EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000007310 (Gene tree)
Gene ID: 105986342
Gene Symbol: Ddx50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 42561 bases
Position: chrKN672380.1:14735903-14778463
Accession: 105986342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000006854	GUCT	PF08152.12	6.2e-28	1	1
ENSDORP00000006854	ResIII	PF04851.15	3.1e-10	1	1
ENSDORP00000006854	DEAD	PF00270.29	1.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000007309	-	2544	XM_013017210	ENSDORP00000006854	737 (aa)	XP_012872664	A0A1S3F9D7

Gene Model

Click here to download ENSDORG00000007310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000007310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000007310	Ddx50	55	33.568	ENSDORG00000014137	Ddx27	52	33.412
ENSDORG00000007310	Ddx50	50	32.620	ENSDORG00000013028	-	86	32.620
ENSDORG00000007310	Ddx50	50	32.267	ENSDORG00000014225	Eif4a1	88	31.720
ENSDORG00000007310	Ddx50	50	34.447	ENSDORG00000011340	Ddx18	59	34.704
ENSDORG00000007310	Ddx50	87	58.706	ENSDORG00000002202	Ddx21	92	54.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000007310	Ddx50	100	97.286	ENSG00000107625	DDX50	100	97.286	Homo_sapiens
ENSDORG00000007310	Ddx50	93	96.047	ENSAMEG00000017992	DDX50	92	96.024	Ailuropoda_melanoleuca
ENSDORG00000007310	Ddx50	92	77.424	ENSANAG00000017785	-	91	77.424	Aotus_nancymaae
ENSDORG00000007310	Ddx50	100	96.201	ENSBTAG00000033413	DDX50	100	96.201	Bos_taurus
ENSDORG00000007310	Ddx50	100	97.286	ENSCJAG00000018844	DDX50	100	97.286	Callithrix_jacchus
ENSDORG00000007310	Ddx50	93	96.193	ENSCAFG00000013776	DDX50	99	96.171	Canis_familiaris
ENSDORG00000007310	Ddx50	93	96.193	ENSCAFG00020025977	DDX50	92	96.171	Canis_lupus_dingo
ENSDORG00000007310	Ddx50	100	95.658	ENSCHIG00000000285	DDX50	92	95.870	Capra_hircus
ENSDORG00000007310	Ddx50	100	96.608	ENSTSYG00000004192	DDX50	99	98.128	Carlito_syrichta
ENSDORG00000007310	Ddx50	88	78.483	ENSCAPG00000007230	-	87	78.462	Cavia_aperea
ENSDORG00000007310	Ddx50	91	95.401	ENSCPOG00000002131	-	92	95.428	Cavia_porcellus
ENSDORG00000007310	Ddx50	83	87.059	ENSCCAG00000030543	DDX50	90	87.230	Cebus_capucinus
ENSDORG00000007310	Ddx50	98	71.607	ENSCATG00000035153	-	89	88.715	Cercocebus_atys
ENSDORG00000007310	Ddx50	99	65.946	ENSCATG00000039259	-	89	67.107	Cercocebus_atys
ENSDORG00000007310	Ddx50	90	97.741	ENSCATG00000032463	DDX50	93	97.741	Cercocebus_atys
ENSDORG00000007310	Ddx50	100	96.744	ENSCLAG00000012957	-	100	96.744	Chinchilla_lanigera
ENSDORG00000007310	Ddx50	50	86.179	ENSCLAG00000001553	-	79	87.419	Chinchilla_lanigera
ENSDORG00000007310	Ddx50	97	69.944	ENSCLAG00000001938	-	91	70.904	Chinchilla_lanigera
ENSDORG00000007310	Ddx50	100	97.286	ENSCSAG00000007703	DDX50	100	97.286	Chlorocebus_sabaeus
ENSDORG00000007310	Ddx50	88	93.991	ENSCHOG00000000233	DDX50	97	93.991	Choloepus_hoffmanni
ENSDORG00000007310	Ddx50	100	83.446	ENSCANG00000036450	-	100	83.446	Colobus_angolensis_palliatus
ENSDORG00000007310	Ddx50	96	68.252	ENSCANG00000028077	-	91	67.789	Colobus_angolensis_palliatus
ENSDORG00000007310	Ddx50	86	71.609	ENSCANG00000018820	-	88	72.522	Colobus_angolensis_palliatus
ENSDORG00000007310	Ddx50	92	95.870	ENSCGRG00001020223	Ddx50	92	95.870	Cricetulus_griseus_chok1gshd
ENSDORG00000007310	Ddx50	92	96.000	ENSCGRG00000015884	Ddx50	92	95.870	Cricetulus_griseus_crigri
ENSDORG00000007310	Ddx50	88	89.352	ENSDNOG00000001675	DDX50	100	89.352	Dasypus_novemcinctus
ENSDORG00000007310	Ddx50	90	97.345	ENSETEG00000014069	DDX50	90	97.345	Echinops_telfairi
ENSDORG00000007310	Ddx50	100	96.472	ENSEASG00005015595	DDX50	99	96.472	Equus_asinus_asinus
ENSDORG00000007310	Ddx50	100	96.472	ENSECAG00000023044	DDX50	99	96.472	Equus_caballus
ENSDORG00000007310	Ddx50	86	96.860	ENSEEUG00000005782	DDX50	81	97.884	Erinaceus_europaeus
ENSDORG00000007310	Ddx50	100	96.883	ENSFCAG00000012678	DDX50	99	96.883	Felis_catus
ENSDORG00000007310	Ddx50	92	89.823	ENSFDAG00000016109	-	91	89.823	Fukomys_damarensis
ENSDORG00000007310	Ddx50	100	97.286	ENSGGOG00000010100	DDX50	100	97.286	Gorilla_gorilla
ENSDORG00000007310	Ddx50	52	70.312	ENSGGOG00000022568	-	90	78.882	Gorilla_gorilla
ENSDORG00000007310	Ddx50	51	80.952	ENSGGOG00000041063	-	82	83.699	Gorilla_gorilla
ENSDORG00000007310	Ddx50	92	95.280	ENSHGLG00000013466	DDX50	92	95.280	Heterocephalus_glaber_female
ENSDORG00000007310	Ddx50	92	95.280	ENSHGLG00100017191	DDX50	92	95.280	Heterocephalus_glaber_male
ENSDORG00000007310	Ddx50	82	86.702	ENSHGLG00100006568	-	92	86.702	Heterocephalus_glaber_male
ENSDORG00000007310	Ddx50	100	95.122	ENSSTOG00000021852	-	100	94.851	Ictidomys_tridecemlineatus
ENSDORG00000007310	Ddx50	100	72.740	ENSJJAG00000019626	-	91	73.383	Jaculus_jaculus
ENSDORG00000007310	Ddx50	100	94.437	ENSJJAG00000023928	-	92	94.395	Jaculus_jaculus
ENSDORG00000007310	Ddx50	92	96.165	ENSLAFG00000006186	DDX50	92	96.165	Loxodonta_africana
ENSDORG00000007310	Ddx50	100	97.286	ENSMFAG00000044067	DDX50	100	97.286	Macaca_fascicularis
ENSDORG00000007310	Ddx50	98	71.468	ENSMFAG00000045339	-	89	87.774	Macaca_fascicularis
ENSDORG00000007310	Ddx50	80	68.136	ENSMMUG00000045343	-	80	67.797	Macaca_mulatta
ENSDORG00000007310	Ddx50	100	97.286	ENSMMUG00000001006	DDX50	100	97.768	Macaca_mulatta
ENSDORG00000007310	Ddx50	98	72.552	ENSMNEG00000045530	-	89	89.028	Macaca_nemestrina
ENSDORG00000007310	Ddx50	92	90.265	ENSMNEG00000031664	DDX50	92	90.265	Macaca_nemestrina
ENSDORG00000007310	Ddx50	86	83.411	ENSMLEG00000041988	-	89	86.822	Mandrillus_leucophaeus
ENSDORG00000007310	Ddx50	92	95.280	ENSMLEG00000037313	DDX50	92	95.280	Mandrillus_leucophaeus
ENSDORG00000007310	Ddx50	56	94.673	ENSMAUG00000022192	Ddx50	100	94.673	Mesocricetus_auratus
ENSDORG00000007310	Ddx50	100	88.874	ENSMICG00000017539	DDX50	100	88.874	Microcebus_murinus
ENSDORG00000007310	Ddx50	92	95.441	ENSMOCG00000001676	Ddx50	92	95.441	Microtus_ochrogaster
ENSDORG00000007310	Ddx50	92	79.765	ENSMODG00000010741	DDX50	92	80.175	Monodelphis_domestica
ENSDORG00000007310	Ddx50	92	94.395	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.985	Mus_caroli
ENSDORG00000007310	Ddx50	92	94.838	ENSMUSG00000020076	Ddx50	92	95.280	Mus_musculus
ENSDORG00000007310	Ddx50	92	94.985	MGP_PahariEiJ_G0030805	Ddx50	92	95.428	Mus_pahari
ENSDORG00000007310	Ddx50	92	94.838	MGP_SPRETEiJ_G0016200	Ddx50	92	95.280	Mus_spretus
ENSDORG00000007310	Ddx50	88	95.370	ENSMPUG00000004589	DDX50	99	95.679	Mustela_putorius_furo
ENSDORG00000007310	Ddx50	92	94.100	ENSMLUG00000017590	DDX50	92	94.100	Myotis_lucifugus
ENSDORG00000007310	Ddx50	100	96.472	ENSNGAG00000004283	Ddx50	100	96.472	Nannospalax_galili
ENSDORG00000007310	Ddx50	88	66.870	ENSNLEG00000035506	-	88	77.259	Nomascus_leucogenys
ENSDORG00000007310	Ddx50	100	97.151	ENSNLEG00000011631	DDX50	100	97.151	Nomascus_leucogenys
ENSDORG00000007310	Ddx50	92	93.068	ENSOPRG00000001619	DDX50	92	93.658	Ochotona_princeps
ENSDORG00000007310	Ddx50	92	95.428	ENSODEG00000014597	-	92	95.870	Octodon_degus
ENSDORG00000007310	Ddx50	93	66.332	ENSOANG00000004776	DDX50	82	66.667	Ornithorhynchus_anatinus
ENSDORG00000007310	Ddx50	100	90.909	ENSOCUG00000002879	DDX50	95	94.838	Oryctolagus_cuniculus
ENSDORG00000007310	Ddx50	100	96.201	ENSOGAG00000001844	DDX50	100	96.201	Otolemur_garnettii
ENSDORG00000007310	Ddx50	100	95.658	ENSOARG00000005264	DDX50	92	95.870	Ovis_aries
ENSDORG00000007310	Ddx50	52	70.263	ENSPPAG00000026788	-	89	78.931	Pan_paniscus
ENSDORG00000007310	Ddx50	100	97.151	ENSPPAG00000040723	DDX50	100	97.151	Pan_paniscus
ENSDORG00000007310	Ddx50	100	96.883	ENSPPRG00000015826	DDX50	100	96.883	Panthera_pardus
ENSDORG00000007310	Ddx50	100	96.883	ENSPTIG00000008454	DDX50	100	96.883	Panthera_tigris_altaica
ENSDORG00000007310	Ddx50	100	97.151	ENSPTRG00000002562	DDX50	100	97.151	Pan_troglodytes
ENSDORG00000007310	Ddx50	52	70.263	ENSPTRG00000044913	-	99	71.316	Pan_troglodytes
ENSDORG00000007310	Ddx50	92	89.381	ENSPANG00000022143	-	92	89.381	Papio_anubis
ENSDORG00000007310	Ddx50	92	95.428	ENSPEMG00000020899	-	92	95.428	Peromyscus_maniculatus_bairdii
ENSDORG00000007310	Ddx50	98	75.962	ENSPCIG00000016036	DDX50	93	80.945	Phascolarctos_cinereus
ENSDORG00000007310	Ddx50	91	97.619	ENSPPYG00000002390	DDX50	100	97.619	Pongo_abelii
ENSDORG00000007310	Ddx50	84	81.818	ENSPCAG00000009692	DDX50	100	81.818	Procavia_capensis
ENSDORG00000007310	Ddx50	79	87.692	ENSPCOG00000012574	DDX50	90	88.136	Propithecus_coquereli
ENSDORG00000007310	Ddx50	86	93.664	ENSPVAG00000009519	DDX50	78	93.664	Pteropus_vampyrus
ENSDORG00000007310	Ddx50	92	94.248	ENSRNOG00000000396	Ddx50	98	97.594	Rattus_norvegicus
ENSDORG00000007310	Ddx50	99	66.441	ENSRBIG00000039673	-	90	65.786	Rhinopithecus_bieti
ENSDORG00000007310	Ddx50	87	95.334	ENSRBIG00000042841	-	98	97.079	Rhinopithecus_bieti
ENSDORG00000007310	Ddx50	99	67.667	ENSRBIG00000036573	-	92	67.656	Rhinopithecus_bieti
ENSDORG00000007310	Ddx50	100	97.015	ENSRROG00000032158	DDX50	100	97.325	Rhinopithecus_roxellana
ENSDORG00000007310	Ddx50	99	65.082	ENSRROG00000022853	-	91	64.549	Rhinopithecus_roxellana
ENSDORG00000007310	Ddx50	52	69.974	ENSRROG00000031940	-	87	74.154	Rhinopithecus_roxellana
ENSDORG00000007310	Ddx50	92	85.546	ENSSBOG00000014441	DDX50	99	86.984	Saimiri_boliviensis_boliviensis
ENSDORG00000007310	Ddx50	88	80.851	ENSSHAG00000005690	DDX50	91	80.909	Sarcophilus_harrisii
ENSDORG00000007310	Ddx50	79	67.672	ENSSHAG00000005334	-	79	67.384	Sarcophilus_harrisii
ENSDORG00000007310	Ddx50	100	79.240	ENSSARG00000013553	DDX50	88	86.977	Sorex_araneus
ENSDORG00000007310	Ddx50	100	95.251	ENSSSCG00000010246	DDX50	92	95.280	Sus_scrofa
ENSDORG00000007310	Ddx50	96	74.121	ENSTBEG00000001085	DDX50	92	73.599	Tupaia_belangeri
ENSDORG00000007310	Ddx50	100	90.095	ENSTTRG00000012408	DDX50	99	90.095	Tursiops_truncatus
ENSDORG00000007310	Ddx50	93	96.340	ENSUAMG00000010976	DDX50	99	98.464	Ursus_americanus
ENSDORG00000007310	Ddx50	93	96.340	ENSUMAG00000007726	DDX50	92	96.318	Ursus_maritimus
ENSDORG00000007310	Ddx50	92	95.280	ENSVPAG00000000626	DDX50	92	95.280	Vicugna_pacos
ENSDORG00000007310	Ddx50	82	90.879	ENSVVUG00000020366	DDX50	98	97.861	Vulpes_vulpes