EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDORG00000007103 (Gene tree)
Gene ID
105995988
Gene Symbol
Rbms1
Alias
-
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Minus strand
Length
225725 bases
Position
chrKN672351.1:12112137-12337861
Accession
105995988
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000023370RRM_1PF00076.224e-3312
ENSDORP00000023370RRM_1PF00076.224e-3322
ENSDORP00000006656RRM_1PF00076.224.6e-3312
ENSDORP00000006656RRM_1PF00076.224.6e-3322
ENSDORP00000019399RRM_1PF00076.224.8e-3312
ENSDORP00000019399RRM_1PF00076.224.8e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000030376-1421XM_013029956ENSDORP00000023370386 (aa)XP_012885410UPI000BAD1854
ENSDORT00000007101-1197-ENSDORP00000006656398 (aa)-UPI000BACF82E
ENSDORT00000024801-1212XM_013029918ENSDORP00000019399403 (aa)XP_012885372A0A1S3GAY1
Gene Model
Click here to download ENSDORG00000007103's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000007103's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDORG00000007103Rbms15339.474ENSDORG00000006455Celf25139.474
ENSDORG00000007103Rbms110070.686ENSDORG00000007220Rbms39572.886
ENSDORG00000007103Rbms16133.871ENSDORG00000012729Elavl47834.375
ENSDORG00000007103Rbms15137.674ENSDORG00000010437Elavl26936.634
ENSDORG00000007103Rbms19561.308ENSDORG00000009231Rbms28861.944
ENSDORG00000007103Rbms15335.484ENSDORG00000002538Elavl36437.356
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000007103Rbms110098.030ENSG00000153250RBMS110099.213Homo_sapiens
ENSDORG00000007103Rbms19763.032ENSAPOG00000013761rbms1a8966.571Acanthochromis_polyacanthus
ENSDORG00000007103Rbms19574.255ENSAPOG00000024437-9775.641Acanthochromis_polyacanthus
ENSDORG00000007103Rbms110093.846ENSAMEG00000012661RBMS110097.396Ailuropoda_melanoleuca
ENSDORG00000007103Rbms19875.959ENSACIG00000021498RBMS19875.959Amphilophus_citrinellus
ENSDORG00000007103Rbms19457.300ENSACIG00000000113rbms1a8960.000Amphilophus_citrinellus
ENSDORG00000007103Rbms19763.298ENSAOCG00000010066rbms1a8966.957Amphiprion_ocellaris
ENSDORG00000007103Rbms19777.378ENSAOCG00000014482-9777.378Amphiprion_ocellaris
ENSDORG00000007103Rbms19777.121ENSAPEG00000018371-9777.121Amphiprion_percula
ENSDORG00000007103Rbms19763.298ENSAPEG00000023563rbms1a8966.957Amphiprion_percula
ENSDORG00000007103Rbms19762.766ENSATEG00000015450rbms1a8966.282Anabas_testudineus
ENSDORG00000007103Rbms19476.330ENSATEG00000018573RBMS18977.557Anabas_testudineus
ENSDORG00000007103Rbms19692.126ENSAPLG00000007282RBMS19792.670Anas_platyrhynchos
ENSDORG00000007103Rbms19791.538ENSACAG00000011984RBMS18189.744Anolis_carolinensis
ENSDORG00000007103Rbms18793.195ENSANAG00000024424RBMS110098.758Aotus_nancymaae
ENSDORG00000007103Rbms110072.751ENSACLG00000013048RBMS19675.654Astatotilapia_calliptera
ENSDORG00000007103Rbms19463.158ENSACLG00000021512rbms1a9066.377Astatotilapia_calliptera
ENSDORG00000007103Rbms110074.872ENSAMXG00000009969RBMS110073.529Astyanax_mexicanus
ENSDORG00000007103Rbms19570.380ENSAMXG00000002146rbms1a8874.432Astyanax_mexicanus
ENSDORG00000007103Rbms110097.686ENSBTAG00000005180RBMS110094.076Bos_taurus
ENSDORG00000007103Rbms110091.710ENSCJAG00000012871-9995.442Callithrix_jacchus
ENSDORG00000007103Rbms110097.783ENSCJAG00000014861-10097.783Callithrix_jacchus
ENSDORG00000007103Rbms19988.220ENSCJAG00000022465-9891.557Callithrix_jacchus
ENSDORG00000007103Rbms110099.482ENSCAFG00000009922RBMS19698.196Canis_familiaris
ENSDORG00000007103Rbms110099.482ENSCAFG00020006120RBMS110099.007Canis_lupus_dingo
ENSDORG00000007103Rbms110098.511ENSCHIG00000023380RBMS110098.511Capra_hircus
ENSDORG00000007103Rbms110098.276ENSTSYG00000005584RBMS110099.189Carlito_syrichta
ENSDORG00000007103Rbms110099.223ENSCPOG00000012310RBMS110099.007Cavia_porcellus
ENSDORG00000007103Rbms110097.783ENSCCAG00000033841RBMS110097.927Cebus_capucinus
ENSDORG00000007103Rbms110099.223ENSCATG00000043032RBMS110099.223Cercocebus_atys
ENSDORG00000007103Rbms110099.256ENSCLAG00000003031RBMS110099.256Chinchilla_lanigera
ENSDORG00000007103Rbms110098.276ENSCSAG00000015687RBMS110098.276Chlorocebus_sabaeus
ENSDORG00000007103Rbms15497.015ENSCHOG00000001579RBMS17397.015Choloepus_hoffmanni
ENSDORG00000007103Rbms110092.857ENSCPBG00000026455RBMS110092.857Chrysemys_picta_bellii
ENSDORG00000007103Rbms110098.276ENSCANG00000042152RBMS110099.189Colobus_angolensis_palliatus
ENSDORG00000007103Rbms110098.187ENSCGRG00001022833Rbms110098.015Cricetulus_griseus_chok1gshd
ENSDORG00000007103Rbms110098.187ENSCGRG00000008824Rbms110098.015Cricetulus_griseus_crigri
ENSDORG00000007103Rbms110070.844ENSCSEG00000010652RBMS19474.148Cynoglossus_semilaevis
ENSDORG00000007103Rbms19760.638ENSCSEG00000000889rbms1a9063.977Cynoglossus_semilaevis
ENSDORG00000007103Rbms19762.500ENSCVAG00000014698rbms1a8965.698Cyprinodon_variegatus
ENSDORG00000007103Rbms110071.208ENSCVAG00000002027RBMS19676.136Cyprinodon_variegatus
ENSDORG00000007103Rbms19569.837ENSDARG00000074023rbms1a8773.864Danio_rerio
ENSDORG00000007103Rbms110097.943ENSDNOG00000040691RBMS110097.943Dasypus_novemcinctus
ENSDORG00000007103Rbms19686.614ENSETEG00000012135RBMS110086.614Echinops_telfairi
ENSDORG00000007103Rbms110097.943ENSEASG00005023132RBMS110094.076Equus_asinus_asinus
ENSDORG00000007103Rbms110098.705ENSECAG00000019894RBMS110097.783Equus_caballus
ENSDORG00000007103Rbms17999.029ENSEEUG00000005628RBMS17999.029Erinaceus_europaeus
ENSDORG00000007103Rbms19670.649ENSELUG00000019328RBMS19570.649Esox_lucius
ENSDORG00000007103Rbms19964.156ENSELUG00000018923rbms1a9469.143Esox_lucius
ENSDORG00000007103Rbms110098.030ENSFCAG00000012524RBMS110098.919Felis_catus
ENSDORG00000007103Rbms19588.767ENSFALG00000004440RBMS19492.837Ficedula_albicollis
ENSDORG00000007103Rbms110099.504ENSFDAG00000015692RBMS110099.504Fukomys_damarensis
ENSDORG00000007103Rbms19773.247ENSFHEG00000000720RBMS18975.568Fundulus_heteroclitus
ENSDORG00000007103Rbms19762.766ENSFHEG00000005662rbms1a7982.166Fundulus_heteroclitus
ENSDORG00000007103Rbms19063.793ENSGMOG00000000525rbms1a9963.056Gadus_morhua
ENSDORG00000007103Rbms19791.237ENSGALG00000011132RBMS19791.003Gallus_gallus
ENSDORG00000007103Rbms19473.177ENSGAFG00000007708RBMS18875.284Gambusia_affinis
ENSDORG00000007103Rbms19762.500ENSGAFG00000011633rbms1a9565.994Gambusia_affinis
ENSDORG00000007103Rbms19572.900ENSGACG00000005671RBMS18976.989Gasterosteus_aculeatus
ENSDORG00000007103Rbms19762.865ENSGACG00000015174rbms1a9167.183Gasterosteus_aculeatus
ENSDORG00000007103Rbms110092.611ENSGAGG00000007866RBMS110092.611Gopherus_agassizii
ENSDORG00000007103Rbms19696.335ENSGGOG00000043756-9596.335Gorilla_gorilla
ENSDORG00000007103Rbms110098.964ENSGGOG00000001264RBMS110098.964Gorilla_gorilla
ENSDORG00000007103Rbms19463.158ENSHBUG00000004802rbms1a9066.377Haplochromis_burtoni
ENSDORG00000007103Rbms19078.431ENSHBUG00000004516RBMS19478.431Haplochromis_burtoni
ENSDORG00000007103Rbms110099.223ENSHGLG00000010387RBMS110098.759Heterocephalus_glaber_female
ENSDORG00000007103Rbms110099.223ENSHGLG00100014105RBMS19899.223Heterocephalus_glaber_male
ENSDORG00000007103Rbms19475.266ENSHCOG00000016668RBMS19475.266Hippocampus_comes
ENSDORG00000007103Rbms19761.436ENSHCOG00000020097rbms1a8964.841Hippocampus_comes
ENSDORG00000007103Rbms19570.380ENSIPUG00000010131RBMS18874.432Ictalurus_punctatus
ENSDORG00000007103Rbms110077.396ENSIPUG00000014677RBMS110075.430Ictalurus_punctatus
ENSDORG00000007103Rbms110099.256ENSSTOG00000012501RBMS110099.256Ictidomys_tridecemlineatus
ENSDORG00000007103Rbms110098.964ENSJJAG00000016543Rbms110098.964Jaculus_jaculus
ENSDORG00000007103Rbms19761.538ENSKMAG00000011839-8964.928Kryptolebias_marmoratus
ENSDORG00000007103Rbms19876.982ENSKMAG00000013911RBMS19876.982Kryptolebias_marmoratus
ENSDORG00000007103Rbms19477.660ENSLBEG00000005787RBMS19477.660Labrus_bergylta
ENSDORG00000007103Rbms19763.032ENSLBEG00000025962rbms1a8966.571Labrus_bergylta
ENSDORG00000007103Rbms110078.772ENSLACG00000004324RBMS19680.153Latimeria_chalumnae
ENSDORG00000007103Rbms19783.548ENSLOCG00000008622rbms1a9783.548Lepisosteus_oculatus
ENSDORG00000007103Rbms110094.301ENSLAFG00000017217RBMS110098.153Loxodonta_africana
ENSDORG00000007103Rbms110098.276ENSMFAG00000000274RBMS110099.189Macaca_fascicularis
ENSDORG00000007103Rbms110099.223ENSMMUG00000016825RBMS110098.276Macaca_mulatta
ENSDORG00000007103Rbms110098.276ENSMNEG00000039425RBMS110099.189Macaca_nemestrina
ENSDORG00000007103Rbms19798.450ENSMLEG00000031517RBMS110098.919Mandrillus_leucophaeus
ENSDORG00000007103Rbms19760.904ENSMAMG00000005018rbms1a8964.265Mastacembelus_armatus
ENSDORG00000007103Rbms19972.362ENSMAMG00000003159-9276.353Mastacembelus_armatus
ENSDORG00000007103Rbms18874.128ENSMZEG00005007313RBMS19178.593Maylandia_zebra
ENSDORG00000007103Rbms19463.158ENSMZEG00005005661rbms1a9066.377Maylandia_zebra
ENSDORG00000007103Rbms19588.043ENSMGAG00000011054RBMS110091.793Meleagris_gallopavo
ENSDORG00000007103Rbms110097.668ENSMAUG00000008550Rbms110097.519Mesocricetus_auratus
ENSDORG00000007103Rbms110098.705ENSMICG00000008325RBMS110098.705Microcebus_murinus
ENSDORG00000007103Rbms110097.519ENSMOCG00000022617Rbms110097.519Microtus_ochrogaster
ENSDORG00000007103Rbms19477.333ENSMMOG00000003707RBMS19676.042Mola_mola
ENSDORG00000007103Rbms19459.945ENSMMOG00000018249rbms1a8963.006Mola_mola
ENSDORG00000007103Rbms110094.045ENSMODG00000005250RBMS110094.045Monodelphis_domestica
ENSDORG00000007103Rbms19074.644ENSMALG00000015715-8976.504Monopterus_albus
ENSDORG00000007103Rbms19762.234ENSMALG00000014235rbms1a8965.706Monopterus_albus
ENSDORG00000007103Rbms110097.150MGP_CAROLIEiJ_G0023586Rbms110097.150Mus_caroli
ENSDORG00000007103Rbms110097.150ENSMUSG00000026970Rbms110097.150Mus_musculus
ENSDORG00000007103Rbms110096.891MGP_PahariEiJ_G0025037Rbms110096.526Mus_pahari
ENSDORG00000007103Rbms110097.409MGP_SPRETEiJ_G0024508Rbms110097.409Mus_spretus
ENSDORG00000007103Rbms110098.964ENSMPUG00000000539RBMS110094.988Mustela_putorius_furo
ENSDORG00000007103Rbms110097.680ENSMLUG00000008762RBMS19397.680Myotis_lucifugus
ENSDORG00000007103Rbms110098.705ENSNGAG00000013636Rbms110098.511Nannospalax_galili
ENSDORG00000007103Rbms18264.873ENSNBRG00000020217rbms1a8568.667Neolamprologus_brichardi
ENSDORG00000007103Rbms19569.377ENSNBRG00000015151RBMS19473.295Neolamprologus_brichardi
ENSDORG00000007103Rbms110098.964ENSNLEG00000001667RBMS110098.919Nomascus_leucogenys
ENSDORG00000007103Rbms18775.740ENSMEUG00000000746RBMS110080.435Notamacropus_eugenii
ENSDORG00000007103Rbms110091.133ENSOPRG00000012431RBMS110091.133Ochotona_princeps
ENSDORG00000007103Rbms110099.256ENSODEG00000013934RBMS110099.256Octodon_degus
ENSDORG00000007103Rbms19676.440ENSONIG00000008934RBMS19676.440Oreochromis_niloticus
ENSDORG00000007103Rbms19463.260ENSONIG00000003329rbms1a8866.377Oreochromis_niloticus
ENSDORG00000007103Rbms15557.261ENSOANG00000004477-9958.264Ornithorhynchus_anatinus
ENSDORG00000007103Rbms19693.490ENSOANG00000006166RBMS19793.490Ornithorhynchus_anatinus
ENSDORG00000007103Rbms110094.041ENSOCUG00000017365RBMS18997.889Oryctolagus_cuniculus
ENSDORG00000007103Rbms19074.302ENSORLG00000016818RBMS18975.071Oryzias_latipes
ENSDORG00000007103Rbms19760.638ENSORLG00000003917rbms1a9064.058Oryzias_latipes
ENSDORG00000007103Rbms19760.372ENSORLG00020018663rbms1a9063.768Oryzias_latipes_hni
ENSDORG00000007103Rbms19074.022ENSORLG00020022335RBMS18974.788Oryzias_latipes_hni
ENSDORG00000007103Rbms19074.581ENSORLG00015018208RBMS18975.354Oryzias_latipes_hsok
ENSDORG00000007103Rbms19760.638ENSORLG00015016556rbms1a9064.058Oryzias_latipes_hsok
ENSDORG00000007103Rbms19174.238ENSOMEG00000002394RBMS19472.487Oryzias_melastigma
ENSDORG00000007103Rbms110093.095ENSOGAG00000002900RBMS110097.867Otolemur_garnettii
ENSDORG00000007103Rbms110098.511ENSOARG00000006870RBMS110098.511Ovis_aries
ENSDORG00000007103Rbms19494.947ENSPPAG00000036520-9994.947Pan_paniscus
ENSDORG00000007103Rbms110098.964ENSPPAG00000040083RBMS110098.953Pan_paniscus
ENSDORG00000007103Rbms110098.030ENSPPRG00000005040RBMS110098.919Panthera_pardus
ENSDORG00000007103Rbms19698.950ENSPTIG00000021240RBMS110098.919Panthera_tigris_altaica
ENSDORG00000007103Rbms110098.964ENSPTRG00000052304RBMS110098.953Pan_troglodytes
ENSDORG00000007103Rbms19696.084ENSPTRG00000039358-9996.073Pan_troglodytes
ENSDORG00000007103Rbms110099.007ENSPANG00000001383RBMS110099.007Papio_anubis
ENSDORG00000007103Rbms19574.457ENSPKIG00000012818rbms1a10074.074Paramormyrops_kingsleyae
ENSDORG00000007103Rbms110077.751ENSPKIG00000001498rbms1a10075.795Paramormyrops_kingsleyae
ENSDORG00000007103Rbms110093.797ENSPSIG00000010240RBMS110093.797Pelodiscus_sinensis
ENSDORG00000007103Rbms19458.564ENSPMGG00000004341rbms1a9061.449Periophthalmus_magnuspinnatus
ENSDORG00000007103Rbms18973.487ENSPMGG00000006310RBMS19569.034Periophthalmus_magnuspinnatus
ENSDORG00000007103Rbms110098.263ENSPEMG00000009449Rbms110098.263Peromyscus_maniculatus_bairdii
ENSDORG00000007103Rbms110094.045ENSPCIG00000018405RBMS110094.045Phascolarctos_cinereus
ENSDORG00000007103Rbms19872.180ENSPFOG00000017483RBMS19476.064Poecilia_formosa
ENSDORG00000007103Rbms19762.500ENSPFOG00000016116rbms1a8965.994Poecilia_formosa
ENSDORG00000007103Rbms19571.739ENSPLAG00000000920RBMS18875.568Poecilia_latipinna
ENSDORG00000007103Rbms19762.500ENSPLAG00000013864rbms1a8965.994Poecilia_latipinna
ENSDORG00000007103Rbms19476.064ENSPMEG00000015838RBMS19476.064Poecilia_mexicana
ENSDORG00000007103Rbms19762.500ENSPMEG00000016185rbms1a8965.994Poecilia_mexicana
ENSDORG00000007103Rbms19762.500ENSPREG00000020161rbms1a8965.994Poecilia_reticulata
ENSDORG00000007103Rbms19475.798ENSPREG00000008146RBMS19475.798Poecilia_reticulata
ENSDORG00000007103Rbms110097.943ENSPPYG00000012879-10094.076Pongo_abelii
ENSDORG00000007103Rbms110091.133ENSPCAG00000009673RBMS110091.133Procavia_capensis
ENSDORG00000007103Rbms110098.030ENSPCOG00000027294RBMS110098.919Propithecus_coquereli
ENSDORG00000007103Rbms18899.539ENSPVAG00000010429RBMS18799.539Pteropus_vampyrus
ENSDORG00000007103Rbms19676.178ENSPNYG00000002643RBMS19676.178Pundamilia_nyererei
ENSDORG00000007103Rbms110075.897ENSPNAG00000023479RBMS18880.398Pygocentrus_nattereri
ENSDORG00000007103Rbms19570.109ENSPNAG00000010225rbms1a8874.148Pygocentrus_nattereri
ENSDORG00000007103Rbms110097.270ENSRNOG00000008482Rbms110097.270Rattus_norvegicus
ENSDORG00000007103Rbms110098.201ENSRBIG00000044262RBMS110098.030Rhinopithecus_bieti
ENSDORG00000007103Rbms110098.458ENSRROG00000043108RBMS19998.956Rhinopithecus_roxellana
ENSDORG00000007103Rbms110097.943ENSSBOG00000034705RBMS110098.660Saimiri_boliviensis_boliviensis
ENSDORG00000007103Rbms110094.293ENSSHAG00000012271RBMS110094.293Sarcophilus_harrisii
ENSDORG00000007103Rbms19575.272ENSSFOG00015014493rbms1a9579.261Scleropages_formosus
ENSDORG00000007103Rbms19979.950ENSSFOG00015022929rbms19978.960Scleropages_formosus
ENSDORG00000007103Rbms19462.881ENSSMAG00000012722rbms1a9565.994Scophthalmus_maximus
ENSDORG00000007103Rbms19572.900ENSSMAG00000012152RBMS18779.511Scophthalmus_maximus
ENSDORG00000007103Rbms19478.191ENSSDUG00000018803RBMS19478.191Seriola_dumerili
ENSDORG00000007103Rbms19763.032ENSSDUG00000020602rbms1a9566.571Seriola_dumerili
ENSDORG00000007103Rbms19763.032ENSSLDG00000009495rbms1a8966.571Seriola_lalandi_dorsalis
ENSDORG00000007103Rbms19477.926ENSSLDG00000016556RBMS19477.926Seriola_lalandi_dorsalis
ENSDORG00000007103Rbms110068.473ENSSARG00000011085RBMS110068.473Sorex_araneus
ENSDORG00000007103Rbms19588.315ENSSPUG00000017163RBMS19493.182Sphenodon_punctatus
ENSDORG00000007103Rbms19478.989ENSSPAG00000000059RBMS19478.989Stegastes_partitus
ENSDORG00000007103Rbms19762.766ENSSPAG00000005371rbms1a8966.282Stegastes_partitus
ENSDORG00000007103Rbms110098.705ENSSSCG00000015888RBMS110094.749Sus_scrofa
ENSDORG00000007103Rbms110093.052ENSTGUG00000006606RBMS110093.052Taeniopygia_guttata
ENSDORG00000007103Rbms19571.545ENSTRUG00000005466-9672.539Takifugu_rubripes
ENSDORG00000007103Rbms19362.011ENSTRUG00000017155rbms1a8964.826Takifugu_rubripes
ENSDORG00000007103Rbms19560.490ENSTNIG00000009477rbms1a9963.303Tetraodon_nigroviridis
ENSDORG00000007103Rbms110071.208ENSTNIG00000016496RBMS19776.989Tetraodon_nigroviridis
ENSDORG00000007103Rbms110083.805ENSTBEG00000016156RBMS110087.402Tupaia_belangeri
ENSDORG00000007103Rbms19698.425ENSTTRG00000011058RBMS110098.425Tursiops_truncatus
ENSDORG00000007103Rbms110098.964ENSUAMG00000022331RBMS110098.511Ursus_americanus
ENSDORG00000007103Rbms110098.964ENSUMAG00000008605RBMS19997.668Ursus_maritimus
ENSDORG00000007103Rbms19496.063ENSVPAG00000002716RBMS110095.013Vicugna_pacos
ENSDORG00000007103Rbms110099.482ENSVVUG00000018682RBMS110099.482Vulpes_vulpes
ENSDORG00000007103Rbms19683.551ENSXETG00000016204rbms110082.768Xenopus_tropicalis
ENSDORG00000007103Rbms19759.309ENSXCOG00000001659rbms1a8962.609Xiphophorus_couchianus
ENSDORG00000007103Rbms19571.739ENSXCOG00000000211RBMS19575.568Xiphophorus_couchianus
ENSDORG00000007103Rbms19475.532ENSXMAG00000011405RBMS19475.532Xiphophorus_maculatus
ENSDORG00000007103Rbms19762.500ENSXMAG00000001802rbms1a8965.994Xiphophorus_maculatus

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