EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000007579 (Gene tree)
Gene ID: 105999129
Gene Symbol: Lsm10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 3171 bases
Position: chrKN672527.1:1254880-1258050
Accession: 105999129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000007109	LSM	PF01423.22	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000007579	-	717	XM_013034062	ENSDORP00000007109	123 (aa)	XP_012889516	A0A1S3GL31

Gene Model

Click here to download ENSDORG00000007579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000007579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000007579	Lsm10	55	30.000	ENSDORG00000026571	Lsm2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000007579	Lsm10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSDORG00000007579	Lsm10	100	91.870	ENSAMEG00000019854	LSM10	100	91.870	Ailuropoda_melanoleuca
ENSDORG00000007579	Lsm10	96	67.797	ENSACIG00000015420	oscp1a	78	67.797	Amphilophus_citrinellus
ENSDORG00000007579	Lsm10	95	64.103	ENSAOCG00000015607	LSM10	91	64.103	Amphiprion_ocellaris
ENSDORG00000007579	Lsm10	93	70.435	ENSAOCG00000015618	LSM10	95	70.435	Amphiprion_ocellaris
ENSDORG00000007579	Lsm10	93	70.435	ENSAOCG00000014654	-	95	70.435	Amphiprion_ocellaris
ENSDORG00000007579	Lsm10	93	70.435	ENSAPEG00000021845	-	95	70.435	Amphiprion_percula
ENSDORG00000007579	Lsm10	95	64.103	ENSAPEG00000021851	LSM10	91	64.103	Amphiprion_percula
ENSDORG00000007579	Lsm10	91	64.286	ENSATEG00000006310	oscp1a	83	64.286	Anabas_testudineus
ENSDORG00000007579	Lsm10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSDORG00000007579	Lsm10	98	90.833	ENSANAG00000031489	-	98	90.833	Aotus_nancymaae
ENSDORG00000007579	Lsm10	100	91.057	ENSANAG00000018759	-	100	91.057	Aotus_nancymaae
ENSDORG00000007579	Lsm10	94	68.103	ENSACLG00000004728	oscp1a	94	68.103	Astatotilapia_calliptera
ENSDORG00000007579	Lsm10	96	71.186	ENSAMXG00000025301	oscp1a	98	71.186	Astyanax_mexicanus
ENSDORG00000007579	Lsm10	98	90.833	ENSBTAG00000024096	LSM10	98	90.833	Bos_taurus
ENSDORG00000007579	Lsm10	100	91.057	ENSCJAG00000044880	LSM10	100	91.057	Callithrix_jacchus
ENSDORG00000007579	Lsm10	100	93.496	ENSCAFG00000003382	LSM10	100	93.496	Canis_familiaris
ENSDORG00000007579	Lsm10	100	93.496	ENSCAFG00020008920	LSM10	100	93.496	Canis_lupus_dingo
ENSDORG00000007579	Lsm10	98	90.833	ENSCHIG00000009398	LSM10	98	90.833	Capra_hircus
ENSDORG00000007579	Lsm10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSDORG00000007579	Lsm10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSDORG00000007579	Lsm10	100	91.057	ENSCCAG00000018913	-	100	91.057	Cebus_capucinus
ENSDORG00000007579	Lsm10	98	90.833	ENSCCAG00000008378	-	98	90.833	Cebus_capucinus
ENSDORG00000007579	Lsm10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSDORG00000007579	Lsm10	100	93.496	ENSCLAG00000008633	LSM10	100	93.496	Chinchilla_lanigera
ENSDORG00000007579	Lsm10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSDORG00000007579	Lsm10	100	91.200	ENSCHOG00000008615	LSM10	100	91.200	Choloepus_hoffmanni
ENSDORG00000007579	Lsm10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSDORG00000007579	Lsm10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSDORG00000007579	Lsm10	88	89.091	ENSCGRG00001022673	-	89	89.091	Cricetulus_griseus_chok1gshd
ENSDORG00000007579	Lsm10	99	93.443	ENSCGRG00001004317	-	100	93.443	Cricetulus_griseus_chok1gshd
ENSDORG00000007579	Lsm10	88	89.091	ENSCGRG00000015514	-	89	89.091	Cricetulus_griseus_crigri
ENSDORG00000007579	Lsm10	99	93.443	ENSCGRG00000014935	-	100	93.443	Cricetulus_griseus_crigri
ENSDORG00000007579	Lsm10	94	64.655	ENSCSEG00000010374	oscp1a	77	65.217	Cynoglossus_semilaevis
ENSDORG00000007579	Lsm10	97	66.387	ENSCVAG00000001536	oscp1a	90	66.387	Cyprinodon_variegatus
ENSDORG00000007579	Lsm10	98	71.901	ENSDARG00000101222	oscp1a	100	71.901	Danio_rerio
ENSDORG00000007579	Lsm10	69	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSDORG00000007579	Lsm10	99	92.623	ENSDNOG00000036662	LSM10	99	92.623	Dasypus_novemcinctus
ENSDORG00000007579	Lsm10	85	30.275	FBgn0033554	Lsm10	77	30.275	Drosophila_melanogaster
ENSDORG00000007579	Lsm10	100	91.057	ENSETEG00000005703	LSM10	100	91.057	Echinops_telfairi
ENSDORG00000007579	Lsm10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSDORG00000007579	Lsm10	100	93.496	ENSEASG00005012194	LSM10	100	93.496	Equus_asinus_asinus
ENSDORG00000007579	Lsm10	100	94.309	ENSECAG00000005071	LSM10	100	94.309	Equus_caballus
ENSDORG00000007579	Lsm10	100	91.870	ENSEEUG00000012032	LSM10	100	91.870	Erinaceus_europaeus
ENSDORG00000007579	Lsm10	98	68.595	ENSELUG00000007452	oscp1a	99	68.595	Esox_lucius
ENSDORG00000007579	Lsm10	100	69.106	ENSFALG00000000851	LSM10	100	69.106	Ficedula_albicollis
ENSDORG00000007579	Lsm10	100	89.431	ENSFDAG00000021056	LSM10	100	89.431	Fukomys_damarensis
ENSDORG00000007579	Lsm10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSDORG00000007579	Lsm10	92	63.717	ENSGMOG00000019832	oscp1a	95	63.717	Gadus_morhua
ENSDORG00000007579	Lsm10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSDORG00000007579	Lsm10	93	60.169	ENSGAFG00000016445	oscp1a	94	60.169	Gambusia_affinis
ENSDORG00000007579	Lsm10	94	65.517	ENSGACG00000002329	oscp1a	95	65.517	Gasterosteus_aculeatus
ENSDORG00000007579	Lsm10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSDORG00000007579	Lsm10	100	91.057	ENSGGOG00000003556	LSM10	100	91.057	Gorilla_gorilla
ENSDORG00000007579	Lsm10	94	68.103	ENSHBUG00000001722	oscp1a	94	68.103	Haplochromis_burtoni
ENSDORG00000007579	Lsm10	100	91.057	ENSHGLG00000011625	LSM10	100	91.057	Heterocephalus_glaber_female
ENSDORG00000007579	Lsm10	100	91.057	ENSHGLG00100001769	LSM10	100	91.057	Heterocephalus_glaber_male
ENSDORG00000007579	Lsm10	85	70.476	ENSIPUG00000005808	oscp1a	91	70.476	Ictalurus_punctatus
ENSDORG00000007579	Lsm10	100	93.496	ENSSTOG00000000606	LSM10	100	93.496	Ictidomys_tridecemlineatus
ENSDORG00000007579	Lsm10	94	65.517	ENSKMAG00000012143	oscp1a	96	65.517	Kryptolebias_marmoratus
ENSDORG00000007579	Lsm10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSDORG00000007579	Lsm10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSDORG00000007579	Lsm10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSDORG00000007579	Lsm10	100	93.496	ENSLAFG00000009600	LSM10	100	93.496	Loxodonta_africana
ENSDORG00000007579	Lsm10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSDORG00000007579	Lsm10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSDORG00000007579	Lsm10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSDORG00000007579	Lsm10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSDORG00000007579	Lsm10	98	65.000	ENSMAMG00000004427	oscp1a	98	65.000	Mastacembelus_armatus
ENSDORG00000007579	Lsm10	94	68.103	ENSMZEG00005026307	oscp1a	94	68.103	Maylandia_zebra
ENSDORG00000007579	Lsm10	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSDORG00000007579	Lsm10	99	90.984	ENSMAUG00000016624	Lsm10	100	90.984	Mesocricetus_auratus
ENSDORG00000007579	Lsm10	98	92.562	ENSMOCG00000021943	Lsm10	99	92.562	Microtus_ochrogaster
ENSDORG00000007579	Lsm10	90	68.468	ENSMMOG00000013597	oscp1a	83	68.468	Mola_mola
ENSDORG00000007579	Lsm10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSDORG00000007579	Lsm10	56	59.459	ENSMALG00000012661	oscp1a	58	59.459	Monopterus_albus
ENSDORG00000007579	Lsm10	98	92.562	MGP_CAROLIEiJ_G0026467	Lsm10	100	93.548	Mus_caroli
ENSDORG00000007579	Lsm10	98	93.388	ENSMUSG00000050188	Lsm10	100	94.624	Mus_musculus
ENSDORG00000007579	Lsm10	98	93.388	MGP_PahariEiJ_G0028798	Lsm10	100	94.624	Mus_pahari
ENSDORG00000007579	Lsm10	98	93.388	MGP_SPRETEiJ_G0027446	Lsm10	100	94.624	Mus_spretus
ENSDORG00000007579	Lsm10	100	93.496	ENSMPUG00000018593	LSM10	100	93.496	Mustela_putorius_furo
ENSDORG00000007579	Lsm10	100	89.431	ENSMLUG00000023895	LSM10	100	89.431	Myotis_lucifugus
ENSDORG00000007579	Lsm10	100	94.309	ENSNGAG00000015011	Lsm10	100	94.309	Nannospalax_galili
ENSDORG00000007579	Lsm10	94	68.966	ENSNBRG00000014306	oscp1a	94	68.966	Neolamprologus_brichardi
ENSDORG00000007579	Lsm10	100	92.683	ENSNLEG00000033754	LSM10	100	92.683	Nomascus_leucogenys
ENSDORG00000007579	Lsm10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSDORG00000007579	Lsm10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSDORG00000007579	Lsm10	100	93.496	ENSODEG00000019161	LSM10	100	93.496	Octodon_degus
ENSDORG00000007579	Lsm10	94	68.966	ENSONIG00000020904	oscp1a	95	68.966	Oreochromis_niloticus
ENSDORG00000007579	Lsm10	100	75.610	ENSOANG00000002066	LSM10	100	75.610	Ornithorhynchus_anatinus
ENSDORG00000007579	Lsm10	100	87.805	ENSOCUG00000005333	LSM10	100	87.805	Oryctolagus_cuniculus
ENSDORG00000007579	Lsm10	95	67.521	ENSORLG00000009504	oscp1a	97	67.521	Oryzias_latipes
ENSDORG00000007579	Lsm10	95	67.521	ENSORLG00020016201	oscp1a	97	67.521	Oryzias_latipes_hni
ENSDORG00000007579	Lsm10	95	67.521	ENSORLG00015007794	oscp1a	97	67.521	Oryzias_latipes_hsok
ENSDORG00000007579	Lsm10	100	93.496	ENSOGAG00000002653	LSM10	100	93.496	Otolemur_garnettii
ENSDORG00000007579	Lsm10	98	90.833	ENSOARG00000009596	LSM10	98	90.833	Ovis_aries
ENSDORG00000007579	Lsm10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSDORG00000007579	Lsm10	100	94.309	ENSPPRG00000014619	LSM10	100	94.309	Panthera_pardus
ENSDORG00000007579	Lsm10	100	94.309	ENSPTIG00000004613	LSM10	100	94.309	Panthera_tigris_altaica
ENSDORG00000007579	Lsm10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSDORG00000007579	Lsm10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSDORG00000007579	Lsm10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSDORG00000007579	Lsm10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSDORG00000007579	Lsm10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSDORG00000007579	Lsm10	84	83.495	ENSPCIG00000014865	LSM10	76	83.495	Phascolarctos_cinereus
ENSDORG00000007579	Lsm10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSDORG00000007579	Lsm10	91	66.964	ENSPLAG00000016537	oscp1a	85	66.964	Poecilia_latipinna
ENSDORG00000007579	Lsm10	88	67.593	ENSPMEG00000000174	oscp1a	94	67.593	Poecilia_mexicana
ENSDORG00000007579	Lsm10	91	66.071	ENSPREG00000009899	oscp1a	85	66.071	Poecilia_reticulata
ENSDORG00000007579	Lsm10	100	91.870	ENSPPYG00000001539	LSM10	100	91.870	Pongo_abelii
ENSDORG00000007579	Lsm10	96	92.373	ENSPCAG00000002520	LSM10	97	92.373	Procavia_capensis
ENSDORG00000007579	Lsm10	100	91.057	ENSPVAG00000008644	LSM10	100	91.057	Pteropus_vampyrus
ENSDORG00000007579	Lsm10	94	68.103	ENSPNYG00000003138	oscp1a	94	68.103	Pundamilia_nyererei
ENSDORG00000007579	Lsm10	95	68.376	ENSPNAG00000028829	oscp1a	97	68.376	Pygocentrus_nattereri
ENSDORG00000007579	Lsm10	98	94.215	ENSRNOG00000025716	Lsm10	99	94.215	Rattus_norvegicus
ENSDORG00000007579	Lsm10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSDORG00000007579	Lsm10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSDORG00000007579	Lsm10	100	91.057	ENSSBOG00000036413	-	100	91.057	Saimiri_boliviensis_boliviensis
ENSDORG00000007579	Lsm10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSDORG00000007579	Lsm10	98	65.289	ENSSFOG00015019954	lsm10	99	65.289	Scleropages_formosus
ENSDORG00000007579	Lsm10	93	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSDORG00000007579	Lsm10	94	66.379	ENSSDUG00000007090	oscp1a	94	66.379	Seriola_dumerili
ENSDORG00000007579	Lsm10	94	67.241	ENSSLDG00000000800	oscp1a	96	67.241	Seriola_lalandi_dorsalis
ENSDORG00000007579	Lsm10	100	91.200	ENSSARG00000004211	LSM10	100	92.800	Sorex_araneus
ENSDORG00000007579	Lsm10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSDORG00000007579	Lsm10	100	90.244	ENSSSCG00000038916	LSM10	100	90.244	Sus_scrofa
ENSDORG00000007579	Lsm10	98	71.901	ENSTGUG00000001602	-	99	71.901	Taeniopygia_guttata
ENSDORG00000007579	Lsm10	98	71.901	ENSTGUG00000001600	-	99	71.901	Taeniopygia_guttata
ENSDORG00000007579	Lsm10	94	68.966	ENSTRUG00000010531	oscp1a	94	68.966	Takifugu_rubripes
ENSDORG00000007579	Lsm10	100	92.683	ENSTBEG00000016674	LSM10	100	92.683	Tupaia_belangeri
ENSDORG00000007579	Lsm10	100	91.870	ENSUAMG00000020265	LSM10	100	91.870	Ursus_americanus
ENSDORG00000007579	Lsm10	100	91.870	ENSUMAG00000001438	LSM10	57	91.870	Ursus_maritimus
ENSDORG00000007579	Lsm10	100	93.496	ENSVVUG00000023209	LSM10	100	93.496	Vulpes_vulpes
ENSDORG00000007579	Lsm10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSDORG00000007579	Lsm10	96	60.800	ENSXCOG00000018776	oscp1a	79	60.800	Xiphophorus_couchianus
ENSDORG00000007579	Lsm10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus