EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000006821 (Gene tree)
Gene ID: 105999901
Gene Symbol: Zmat1
Alias: B930008K04Rik
Full Name: zinc finger matrin-type 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 32619 bases
Position: chrKN672549.1:140013-172631
Accession: 105999901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000020200	zf-met	PF12874.7	5.9e-11	1	3
ENSDORP00000020200	zf-met	PF12874.7	5.9e-11	2	3
ENSDORP00000020200	zf-met	PF12874.7	5.9e-11	3	3
ENSDORP00000006392	zf-met	PF12874.7	3e-09	1	2
ENSDORP00000006392	zf-met	PF12874.7	3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000036005	-	1917	XM_013035061	ENSDORP00000020200	638 (aa)	XP_012890515	UPI000BAD214F
ENSDORT00000006822	-	1815	-	ENSDORP00000006392	604 (aa)	-	UPI000BAD0E44

Gene Model

Click here to download ENSDORG00000006821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000006821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000006821	Zmat1	97	64.423	ENSG00000166432	ZMAT1	94	64.263	Homo_sapiens
ENSDORG00000006821	Zmat1	97	64.800	ENSAMEG00000004976	ZMAT1	100	64.640	Ailuropoda_melanoleuca
ENSDORG00000006821	Zmat1	97	62.179	ENSANAG00000028725	ZMAT1	100	63.894	Aotus_nancymaae
ENSDORG00000006821	Zmat1	100	57.584	ENSBTAG00000003601	ZMAT1	100	55.797	Bos_taurus
ENSDORG00000006821	Zmat1	97	61.859	ENSCJAG00000019724	ZMAT1	100	62.340	Callithrix_jacchus
ENSDORG00000006821	Zmat1	97	65.600	ENSCAFG00000017730	ZMAT1	100	65.440	Canis_familiaris
ENSDORG00000006821	Zmat1	77	66.525	ENSCAFG00020007319	ZMAT1	100	66.314	Canis_lupus_dingo
ENSDORG00000006821	Zmat1	77	62.236	ENSCHIG00000010507	ZMAT1	100	62.025	Capra_hircus
ENSDORG00000006821	Zmat1	97	61.280	ENSTSYG00000007330	ZMAT1	100	61.120	Carlito_syrichta
ENSDORG00000006821	Zmat1	97	56.431	ENSCPOG00000000581	ZMAT1	98	56.431	Cavia_porcellus
ENSDORG00000006821	Zmat1	97	61.699	ENSCCAG00000023924	ZMAT1	100	62.179	Cebus_capucinus
ENSDORG00000006821	Zmat1	100	63.158	ENSCATG00000000551	ZMAT1	98	63.360	Cercocebus_atys
ENSDORG00000006821	Zmat1	100	54.432	ENSCLAG00000004197	ZMAT1	100	54.432	Chinchilla_lanigera
ENSDORG00000006821	Zmat1	100	66.049	ENSCSAG00000009795	ZMAT1	90	66.512	Chlorocebus_sabaeus
ENSDORG00000006821	Zmat1	92	37.358	ENSCPBG00000001356	ZMAT1	96	35.714	Chrysemys_picta_bellii
ENSDORG00000006821	Zmat1	96	63.344	ENSCANG00000037194	ZMAT1	99	63.826	Colobus_angolensis_palliatus
ENSDORG00000006821	Zmat1	100	58.050	ENSCGRG00001023697	Zmat1	100	57.895	Cricetulus_griseus_chok1gshd
ENSDORG00000006821	Zmat1	97	56.960	ENSCGRG00000001964	Zmat1	99	56.800	Cricetulus_griseus_crigri
ENSDORG00000006821	Zmat1	77	48.554	ENSDNOG00000044924	-	99	49.174	Dasypus_novemcinctus
ENSDORG00000006821	Zmat1	91	59.391	ENSDNOG00000014852	-	100	59.391	Dasypus_novemcinctus
ENSDORG00000006821	Zmat1	97	47.588	ENSETEG00000020259	ZMAT1	100	47.588	Echinops_telfairi
ENSDORG00000006821	Zmat1	97	61.378	ENSEASG00005014185	ZMAT1	94	61.218	Equus_asinus_asinus
ENSDORG00000006821	Zmat1	100	66.254	ENSECAG00000013390	ZMAT1	100	67.360	Equus_caballus
ENSDORG00000006821	Zmat1	97	61.218	ENSFCAG00000023394	ZMAT1	100	61.218	Felis_catus
ENSDORG00000006821	Zmat1	99	56.964	ENSFDAG00000004063	ZMAT1	96	56.988	Fukomys_damarensis
ENSDORG00000006821	Zmat1	92	37.175	ENSGAGG00000002326	ZMAT1	100	35.211	Gopherus_agassizii
ENSDORG00000006821	Zmat1	97	64.263	ENSGGOG00000025784	ZMAT1	95	63.840	Gorilla_gorilla
ENSDORG00000006821	Zmat1	100	55.452	ENSHGLG00000002494	ZMAT1	100	55.452	Heterocephalus_glaber_female
ENSDORG00000006821	Zmat1	100	60.125	ENSHGLG00100004968	ZMAT1	100	60.125	Heterocephalus_glaber_male
ENSDORG00000006821	Zmat1	93	66.784	ENSSTOG00000011140	ZMAT1	100	66.257	Ictidomys_tridecemlineatus
ENSDORG00000006821	Zmat1	100	57.610	ENSJJAG00000020188	Zmat1	100	58.101	Jaculus_jaculus
ENSDORG00000006821	Zmat1	94	55.887	ENSLAFG00000015656	ZMAT1	100	55.556	Loxodonta_africana
ENSDORG00000006821	Zmat1	90	59.516	ENSMFAG00000042343	ZMAT1	95	59.516	Macaca_fascicularis
ENSDORG00000006821	Zmat1	100	66.667	ENSMMUG00000002151	ZMAT1	100	66.512	Macaca_mulatta
ENSDORG00000006821	Zmat1	100	66.204	ENSMNEG00000036310	ZMAT1	96	63.535	Macaca_nemestrina
ENSDORG00000006821	Zmat1	97	63.376	ENSMLEG00000005031	ZMAT1	96	63.217	Mandrillus_leucophaeus
ENSDORG00000006821	Zmat1	100	57.276	ENSMAUG00000002941	Zmat1	100	57.121	Mesocricetus_auratus
ENSDORG00000006821	Zmat1	96	65.008	ENSMICG00000003313	ZMAT1	99	64.848	Microcebus_murinus
ENSDORG00000006821	Zmat1	100	57.121	ENSMOCG00000000169	Zmat1	100	56.502	Microtus_ochrogaster
ENSDORG00000006821	Zmat1	100	55.556	ENSMUSG00000052676	Zmat1	100	55.401	Mus_musculus
ENSDORG00000006821	Zmat1	100	55.247	MGP_PahariEiJ_G0031943	Zmat1	100	55.093	Mus_pahari
ENSDORG00000006821	Zmat1	100	55.316	MGP_SPRETEiJ_G0034567	Zmat1	100	55.162	Mus_spretus
ENSDORG00000006821	Zmat1	97	56.304	ENSMPUG00000002130	ZMAT1	100	56.160	Mustela_putorius_furo
ENSDORG00000006821	Zmat1	97	59.069	ENSMLUG00000004417	ZMAT1	100	60.514	Myotis_lucifugus
ENSDORG00000006821	Zmat1	100	58.987	ENSNGAG00000006608	Zmat1	100	59.314	Nannospalax_galili
ENSDORG00000006821	Zmat1	97	59.711	ENSNLEG00000030520	ZMAT1	94	60.835	Nomascus_leucogenys
ENSDORG00000006821	Zmat1	66	50.493	ENSOPRG00000009950	-	99	50.493	Ochotona_princeps
ENSDORG00000006821	Zmat1	90	51.455	ENSOCUG00000004164	ZMAT1	99	51.818	Oryctolagus_cuniculus
ENSDORG00000006821	Zmat1	97	64.000	ENSOGAG00000033601	ZMAT1	100	63.840	Otolemur_garnettii
ENSDORG00000006821	Zmat1	97	61.182	ENSOARG00000001897	ZMAT1	100	61.022	Ovis_aries
ENSDORG00000006821	Zmat1	97	64.583	ENSPPAG00000039554	ZMAT1	95	64.274	Pan_paniscus
ENSDORG00000006821	Zmat1	97	61.378	ENSPPRG00000005258	ZMAT1	100	61.378	Panthera_pardus
ENSDORG00000006821	Zmat1	97	61.378	ENSPTIG00000019057	ZMAT1	100	61.378	Panthera_tigris_altaica
ENSDORG00000006821	Zmat1	100	67.233	ENSPTRG00000041840	ZMAT1	95	64.115	Pan_troglodytes
ENSDORG00000006821	Zmat1	100	60.742	ENSPEMG00000009944	Zmat1	100	60.587	Peromyscus_maniculatus_bairdii
ENSDORG00000006821	Zmat1	97	60.897	ENSPPYG00000020561	ZMAT1	93	60.737	Pongo_abelii
ENSDORG00000006821	Zmat1	96	53.065	ENSPCAG00000010283	ZMAT1	99	52.742	Procavia_capensis
ENSDORG00000006821	Zmat1	96	64.744	ENSPCOG00000021386	ZMAT1	99	64.583	Propithecus_coquereli
ENSDORG00000006821	Zmat1	96	62.480	ENSPVAG00000013206	ZMAT1	99	62.480	Pteropus_vampyrus
ENSDORG00000006821	Zmat1	100	55.728	ENSRNOG00000024135	Zmat1	100	55.573	Rattus_norvegicus
ENSDORG00000006821	Zmat1	97	62.360	ENSRBIG00000034121	ZMAT1	95	62.201	Rhinopithecus_bieti
ENSDORG00000006821	Zmat1	97	63.680	ENSRROG00000036747	ZMAT1	94	63.520	Rhinopithecus_roxellana
ENSDORG00000006821	Zmat1	97	62.821	ENSSBOG00000029970	ZMAT1	100	64.559	Saimiri_boliviensis_boliviensis
ENSDORG00000006821	Zmat1	93	39.147	ENSSHAG00000011087	-	100	39.313	Sarcophilus_harrisii
ENSDORG00000006821	Zmat1	62	48.889	ENSSARG00000003063	-	63	48.889	Sorex_araneus
ENSDORG00000006821	Zmat1	86	50.794	ENSSPUG00000004951	ZMAT1	92	38.650	Sphenodon_punctatus
ENSDORG00000006821	Zmat1	97	66.132	ENSSSCG00000012512	ZMAT1	100	64.819	Sus_scrofa
ENSDORG00000006821	Zmat1	91	60.102	ENSTBEG00000012967	ZMAT1	100	60.102	Tupaia_belangeri
ENSDORG00000006821	Zmat1	97	63.301	ENSTTRG00000016662	ZMAT1	100	63.622	Tursiops_truncatus
ENSDORG00000006821	Zmat1	77	66.314	ENSUAMG00000015209	ZMAT1	100	66.102	Ursus_americanus
ENSDORG00000006821	Zmat1	77	66.314	ENSUMAG00000000627	ZMAT1	100	66.102	Ursus_maritimus
ENSDORG00000006821	Zmat1	97	64.744	ENSVPAG00000006267	ZMAT1	100	64.744	Vicugna_pacos
ENSDORG00000006821	Zmat1	100	68.673	ENSVVUG00000005342	ZMAT1	90	68.519	Vulpes_vulpes
ENSDORG00000006821	Zmat1	53	33.811	ENSXETG00000001949	krcc1	99	34.211	Xenopus_tropicalis