EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000008260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 1247 bases
Position: chrKN672354.1:13286294-13287540
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000007750	zf-RNPHF	PF08080.12	8.8e-23	1	1
ENSDORP00000007750	RRM_1	PF00076.22	8.5e-17	1	2
ENSDORP00000007750	RRM_1	PF00076.22	8.5e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008260	-	1206	-	ENSDORP00000007750	401 (aa)	-	UPI000BAD1369

Gene Model

Click here to download ENSDORG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000008260	-	99	69.734	ENSDORG00000005453	Hnrnph1	97	68.736
ENSDORG00000008260	-	100	89.157	ENSDORG00000024936	-	100	89.157
ENSDORG00000008260	-	100	93.253	ENSDORG00000024298	-	100	93.253
ENSDORG00000008260	-	71	77.922	ENSDORG00000011470	Hnrnph3	96	55.183
ENSDORG00000008260	-	100	90.370	ENSDORG00000005431	-	100	90.370
ENSDORG00000008260	-	87	38.567	ENSDORG00000015145	Grsf1	93	46.923
ENSDORG00000008260	-	99	68.281	ENSDORG00000026166	Hnrnph2	97	67.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008260	-	100	90.120	ENSG00000169813	HNRNPF	100	90.120	Homo_sapiens
ENSDORG00000008260	-	100	90.120	ENSAMEG00000018983	HNRNPF	100	90.120	Ailuropoda_melanoleuca
ENSDORG00000008260	-	88	76.486	ENSANAG00000033452	-	89	76.486	Aotus_nancymaae
ENSDORG00000008260	-	100	87.470	ENSANAG00000033285	-	100	87.470	Aotus_nancymaae
ENSDORG00000008260	-	100	78.240	ENSBTAG00000020513	-	100	78.240	Bos_taurus
ENSDORG00000008260	-	100	90.361	ENSBTAG00000008853	HNRNPF	100	90.361	Bos_taurus
ENSDORG00000008260	-	100	90.602	ENSCJAG00000008291	HNRNPF	100	90.602	Callithrix_jacchus
ENSDORG00000008260	-	100	90.120	ENSCAFG00000007044	HNRNPF	100	90.120	Canis_familiaris
ENSDORG00000008260	-	97	67.892	ENSCHIG00000022971	-	99	67.892	Capra_hircus
ENSDORG00000008260	-	100	90.361	ENSCHIG00000006714	HNRNPF	100	90.361	Capra_hircus
ENSDORG00000008260	-	100	77.184	ENSTSYG00000002112	-	100	77.184	Carlito_syrichta
ENSDORG00000008260	-	100	89.639	ENSTSYG00000030439	-	100	89.639	Carlito_syrichta
ENSDORG00000008260	-	99	90.580	ENSCAPG00000011521	HNRNPF	99	90.580	Cavia_aperea
ENSDORG00000008260	-	99	90.580	ENSCPOG00000003678	HNRNPF	99	90.580	Cavia_porcellus
ENSDORG00000008260	-	100	72.530	ENSCCAG00000028687	-	100	72.530	Cebus_capucinus
ENSDORG00000008260	-	100	90.361	ENSCCAG00000031457	-	100	90.361	Cebus_capucinus
ENSDORG00000008260	-	99	90.580	ENSCLAG00000005161	HNRNPF	99	90.580	Chinchilla_lanigera
ENSDORG00000008260	-	100	89.157	ENSCANG00000003086	-	100	89.157	Colobus_angolensis_palliatus
ENSDORG00000008260	-	100	91.325	ENSCGRG00001016276	Hnrnpf	100	91.325	Cricetulus_griseus_chok1gshd
ENSDORG00000008260	-	99	66.998	ENSCGRG00001016206	-	94	66.998	Cricetulus_griseus_chok1gshd
ENSDORG00000008260	-	100	86.988	ENSDNOG00000030849	-	100	86.988	Dasypus_novemcinctus
ENSDORG00000008260	-	100	90.361	ENSEASG00005006903	HNRNPF	100	90.361	Equus_asinus_asinus
ENSDORG00000008260	-	100	87.711	ENSECAG00000003229	HNRNPF	100	87.711	Equus_caballus
ENSDORG00000008260	-	100	90.120	ENSFCAG00000028219	-	100	90.120	Felis_catus
ENSDORG00000008260	-	99	90.580	ENSFDAG00000011431	-	99	90.580	Fukomys_damarensis
ENSDORG00000008260	-	95	82.443	ENSFDAG00000007858	-	98	82.443	Fukomys_damarensis
ENSDORG00000008260	-	99	72.947	ENSFDAG00000015308	-	99	72.947	Fukomys_damarensis
ENSDORG00000008260	-	90	90.426	ENSGGOG00000010867	HNRNPF	93	90.426	Gorilla_gorilla
ENSDORG00000008260	-	100	87.470	ENSHGLG00000010276	-	100	87.470	Heterocephalus_glaber_female
ENSDORG00000008260	-	90	86.436	ENSHGLG00000014139	-	97	86.436	Heterocephalus_glaber_female
ENSDORG00000008260	-	99	90.338	ENSHGLG00000000147	-	99	90.338	Heterocephalus_glaber_female
ENSDORG00000008260	-	99	80.676	ENSHGLG00000017607	-	100	80.676	Heterocephalus_glaber_female
ENSDORG00000008260	-	99	86.957	ENSHGLG00100019572	-	99	86.957	Heterocephalus_glaber_male
ENSDORG00000008260	-	95	82.828	ENSHGLG00100019910	-	100	82.828	Heterocephalus_glaber_male
ENSDORG00000008260	-	99	86.957	ENSHGLG00100019558	-	100	86.957	Heterocephalus_glaber_male
ENSDORG00000008260	-	90	79.787	ENSHGLG00100010905	-	97	79.787	Heterocephalus_glaber_male
ENSDORG00000008260	-	97	89.604	ENSHGLG00100020825	-	100	89.604	Heterocephalus_glaber_male
ENSDORG00000008260	-	100	76.739	ENSSTOG00000023820	-	100	76.739	Ictidomys_tridecemlineatus
ENSDORG00000008260	-	100	91.084	ENSSTOG00000025560	-	100	91.084	Ictidomys_tridecemlineatus
ENSDORG00000008260	-	100	83.010	ENSSTOG00000022853	-	100	83.010	Ictidomys_tridecemlineatus
ENSDORG00000008260	-	89	87.903	ENSJJAG00000014334	-	99	87.903	Jaculus_jaculus
ENSDORG00000008260	-	100	68.900	ENSJJAG00000000554	-	100	68.900	Jaculus_jaculus
ENSDORG00000008260	-	100	75.422	ENSJJAG00000022288	-	100	75.422	Jaculus_jaculus
ENSDORG00000008260	-	100	82.651	ENSJJAG00000017385	-	100	82.651	Jaculus_jaculus
ENSDORG00000008260	-	100	61.347	ENSJJAG00000014424	-	100	61.347	Jaculus_jaculus
ENSDORG00000008260	-	99	88.193	ENSLAFG00000000424	HNRNPF	99	88.193	Loxodonta_africana
ENSDORG00000008260	-	100	90.120	ENSMFAG00000021184	HNRNPF	100	90.120	Macaca_fascicularis
ENSDORG00000008260	-	100	90.120	ENSMMUG00000020982	HNRNPF	100	90.120	Macaca_mulatta
ENSDORG00000008260	-	100	90.120	ENSMLEG00000023515	HNRNPF	100	90.120	Mandrillus_leucophaeus
ENSDORG00000008260	-	100	91.325	ENSMAUG00000007892	Hnrnpf	100	91.325	Mesocricetus_auratus
ENSDORG00000008260	-	99	72.464	ENSMICG00000043739	-	99	72.464	Microcebus_murinus
ENSDORG00000008260	-	99	72.684	ENSMICG00000044171	-	99	72.684	Microcebus_murinus
ENSDORG00000008260	-	100	90.361	ENSMOCG00000014915	Hnrnpf	100	90.361	Microtus_ochrogaster
ENSDORG00000008260	-	100	91.325	ENSMUSG00000042079	Hnrnpf	100	91.325	Mus_musculus
ENSDORG00000008260	-	100	90.120	MGP_PahariEiJ_G0026903	-	100	90.120	Mus_pahari
ENSDORG00000008260	-	96	90.727	ENSMPUG00000017283	HNRNPF	99	90.727	Mustela_putorius_furo
ENSDORG00000008260	-	100	88.462	ENSMLUG00000007261	HNRNPF	100	88.462	Myotis_lucifugus
ENSDORG00000008260	-	100	78.025	ENSNGAG00000014079	-	100	78.025	Nannospalax_galili
ENSDORG00000008260	-	100	91.084	ENSNGAG00000010409	-	100	91.084	Nannospalax_galili
ENSDORG00000008260	-	100	71.571	ENSNGAG00000009482	-	100	71.571	Nannospalax_galili
ENSDORG00000008260	-	100	90.120	ENSNLEG00000019098	HNRNPF	100	90.120	Nomascus_leucogenys
ENSDORG00000008260	-	99	83.495	ENSODEG00000002359	-	99	83.495	Octodon_degus
ENSDORG00000008260	-	99	90.580	ENSODEG00000019266	-	99	90.580	Octodon_degus
ENSDORG00000008260	-	100	90.120	ENSOCUG00000024719	-	100	90.120	Oryctolagus_cuniculus
ENSDORG00000008260	-	100	84.819	ENSOCUG00000024604	-	100	84.819	Oryctolagus_cuniculus
ENSDORG00000008260	-	99	84.337	ENSOGAG00000013734	-	99	84.337	Otolemur_garnettii
ENSDORG00000008260	-	100	88.148	ENSOGAG00000030480	-	100	88.148	Otolemur_garnettii
ENSDORG00000008260	-	100	75.422	ENSOARG00000016658	-	100	75.422	Ovis_aries
ENSDORG00000008260	-	88	91.281	ENSOARG00000003995	HNRNPF	92	91.281	Ovis_aries
ENSDORG00000008260	-	100	90.120	ENSPPRG00000021222	HNRNPF	100	90.120	Panthera_pardus
ENSDORG00000008260	-	100	90.120	ENSPTIG00000009644	HNRNPF	100	90.120	Panthera_tigris_altaica
ENSDORG00000008260	-	100	90.120	ENSPTRG00000002446	HNRNPF	100	90.120	Pan_troglodytes
ENSDORG00000008260	-	100	89.880	ENSPANG00000002212	HNRNPF	100	89.880	Papio_anubis
ENSDORG00000008260	-	100	90.120	ENSPPYG00000002212	HNRNPF	100	90.120	Pongo_abelii
ENSDORG00000008260	-	100	87.500	ENSPCAG00000013169	HNRNPF	100	87.500	Procavia_capensis
ENSDORG00000008260	-	100	88.675	ENSPVAG00000011646	HNRNPF	100	88.675	Pteropus_vampyrus
ENSDORG00000008260	-	100	91.325	ENSRNOG00000014562	Hnrnpf	100	91.325	Rattus_norvegicus
ENSDORG00000008260	-	100	90.120	ENSRROG00000001235	HNRNPF	100	90.120	Rhinopithecus_roxellana
ENSDORG00000008260	-	100	90.602	ENSSBOG00000018361	HNRNPF	100	90.602	Saimiri_boliviensis_boliviensis
ENSDORG00000008260	-	100	90.602	ENSSARG00000010059	HNRNPF	100	90.602	Sorex_araneus
ENSDORG00000008260	-	100	54.791	ENSSSCG00000024956	-	96	54.791	Sus_scrofa
ENSDORG00000008260	-	100	89.639	ENSSSCG00000010203	-	100	89.639	Sus_scrofa
ENSDORG00000008260	-	98	66.334	ENSTBEG00000016094	HNRNPF	100	66.334	Tupaia_belangeri
ENSDORG00000008260	-	100	90.120	ENSUAMG00000000455	HNRNPF	100	90.120	Ursus_americanus
ENSDORG00000008260	-	100	90.120	ENSUMAG00000016485	HNRNPF	100	90.120	Ursus_maritimus
ENSDORG00000008260	-	100	90.120	ENSVVUG00000021261	HNRNPF	100	90.120	Vulpes_vulpes