EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000007984 (Gene tree)
Gene ID: 105984390
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 35405 bases
Position: chrKN672370.1:731815-767219
Accession: 105984390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000007492	SpoU_methylase	PF00588.19	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000007986	-	3876	XM_013014566	ENSDORP00000007492	1292 (aa)	XP_012870020	UPI000BACEF90

Gene Model

Click here to download ENSDORG00000007984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000007984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000007984	Tarbp1	100	74.383	ENSG00000059588	TARBP1	80	74.383	Homo_sapiens
ENSDORG00000007984	Tarbp1	100	45.858	ENSAPOG00000016419	si:dkey-85a20.4	80	45.783	Acanthochromis_polyacanthus
ENSDORG00000007984	Tarbp1	100	74.634	ENSAMEG00000003359	TARBP1	95	74.634	Ailuropoda_melanoleuca
ENSDORG00000007984	Tarbp1	100	45.734	ENSATEG00000020266	si:dkey-85a20.4	80	45.659	Anabas_testudineus
ENSDORG00000007984	Tarbp1	100	62.807	ENSAPLG00000007666	TARBP1	99	62.653	Anas_platyrhynchos
ENSDORG00000007984	Tarbp1	99	57.891	ENSACAG00000001142	TARBP1	81	57.814	Anolis_carolinensis
ENSDORG00000007984	Tarbp1	99	71.751	ENSANAG00000022031	TARBP1	82	71.751	Aotus_nancymaae
ENSDORG00000007984	Tarbp1	100	73.575	ENSBTAG00000004517	TARBP1	80	73.421	Bos_taurus
ENSDORG00000007984	Tarbp1	100	73.920	ENSCJAG00000018155	TARBP1	80	73.920	Callithrix_jacchus
ENSDORG00000007984	Tarbp1	100	74.306	ENSCAFG00000011533	TARBP1	92	74.306	Canis_familiaris
ENSDORG00000007984	Tarbp1	100	74.306	ENSCAFG00020027141	TARBP1	80	74.306	Canis_lupus_dingo
ENSDORG00000007984	Tarbp1	100	72.475	ENSCHIG00000011437	TARBP1	80	72.321	Capra_hircus
ENSDORG00000007984	Tarbp1	100	73.148	ENSTSYG00000010382	TARBP1	96	73.302	Carlito_syrichta
ENSDORG00000007984	Tarbp1	98	66.377	ENSCAPG00000010831	TARBP1	99	66.140	Cavia_aperea
ENSDORG00000007984	Tarbp1	100	74.228	ENSCPOG00000013995	TARBP1	81	73.940	Cavia_porcellus
ENSDORG00000007984	Tarbp1	100	74.151	ENSCCAG00000037278	TARBP1	80	74.151	Cebus_capucinus
ENSDORG00000007984	Tarbp1	100	74.383	ENSCATG00000011754	TARBP1	80	74.383	Cercocebus_atys
ENSDORG00000007984	Tarbp1	100	74.884	ENSCLAG00000003655	TARBP1	95	74.595	Chinchilla_lanigera
ENSDORG00000007984	Tarbp1	99	74.315	ENSCSAG00000010100	TARBP1	99	74.315	Chlorocebus_sabaeus
ENSDORG00000007984	Tarbp1	82	76.448	ENSCPBG00000005587	TARBP1	76	76.448	Chrysemys_picta_bellii
ENSDORG00000007984	Tarbp1	100	74.306	ENSCANG00000034343	TARBP1	95	74.306	Colobus_angolensis_palliatus
ENSDORG00000007984	Tarbp1	100	74.981	ENSCGRG00001016690	Tarbp1	82	74.672	Cricetulus_griseus_chok1gshd
ENSDORG00000007984	Tarbp1	100	74.981	ENSCGRG00000016893	Tarbp1	88	74.672	Cricetulus_griseus_crigri
ENSDORG00000007984	Tarbp1	100	42.912	ENSCSEG00000005255	si:dkey-85a20.4	73	49.865	Cynoglossus_semilaevis
ENSDORG00000007984	Tarbp1	99	47.135	ENSDARG00000079055	si:dkey-85a20.4	99	56.597	Danio_rerio
ENSDORG00000007984	Tarbp1	100	73.599	ENSDNOG00000008637	TARBP1	79	73.696	Dasypus_novemcinctus
ENSDORG00000007984	Tarbp1	100	75.617	ENSEASG00005000252	TARBP1	81	75.617	Equus_asinus_asinus
ENSDORG00000007984	Tarbp1	100	75.482	ENSECAG00000023673	TARBP1	78	81.699	Equus_caballus
ENSDORG00000007984	Tarbp1	99	44.747	ENSELUG00000012193	si:dkey-85a20.4	81	44.671	Esox_lucius
ENSDORG00000007984	Tarbp1	100	71.010	ENSFCAG00000014183	TARBP1	79	71.010	Felis_catus
ENSDORG00000007984	Tarbp1	99	62.923	ENSFALG00000013565	TARBP1	99	62.673	Ficedula_albicollis
ENSDORG00000007984	Tarbp1	99	72.734	ENSFDAG00000001308	TARBP1	99	72.218	Fukomys_damarensis
ENSDORG00000007984	Tarbp1	95	51.042	ENSFHEG00000007565	si:dkey-85a20.4	79	50.392	Fundulus_heteroclitus
ENSDORG00000007984	Tarbp1	100	43.825	ENSGMOG00000004549	si:dkey-85a20.4	94	44.051	Gadus_morhua
ENSDORG00000007984	Tarbp1	99	65.574	ENSGALG00000011000	TARBP1	81	59.132	Gallus_gallus
ENSDORG00000007984	Tarbp1	100	45.186	ENSGAFG00000007387	si:dkey-85a20.4	80	44.799	Gambusia_affinis
ENSDORG00000007984	Tarbp1	100	46.762	ENSGACG00000005865	si:dkey-85a20.4	93	46.611	Gasterosteus_aculeatus
ENSDORG00000007984	Tarbp1	100	65.027	ENSGAGG00000012102	TARBP1	83	64.873	Gopherus_agassizii
ENSDORG00000007984	Tarbp1	100	72.132	ENSGGOG00000022879	TARBP1	94	72.132	Gorilla_gorilla
ENSDORG00000007984	Tarbp1	100	45.808	ENSHBUG00000008877	si:dkey-85a20.4	80	45.768	Haplochromis_burtoni
ENSDORG00000007984	Tarbp1	100	74.769	ENSHGLG00000011592	TARBP1	81	74.634	Heterocephalus_glaber_female
ENSDORG00000007984	Tarbp1	100	74.691	ENSHGLG00100015169	TARBP1	89	74.614	Heterocephalus_glaber_male
ENSDORG00000007984	Tarbp1	99	43.960	ENSIPUG00000005249	si:dkey-85a20.4	78	44.037	Ictalurus_punctatus
ENSDORG00000007984	Tarbp1	100	72.720	ENSSTOG00000032291	TARBP1	93	72.798	Ictidomys_tridecemlineatus
ENSDORG00000007984	Tarbp1	100	72.124	ENSJJAG00000017840	Tarbp1	89	72.124	Jaculus_jaculus
ENSDORG00000007984	Tarbp1	75	48.656	ENSKMAG00000017546	si:dkey-85a20.4	64	48.522	Kryptolebias_marmoratus
ENSDORG00000007984	Tarbp1	76	51.282	ENSLBEG00000012132	si:dkey-85a20.4	69	51.282	Labrus_bergylta
ENSDORG00000007984	Tarbp1	100	52.816	ENSLACG00000004337	TARBP1	80	52.740	Latimeria_chalumnae
ENSDORG00000007984	Tarbp1	100	49.656	ENSLOCG00000016214	si:dkey-85a20.4	80	49.580	Lepisosteus_oculatus
ENSDORG00000007984	Tarbp1	100	73.349	ENSLAFG00000011394	TARBP1	82	73.349	Loxodonta_africana
ENSDORG00000007984	Tarbp1	100	71.781	ENSMFAG00000041068	TARBP1	81	71.781	Macaca_fascicularis
ENSDORG00000007984	Tarbp1	100	71.781	ENSMMUG00000021703	TARBP1	80	71.781	Macaca_mulatta
ENSDORG00000007984	Tarbp1	100	74.306	ENSMNEG00000045002	TARBP1	80	74.306	Macaca_nemestrina
ENSDORG00000007984	Tarbp1	100	74.151	ENSMLEG00000044182	TARBP1	96	74.151	Mandrillus_leucophaeus
ENSDORG00000007984	Tarbp1	100	45.792	ENSMAMG00000021760	si:dkey-85a20.4	81	45.593	Mastacembelus_armatus
ENSDORG00000007984	Tarbp1	100	45.768	ENSMZEG00005005751	si:dkey-85a20.4	80	45.768	Maylandia_zebra
ENSDORG00000007984	Tarbp1	100	75.135	ENSMAUG00000020968	Tarbp1	82	74.981	Mesocricetus_auratus
ENSDORG00000007984	Tarbp1	100	66.256	ENSMICG00000015280	TARBP1	79	66.256	Microcebus_murinus
ENSDORG00000007984	Tarbp1	100	74.575	ENSMOCG00000004128	Tarbp1	82	74.575	Microtus_ochrogaster
ENSDORG00000007984	Tarbp1	99	44.833	ENSMMOG00000007795	si:dkey-85a20.4	80	44.985	Mola_mola
ENSDORG00000007984	Tarbp1	100	66.872	ENSMODG00000008504	TARBP1	78	66.795	Monodelphis_domestica
ENSDORG00000007984	Tarbp1	99	45.205	ENSMALG00000002916	si:dkey-85a20.4	80	45.011	Monopterus_albus
ENSDORG00000007984	Tarbp1	100	74.266	MGP_CAROLIEiJ_G0031729	Tarbp1	78	78.599	Mus_caroli
ENSDORG00000007984	Tarbp1	100	74.189	ENSMUSG00000090290	Tarbp1	82	74.189	Mus_musculus
ENSDORG00000007984	Tarbp1	100	74.151	MGP_PahariEiJ_G0023326	Tarbp1	82	74.151	Mus_pahari
ENSDORG00000007984	Tarbp1	100	74.420	MGP_SPRETEiJ_G0032846	Tarbp1	82	74.420	Mus_spretus
ENSDORG00000007984	Tarbp1	95	73.603	ENSMPUG00000002802	TARBP1	99	73.603	Mustela_putorius_furo
ENSDORG00000007984	Tarbp1	100	70.620	ENSMLUG00000002414	TARBP1	95	71.012	Myotis_lucifugus
ENSDORG00000007984	Tarbp1	100	74.614	ENSNLEG00000002518	TARBP1	80	74.614	Nomascus_leucogenys
ENSDORG00000007984	Tarbp1	79	76.690	ENSOPRG00000013822	TARBP1	63	76.690	Ochotona_princeps
ENSDORG00000007984	Tarbp1	100	73.900	ENSODEG00000005238	TARBP1	84	73.765	Octodon_degus
ENSDORG00000007984	Tarbp1	100	45.597	ENSONIG00000009789	si:dkey-85a20.4	93	45.597	Oreochromis_niloticus
ENSDORG00000007984	Tarbp1	100	73.668	ENSOCUG00000017418	TARBP1	79	73.668	Oryctolagus_cuniculus
ENSDORG00000007984	Tarbp1	100	45.461	ENSORLG00000010529	si:dkey-85a20.4	79	45.234	Oryzias_latipes
ENSDORG00000007984	Tarbp1	100	45.337	ENSORLG00020019264	si:dkey-85a20.4	79	45.110	Oryzias_latipes_hni
ENSDORG00000007984	Tarbp1	100	45.186	ENSORLG00015003276	si:dkey-85a20.4	79	44.958	Oryzias_latipes_hsok
ENSDORG00000007984	Tarbp1	100	72.132	ENSOGAG00000002379	TARBP1	80	72.132	Otolemur_garnettii
ENSDORG00000007984	Tarbp1	100	72.517	ENSOARG00000003434	TARBP1	86	72.363	Ovis_aries
ENSDORG00000007984	Tarbp1	100	74.691	ENSPPAG00000028097	TARBP1	95	74.691	Pan_paniscus
ENSDORG00000007984	Tarbp1	100	70.393	ENSPPRG00000013561	TARBP1	83	70.393	Panthera_pardus
ENSDORG00000007984	Tarbp1	100	73.323	ENSPTIG00000009281	TARBP1	96	73.323	Panthera_tigris_altaica
ENSDORG00000007984	Tarbp1	100	74.537	ENSPTRG00000002124	TARBP1	80	74.537	Pan_troglodytes
ENSDORG00000007984	Tarbp1	100	74.460	ENSPANG00000021933	TARBP1	80	74.460	Papio_anubis
ENSDORG00000007984	Tarbp1	100	47.619	ENSPKIG00000016716	si:dkey-85a20.4	79	47.619	Paramormyrops_kingsleyae
ENSDORG00000007984	Tarbp1	99	64.119	ENSPSIG00000010699	TARBP1	99	64.041	Pelodiscus_sinensis
ENSDORG00000007984	Tarbp1	100	74.730	ENSPEMG00000006888	Tarbp1	86	74.730	Peromyscus_maniculatus_bairdii
ENSDORG00000007984	Tarbp1	88	78.947	ENSPCIG00000029710	TARBP1	76	78.947	Phascolarctos_cinereus
ENSDORG00000007984	Tarbp1	100	44.739	ENSPFOG00000013020	si:dkey-85a20.4	93	44.545	Poecilia_formosa
ENSDORG00000007984	Tarbp1	100	44.705	ENSPLAG00000006044	si:dkey-85a20.4	80	44.512	Poecilia_latipinna
ENSDORG00000007984	Tarbp1	100	44.815	ENSPMEG00000017857	si:dkey-85a20.4	80	44.428	Poecilia_mexicana
ENSDORG00000007984	Tarbp1	100	45.091	ENSPREG00000022753	si:dkey-85a20.4	80	45.091	Poecilia_reticulata
ENSDORG00000007984	Tarbp1	89	92.000	ENSPPYG00000000102	TARBP1	78	92.000	Pongo_abelii
ENSDORG00000007984	Tarbp1	86	67.092	ENSPCAG00000004808	TARBP1	69	67.092	Procavia_capensis
ENSDORG00000007984	Tarbp1	100	71.550	ENSPCOG00000005666	TARBP1	80	71.550	Propithecus_coquereli
ENSDORG00000007984	Tarbp1	100	63.671	ENSPVAG00000014798	TARBP1	81	63.748	Pteropus_vampyrus
ENSDORG00000007984	Tarbp1	100	44.890	ENSPNYG00000019135	si:dkey-85a20.4	79	44.890	Pundamilia_nyererei
ENSDORG00000007984	Tarbp1	100	70.093	ENSRNOG00000053574	Tarbp1	82	70.093	Rattus_norvegicus
ENSDORG00000007984	Tarbp1	100	68.441	ENSRBIG00000043362	TARBP1	87	68.441	Rhinopithecus_bieti
ENSDORG00000007984	Tarbp1	100	73.997	ENSRROG00000029527	TARBP1	83	73.997	Rhinopithecus_roxellana
ENSDORG00000007984	Tarbp1	100	73.843	ENSSBOG00000034503	TARBP1	93	73.843	Saimiri_boliviensis_boliviensis
ENSDORG00000007984	Tarbp1	100	66.103	ENSSHAG00000000013	TARBP1	96	66.103	Sarcophilus_harrisii
ENSDORG00000007984	Tarbp1	100	46.647	ENSSFOG00015002660	si:dkey-85a20.4	96	46.727	Scleropages_formosus
ENSDORG00000007984	Tarbp1	100	46.856	ENSSMAG00000007081	si:dkey-85a20.4	78	46.781	Scophthalmus_maximus
ENSDORG00000007984	Tarbp1	100	44.841	ENSSDUG00000023566	si:dkey-85a20.4	80	44.935	Seriola_dumerili
ENSDORG00000007984	Tarbp1	100	46.431	ENSSLDG00000020200	si:dkey-85a20.4	80	46.582	Seriola_lalandi_dorsalis
ENSDORG00000007984	Tarbp1	94	72.770	ENSSARG00000012207	TARBP1	75	72.770	Sorex_araneus
ENSDORG00000007984	Tarbp1	100	61.799	ENSSPUG00000015364	TARBP1	80	61.799	Sphenodon_punctatus
ENSDORG00000007984	Tarbp1	100	46.084	ENSSPAG00000007213	si:dkey-85a20.4	80	45.846	Stegastes_partitus
ENSDORG00000007984	Tarbp1	95	88.235	ENSSSCG00000010160	TARBP1	79	88.983	Sus_scrofa
ENSDORG00000007984	Tarbp1	100	62.289	ENSTGUG00000010214	TARBP1	99	62.135	Taeniopygia_guttata
ENSDORG00000007984	Tarbp1	100	44.419	ENSTNIG00000016586	si:dkey-85a20.4	95	44.655	Tetraodon_nigroviridis
ENSDORG00000007984	Tarbp1	95	69.682	ENSTTRG00000008707	TARBP1	79	69.519	Tursiops_truncatus
ENSDORG00000007984	Tarbp1	100	74.730	ENSUMAG00000006730	TARBP1	97	74.730	Ursus_maritimus
ENSDORG00000007984	Tarbp1	76	88.889	ENSVPAG00000007665	TARBP1	70	88.889	Vicugna_pacos
ENSDORG00000007984	Tarbp1	100	74.460	ENSVVUG00000007460	TARBP1	96	74.897	Vulpes_vulpes
ENSDORG00000007984	Tarbp1	100	52.793	ENSXETG00000016224	tarbp1	95	52.716	Xenopus_tropicalis
ENSDORG00000007984	Tarbp1	91	48.571	ENSXCOG00000011779	si:dkey-85a20.4	87	48.571	Xiphophorus_couchianus
ENSDORG00000007984	Tarbp1	81	43.284	ENSXMAG00000009600	si:dkey-85a20.4	100	43.284	Xiphophorus_maculatus