ENSPNAG00000028138	rab5c	98	91.705	Pygocentrus_nattereri
ENSDORG00000006819	Rab5c	96	87.619	ENSPNAG00000002218	-	99	89.573	Pygocentrus_nattereri
ENSDORG00000006819	Rab5c	100	98.611	ENSRNOG00000018568	Rab5c	100	98.611	Rattus_norvegicus
ENSDORG00000006819	Rab5c	100	98.611	ENSRBIG00000031376	RAB5C	100	98.611	Rhinopithecus_bieti
ENSDORG00000006819	Rab5c	100	98.611	ENSRROG00000032895	RAB5C	100	98.611	Rhinopithecus_roxellana
ENSDORG00000006819	Rab5c	100	98.148	ENSSBOG00000032552	-	100	98.148	Saimiri_boliviensis_boliviensis
ENSDORG00000006819	Rab5c	100	97.222	ENSSHAG00000005267	-	100	97.222	Sarcophilus_harrisii
ENSDORG00000006819	Rab5c	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSDORG00000006819	Rab5c	96	92.788	ENSSMAG00000007323	rab5c	98	90.741	Scophthalmus_maximus
ENSDORG00000006819	Rab5c	99	92.130	ENSSDUG00000023008	rab5c	98	92.130	Seriola_dumerili
ENSDORG00000006819	Rab5c	99	91.667	ENSSLDG00000017771	rab5c	98	91.667	Seriola_lalandi_dorsalis
ENSDORG00000006819	Rab5c	100	95.370	ENSSPUG00000012950	-	100	95.370	Sphenodon_punctatus
ENSDORG00000006819	Rab5c	99	90.278	ENSSPAG00000006436	rab5c	98	93.056	Stegastes_partitus
ENSDORG00000006819	Rab5c	100	98.611	ENSSSCG00000032467	RAB5C	100	98.611	Sus_scrofa
ENSDORG00000006819	Rab5c	99	88.889	ENSTRUG00000015590	rab5c	98	91.204	Takifugu_rubripes
ENSDORG00000006819	Rab5c	96	91.388	ENSTNIG00000011711	rab5c	95	91.388	Tetraodon_nigroviridis
ENSDORG00000006819	Rab5c	100	98.611	ENSTBEG00000007092	RAB5C	100	98.611	Tupaia_belangeri
ENSDORG00000006819	Rab5c	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSDORG00000006819	Rab5c	100	98.611	ENSUAMG00000024343	RAB5C	100	98.611	Ursus_americanus
ENSDORG00000006819	Rab5c	100	98.611	ENSUMAG00000023270	RAB5C	100	98.611	Ursus_maritimus
ENSDORG00000006819	Rab5c	96	91.905	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSDORG00000006819	Rab5c	99	88.889	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSDORG00000006819	Rab5c	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSDORG00000006819	Rab5c	99	89.352	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus