EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000008516 (Gene tree)
Gene ID: -
Gene Symbol: Vars2
Alias: 1190004I24Rik|Vars2l
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 14467 bases
Position: chrKN672484.1:503020-517486
Accession: 105996865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024187	Anticodon_1	PF08264.13	1.1e-30	1	1
ENSDORP00000008000	Anticodon_1	PF08264.13	1.2e-30	1	1
ENSDORP00000008000	tRNA-synt_1	PF00133.22	8.9e-136	1	1
ENSDORP00000024187	tRNA-synt_1	PF00133.22	4.7e-112	1	2
ENSDORP00000024187	tRNA-synt_1	PF00133.22	4.7e-112	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033134	-	2571	-	ENSDORP00000024187	856 (aa)	-	UPI000BAD13F9
ENSDORT00000008521	-	2685	XM_013031108	ENSDORP00000008000	894 (aa)	XP_012886562	UPI000BACF8FE

Gene Model

Click here to download ENSDORG00000008516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000008516	Vars2	94	47.986	ENSDORG00000016433	Vars	77	47.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008516	Vars2	94	49.717	ENSAPOG00000007396	vars2	81	49.887	Acanthochromis_polyacanthus
ENSDORG00000008516	Vars2	93	85.969	ENSAMEG00000012997	VARS2	77	85.969	Ailuropoda_melanoleuca
ENSDORG00000008516	Vars2	93	49.827	ENSACIG00000004344	vars2	81	49.827	Amphilophus_citrinellus
ENSDORG00000008516	Vars2	94	49.147	ENSAOCG00000000476	vars2	81	49.033	Amphiprion_ocellaris
ENSDORG00000008516	Vars2	94	49.147	ENSAPEG00000008646	vars2	79	49.147	Amphiprion_percula
ENSDORG00000008516	Vars2	93	50.173	ENSATEG00000012291	vars2	80	50.173	Anabas_testudineus
ENSDORG00000008516	Vars2	94	56.272	ENSACAG00000022093	VARS2	79	56.272	Anolis_carolinensis
ENSDORG00000008516	Vars2	93	86.786	ENSANAG00000038018	VARS2	79	86.786	Aotus_nancymaae
ENSDORG00000008516	Vars2	93	49.829	ENSACLG00000018673	vars2	81	49.829	Astatotilapia_calliptera
ENSDORG00000008516	Vars2	94	50.682	ENSAMXG00000017773	vars2	79	51.270	Astyanax_mexicanus
ENSDORG00000008516	Vars2	93	86.331	ENSBTAG00000010698	VARS2	78	86.277	Bos_taurus
ENSDORG00000008516	Vars2	93	86.603	ENSCJAG00000019826	VARS2	78	86.603	Callithrix_jacchus
ENSDORG00000008516	Vars2	93	84.899	ENSCAFG00000000454	VARS2	79	84.899	Canis_familiaris
ENSDORG00000008516	Vars2	85	81.438	ENSCAFG00020019387	VARS2	72	86.441	Canis_lupus_dingo
ENSDORG00000008516	Vars2	93	86.555	ENSCHIG00000007847	VARS2	78	86.396	Capra_hircus
ENSDORG00000008516	Vars2	93	86.499	ENSTSYG00000009904	VARS2	78	86.499	Carlito_syrichta
ENSDORG00000008516	Vars2	94	83.432	ENSCAPG00000017770	VARS2	90	83.432	Cavia_aperea
ENSDORG00000008516	Vars2	93	83.532	ENSCPOG00000021834	VARS2	78	83.532	Cavia_porcellus
ENSDORG00000008516	Vars2	93	87.262	ENSCCAG00000037907	VARS2	79	87.262	Cebus_capucinus
ENSDORG00000008516	Vars2	93	87.814	ENSCATG00000032554	VARS2	78	87.814	Cercocebus_atys
ENSDORG00000008516	Vars2	93	84.405	ENSCLAG00000002889	VARS2	79	84.405	Chinchilla_lanigera
ENSDORG00000008516	Vars2	93	87.694	ENSCSAG00000008327	VARS2	78	87.694	Chlorocebus_sabaeus
ENSDORG00000008516	Vars2	91	60.072	ENSCPBG00000021502	VARS2	82	60.072	Chrysemys_picta_bellii
ENSDORG00000008516	Vars2	93	87.336	ENSCANG00000014991	VARS2	78	87.336	Colobus_angolensis_palliatus
ENSDORG00000008516	Vars2	93	85.018	ENSCGRG00001021535	Vars2	79	85.018	Cricetulus_griseus_chok1gshd
ENSDORG00000008516	Vars2	93	85.018	ENSCGRG00000014112	Vars2	79	85.018	Cricetulus_griseus_crigri
ENSDORG00000008516	Vars2	81	61.272	ENSCSEG00000015432	vars2	76	54.902	Cynoglossus_semilaevis
ENSDORG00000008516	Vars2	74	53.226	ENSCVAG00000017765	vars2	94	53.226	Cyprinodon_variegatus
ENSDORG00000008516	Vars2	93	52.453	ENSDARG00000056717	vars2	80	52.453	Danio_rerio
ENSDORG00000008516	Vars2	89	78.283	ENSETEG00000014844	VARS2	79	72.877	Echinops_telfairi
ENSDORG00000008516	Vars2	93	87.560	ENSEASG00005019997	VARS2	76	87.560	Equus_asinus_asinus
ENSDORG00000008516	Vars2	93	88.810	ENSECAG00000018202	VARS2	79	88.810	Equus_caballus
ENSDORG00000008516	Vars2	77	84.466	ENSEEUG00000012591	-	63	84.466	Erinaceus_europaeus
ENSDORG00000008516	Vars2	93	49.773	ENSELUG00000017824	vars2	80	49.773	Esox_lucius
ENSDORG00000008516	Vars2	93	86.445	ENSFCAG00000010531	VARS2	79	86.445	Felis_catus
ENSDORG00000008516	Vars2	94	84.816	ENSFDAG00000017216	VARS2	79	84.816	Fukomys_damarensis
ENSDORG00000008516	Vars2	84	50.528	ENSFHEG00000013932	vars2	74	50.528	Fundulus_heteroclitus
ENSDORG00000008516	Vars2	90	52.433	ENSGMOG00000018960	vars2	85	52.433	Gadus_morhua
ENSDORG00000008516	Vars2	85	50.063	ENSGAFG00000004737	vars2	84	50.063	Gambusia_affinis
ENSDORG00000008516	Vars2	93	51.469	ENSGACG00000001464	vars2	85	51.469	Gasterosteus_aculeatus
ENSDORG00000008516	Vars2	94	59.793	ENSGAGG00000011652	VARS2	87	59.793	Gopherus_agassizii
ENSDORG00000008516	Vars2	93	86.977	ENSGGOG00000014587	VARS2	79	86.223	Gorilla_gorilla
ENSDORG00000008516	Vars2	93	49.655	ENSHBUG00000002448	vars2	83	49.655	Haplochromis_burtoni
ENSDORG00000008516	Vars2	93	84.405	ENSHGLG00000012886	VARS2	76	84.405	Heterocephalus_glaber_female
ENSDORG00000008516	Vars2	93	84.167	ENSHGLG00100016535	VARS2	79	84.167	Heterocephalus_glaber_male
ENSDORG00000008516	Vars2	81	49.264	ENSHCOG00000017907	vars2	94	51.622	Hippocampus_comes
ENSDORG00000008516	Vars2	93	52.037	ENSIPUG00000015573	Vars2	79	52.037	Ictalurus_punctatus
ENSDORG00000008516	Vars2	93	87.723	ENSSTOG00000009924	VARS2	79	87.723	Ictidomys_tridecemlineatus
ENSDORG00000008516	Vars2	93	84.827	ENSJJAG00000011144	Vars2	79	84.827	Jaculus_jaculus
ENSDORG00000008516	Vars2	93	49.602	ENSKMAG00000001393	vars2	80	49.602	Kryptolebias_marmoratus
ENSDORG00000008516	Vars2	94	50.395	ENSLBEG00000011949	vars2	83	50.395	Labrus_bergylta
ENSDORG00000008516	Vars2	52	60.981	ENSLBEG00000005480	-	67	62.227	Labrus_bergylta
ENSDORG00000008516	Vars2	92	53.121	ENSLACG00000001576	-	82	53.121	Latimeria_chalumnae
ENSDORG00000008516	Vars2	93	84.671	ENSLAFG00000015183	VARS2	78	84.671	Loxodonta_africana
ENSDORG00000008516	Vars2	93	87.336	ENSMFAG00000042367	VARS2	78	87.336	Macaca_fascicularis
ENSDORG00000008516	Vars2	93	87.336	ENSMMUG00000018609	VARS2	78	87.336	Macaca_mulatta
ENSDORG00000008516	Vars2	93	87.455	ENSMNEG00000043163	VARS2	78	87.455	Macaca_nemestrina
ENSDORG00000008516	Vars2	93	88.053	ENSMLEG00000041728	VARS2	76	88.053	Mandrillus_leucophaeus
ENSDORG00000008516	Vars2	93	48.750	ENSMAMG00000020339	vars2	80	48.750	Mastacembelus_armatus
ENSDORG00000008516	Vars2	93	49.714	ENSMZEG00005017669	vars2	81	49.714	Maylandia_zebra
ENSDORG00000008516	Vars2	93	84.679	ENSMAUG00000018946	Vars2	79	84.679	Mesocricetus_auratus
ENSDORG00000008516	Vars2	74	87.779	ENSMICG00000005365	VARS2	75	87.779	Microcebus_murinus
ENSDORG00000008516	Vars2	86	87.086	ENSMOCG00000014607	Vars2	77	87.086	Microtus_ochrogaster
ENSDORG00000008516	Vars2	93	49.708	ENSMMOG00000012122	vars2	81	49.192	Mola_mola
ENSDORG00000008516	Vars2	94	75.323	ENSMODG00000015848	VARS2	79	75.323	Monodelphis_domestica
ENSDORG00000008516	Vars2	94	49.544	ENSMALG00000009217	vars2	81	51.217	Monopterus_albus
ENSDORG00000008516	Vars2	93	84.542	MGP_CAROLIEiJ_G0021529	Vars2	93	86.581	Mus_caroli
ENSDORG00000008516	Vars2	93	84.780	ENSMUSG00000038838	Vars2	93	86.397	Mus_musculus
ENSDORG00000008516	Vars2	93	85.493	MGP_PahariEiJ_G0020523	Vars2	93	86.765	Mus_pahari
ENSDORG00000008516	Vars2	93	84.423	MGP_SPRETEiJ_G0022436	Vars2	93	86.213	Mus_spretus
ENSDORG00000008516	Vars2	93	86.564	ENSMPUG00000011643	VARS2	79	86.564	Mustela_putorius_furo
ENSDORG00000008516	Vars2	93	82.235	ENSMLUG00000002356	VARS2	77	82.235	Myotis_lucifugus
ENSDORG00000008516	Vars2	90	81.874	ENSNGAG00000020607	Vars2	78	82.077	Nannospalax_galili
ENSDORG00000008516	Vars2	93	83.373	ENSNLEG00000005625	VARS2	76	83.373	Nomascus_leucogenys
ENSDORG00000008516	Vars2	71	85.294	ENSMEUG00000014475	VARS2	66	85.294	Notamacropus_eugenii
ENSDORG00000008516	Vars2	81	79.945	ENSOPRG00000000682	VARS2	68	80.357	Ochotona_princeps
ENSDORG00000008516	Vars2	93	83.095	ENSODEG00000017965	VARS2	79	83.095	Octodon_degus
ENSDORG00000008516	Vars2	92	33.485	ENSONIG00000004734	vars2	57	56.923	Oreochromis_niloticus
ENSDORG00000008516	Vars2	85	65.969	ENSOANG00000000398	-	93	65.969	Ornithorhynchus_anatinus
ENSDORG00000008516	Vars2	93	78.480	ENSOCUG00000021496	VARS2	51	78.941	Oryctolagus_cuniculus
ENSDORG00000008516	Vars2	93	49.829	ENSORLG00000010632	vars2	80	49.829	Oryzias_latipes
ENSDORG00000008516	Vars2	93	49.714	ENSORLG00020018584	vars2	80	49.714	Oryzias_latipes_hni
ENSDORG00000008516	Vars2	94	49.317	ENSORLG00015010408	vars2	80	49.317	Oryzias_latipes_hsok
ENSDORG00000008516	Vars2	93	50.686	ENSOMEG00000008360	vars2	80	50.686	Oryzias_melastigma
ENSDORG00000008516	Vars2	93	86.770	ENSOGAG00000006087	VARS2	76	86.770	Otolemur_garnettii
ENSDORG00000008516	Vars2	93	85.132	ENSOARG00000010844	VARS2	77	84.982	Ovis_aries
ENSDORG00000008516	Vars2	93	86.977	ENSPPAG00000041141	VARS2	78	86.977	Pan_paniscus
ENSDORG00000008516	Vars2	93	86.619	ENSPPRG00000006751	VARS2	77	86.619	Panthera_pardus
ENSDORG00000008516	Vars2	93	86.499	ENSPTIG00000017799	VARS2	83	86.207	Panthera_tigris_altaica
ENSDORG00000008516	Vars2	93	86.977	ENSPTRG00000034497	VARS2	78	86.977	Pan_troglodytes
ENSDORG00000008516	Vars2	93	87.814	ENSPANG00000018481	VARS2	78	87.916	Papio_anubis
ENSDORG00000008516	Vars2	92	53.129	ENSPKIG00000011372	vars2	79	53.129	Paramormyrops_kingsleyae
ENSDORG00000008516	Vars2	66	65.385	ENSPSIG00000006206	VARS2	87	64.975	Pelodiscus_sinensis
ENSDORG00000008516	Vars2	92	51.684	ENSPMGG00000000465	vars2	81	51.684	Periophthalmus_magnuspinnatus
ENSDORG00000008516	Vars2	93	84.423	ENSPEMG00000014691	Vars2	79	84.423	Peromyscus_maniculatus_bairdii
ENSDORG00000008516	Vars2	94	76.123	ENSPCIG00000015040	VARS2	80	76.123	Phascolarctos_cinereus
ENSDORG00000008516	Vars2	93	50.058	ENSPFOG00000017616	vars2	80	50.058	Poecilia_formosa
ENSDORG00000008516	Vars2	93	49.541	ENSPLAG00000019778	vars2	81	49.541	Poecilia_latipinna
ENSDORG00000008516	Vars2	93	49.656	ENSPMEG00000011123	vars2	80	49.656	Poecilia_mexicana
ENSDORG00000008516	Vars2	84	48.092	ENSPREG00000014998	vars2	77	48.092	Poecilia_reticulata
ENSDORG00000008516	Vars2	93	87.201	ENSPPYG00000016424	VARS2	78	87.201	Pongo_abelii
ENSDORG00000008516	Vars2	85	78.738	ENSPCAG00000006946	VARS2	72	78.738	Procavia_capensis
ENSDORG00000008516	Vars2	94	84.309	ENSPCOG00000014839	VARS2	78	84.309	Propithecus_coquereli
ENSDORG00000008516	Vars2	93	84.726	ENSPVAG00000004197	VARS2	78	84.726	Pteropus_vampyrus
ENSDORG00000008516	Vars2	84	56.746	ENSPNYG00000010314	vars2	87	56.746	Pundamilia_nyererei
ENSDORG00000008516	Vars2	92	52.535	ENSPNAG00000026793	vars2	79	52.535	Pygocentrus_nattereri
ENSDORG00000008516	Vars2	93	84.423	ENSRNOG00000000833	Vars2	79	84.423	Rattus_norvegicus
ENSDORG00000008516	Vars2	93	87.097	ENSRBIG00000032725	VARS2	78	87.097	Rhinopithecus_bieti
ENSDORG00000008516	Vars2	93	86.977	ENSRROG00000043847	VARS2	78	86.977	Rhinopithecus_roxellana
ENSDORG00000008516	Vars2	93	83.759	ENSSBOG00000033240	VARS2	77	84.107	Saimiri_boliviensis_boliviensis
ENSDORG00000008516	Vars2	93	76.259	ENSSHAG00000009307	VARS2	79	76.287	Sarcophilus_harrisii
ENSDORG00000008516	Vars2	93	52.083	ENSSFOG00015016187	vars2	79	52.083	Scleropages_formosus
ENSDORG00000008516	Vars2	92	51.472	ENSSMAG00000020842	vars2	79	51.472	Scophthalmus_maximus
ENSDORG00000008516	Vars2	92	50.755	ENSSDUG00000011598	vars2	80	50.229	Seriola_dumerili
ENSDORG00000008516	Vars2	92	50.883	ENSSLDG00000015492	vars2	81	50.349	Seriola_lalandi_dorsalis
ENSDORG00000008516	Vars2	67	88.462	ENSSARG00000003786	-	65	88.462	Sorex_araneus
ENSDORG00000008516	Vars2	89	59.080	ENSSPUG00000014700	VARS2	80	59.080	Sphenodon_punctatus
ENSDORG00000008516	Vars2	93	47.856	ENSSPAG00000004654	vars2	81	47.569	Stegastes_partitus
ENSDORG00000008516	Vars2	93	87.753	ENSSSCG00000001384	VARS2	79	87.753	Sus_scrofa
ENSDORG00000008516	Vars2	92	51.127	ENSTRUG00000005264	vars2	79	51.687	Takifugu_rubripes
ENSDORG00000008516	Vars2	92	50.766	ENSTNIG00000005916	vars2	79	50.883	Tetraodon_nigroviridis
ENSDORG00000008516	Vars2	80	88.119	ENSTTRG00000012243	VARS2	67	88.119	Tursiops_truncatus
ENSDORG00000008516	Vars2	93	86.326	ENSUAMG00000026124	VARS2	91	86.326	Ursus_americanus
ENSDORG00000008516	Vars2	93	86.564	ENSUMAG00000019894	VARS2	79	86.564	Ursus_maritimus
ENSDORG00000008516	Vars2	93	85.493	ENSVVUG00000010754	VARS2	75	85.493	Vulpes_vulpes
ENSDORG00000008516	Vars2	90	50.242	ENSXETG00000003036	vars2	85	50.242	Xenopus_tropicalis
ENSDORG00000008516	Vars2	89	51.589	ENSXCOG00000003455	vars2	78	51.589	Xiphophorus_couchianus
ENSDORG00000008516	Vars2	93	49.199	ENSXMAG00000013523	vars2	80	49.199	Xiphophorus_maculatus