EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000008664 (Gene tree)
Gene ID: 105984720
Gene Symbol: Prpf3
Alias: 3632413F13Rik
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 36235 bases
Position: chrKN672372.1:11031768-11068002
Accession: 105984720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008132	PRP3	PF08572.10	1.4e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008664	-	2311	XM_013014997	ENSDORP00000008132	634 (aa)	XP_012870451	UPI000BAD23D4
ENSDORT00000025487	-	345	-	ENSDORP00000023522	114 (aa)	-	UPI000BACF3E0

Gene Model

Click here to download ENSDORG00000008664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008664	Prpf3	100	99.685	ENSG00000117360	PRPF3	93	99.685	Homo_sapiens
ENSDORG00000008664	Prpf3	100	71.624	ENSAPOG00000015584	prpf3	93	72.231	Acanthochromis_polyacanthus
ENSDORG00000008664	Prpf3	100	99.527	ENSAMEG00000001630	PRPF3	93	99.527	Ailuropoda_melanoleuca
ENSDORG00000008664	Prpf3	100	71.884	ENSACIG00000007876	prpf3	93	70.821	Amphilophus_citrinellus
ENSDORG00000008664	Prpf3	100	70.973	ENSAOCG00000011449	prpf3	93	72.171	Amphiprion_ocellaris
ENSDORG00000008664	Prpf3	100	70.597	ENSATEG00000023583	prpf3	93	71.057	Anabas_testudineus
ENSDORG00000008664	Prpf3	100	94.488	ENSAPLG00000002440	PRPF3	93	94.488	Anas_platyrhynchos
ENSDORG00000008664	Prpf3	100	91.850	ENSACAG00000003176	PRPF3	93	92.320	Anolis_carolinensis
ENSDORG00000008664	Prpf3	100	99.685	ENSANAG00000026138	PRPF3	93	99.685	Aotus_nancymaae
ENSDORG00000008664	Prpf3	100	72.516	ENSACLG00000020127	prpf3	93	72.205	Astatotilapia_calliptera
ENSDORG00000008664	Prpf3	100	73.676	ENSAMXG00000007306	prpf3	93	73.222	Astyanax_mexicanus
ENSDORG00000008664	Prpf3	100	99.685	ENSBTAG00000013946	PRPF3	93	99.685	Bos_taurus
ENSDORG00000008664	Prpf3	87	38.790	WBGene00010844	prp-3	82	38.929	Caenorhabditis_elegans
ENSDORG00000008664	Prpf3	100	99.685	ENSCJAG00000009926	PRPF3	93	99.685	Callithrix_jacchus
ENSDORG00000008664	Prpf3	100	99.685	ENSCAFG00000011820	PRPF3	93	99.685	Canis_familiaris
ENSDORG00000008664	Prpf3	79	99.799	ENSCAFG00020019653	PRPF3	91	99.799	Canis_lupus_dingo
ENSDORG00000008664	Prpf3	100	99.685	ENSCHIG00000015434	PRPF3	93	99.685	Capra_hircus
ENSDORG00000008664	Prpf3	100	99.054	ENSTSYG00000001383	PRPF3	93	99.054	Carlito_syrichta
ENSDORG00000008664	Prpf3	100	82.334	ENSCAPG00000017812	PRPF3	95	82.808	Cavia_aperea
ENSDORG00000008664	Prpf3	100	99.211	ENSCPOG00000008068	PRPF3	93	99.211	Cavia_porcellus
ENSDORG00000008664	Prpf3	100	99.685	ENSCCAG00000026380	PRPF3	93	99.685	Cebus_capucinus
ENSDORG00000008664	Prpf3	100	83.099	ENSCATG00000041778	PRPF3	92	83.099	Cercocebus_atys
ENSDORG00000008664	Prpf3	100	99.527	ENSCLAG00000015009	PRPF3	93	99.527	Chinchilla_lanigera
ENSDORG00000008664	Prpf3	75	99.645	ENSCHOG00000011645	PRPF3	70	99.645	Choloepus_hoffmanni
ENSDORG00000008664	Prpf3	100	95.906	ENSCPBG00000008216	PRPF3	93	95.906	Chrysemys_picta_bellii
ENSDORG00000008664	Prpf3	65	59.427	ENSCING00000003312	-	99	58.950	Ciona_intestinalis
ENSDORG00000008664	Prpf3	89	54.291	ENSCSAVG00000008720	-	94	54.792	Ciona_savignyi
ENSDORG00000008664	Prpf3	100	98.896	ENSCANG00000036769	PRPF3	93	98.896	Colobus_angolensis_palliatus
ENSDORG00000008664	Prpf3	100	99.685	ENSCGRG00001019100	Prpf3	93	99.685	Cricetulus_griseus_chok1gshd
ENSDORG00000008664	Prpf3	100	99.685	ENSCGRG00000007322	Prpf3	93	99.685	Cricetulus_griseus_crigri
ENSDORG00000008664	Prpf3	99	72.012	ENSCSEG00000002532	prpf3	93	70.651	Cynoglossus_semilaevis
ENSDORG00000008664	Prpf3	100	72.561	ENSCVAG00000009318	prpf3	93	72.256	Cyprinodon_variegatus
ENSDORG00000008664	Prpf3	99	72.894	ENSDARG00000086425	prpf3	93	72.588	Danio_rerio
ENSDORG00000008664	Prpf3	100	88.644	ENSDNOG00000005904	PRPF3	92	89.905	Dasypus_novemcinctus
ENSDORG00000008664	Prpf3	87	53.004	FBgn0036915	Prp3	99	53.188	Drosophila_melanogaster
ENSDORG00000008664	Prpf3	100	98.107	ENSETEG00000019124	PRPF3	93	98.107	Echinops_telfairi
ENSDORG00000008664	Prpf3	100	62.757	ENSEBUG00000011680	prpf3	93	62.610	Eptatretus_burgeri
ENSDORG00000008664	Prpf3	100	99.527	ENSEASG00005001566	PRPF3	93	99.527	Equus_asinus_asinus
ENSDORG00000008664	Prpf3	100	99.685	ENSECAG00000019840	PRPF3	93	99.685	Equus_caballus
ENSDORG00000008664	Prpf3	84	98.913	ENSEEUG00000007338	PRPF3	78	98.913	Erinaceus_europaeus
ENSDORG00000008664	Prpf3	99	65.438	ENSELUG00000013624	prpf3	92	65.491	Esox_lucius
ENSDORG00000008664	Prpf3	100	99.685	ENSFCAG00000013940	PRPF3	93	99.685	Felis_catus
ENSDORG00000008664	Prpf3	100	99.054	ENSFDAG00000010365	PRPF3	93	99.054	Fukomys_damarensis
ENSDORG00000008664	Prpf3	100	73.261	ENSFHEG00000021746	prpf3	93	72.952	Fundulus_heteroclitus
ENSDORG00000008664	Prpf3	99	70.973	ENSGMOG00000008535	prpf3	93	70.821	Gadus_morhua
ENSDORG00000008664	Prpf3	100	94.488	ENSGALG00000028205	PRPF3	93	94.488	Gallus_gallus
ENSDORG00000008664	Prpf3	100	72.111	ENSGAFG00000012671	prpf3	93	71.803	Gambusia_affinis
ENSDORG00000008664	Prpf3	99	70.579	ENSGACG00000011792	prpf3	93	70.884	Gasterosteus_aculeatus
ENSDORG00000008664	Prpf3	100	95.591	ENSGAGG00000013765	PRPF3	100	95.446	Gopherus_agassizii
ENSDORG00000008664	Prpf3	84	99.704	ENSGGOG00000013174	PRPF3	92	99.704	Gorilla_gorilla
ENSDORG00000008664	Prpf3	100	73.023	ENSHBUG00000003493	prpf3	93	72.516	Haplochromis_burtoni
ENSDORG00000008664	Prpf3	92	73.162	ENSHGLG00000016033	-	84	76.165	Heterocephalus_glaber_female
ENSDORG00000008664	Prpf3	100	99.211	ENSHGLG00000016569	PRPF3	93	99.211	Heterocephalus_glaber_female
ENSDORG00000008664	Prpf3	89	75.972	ENSHGLG00100008951	-	85	75.806	Heterocephalus_glaber_male
ENSDORG00000008664	Prpf3	100	99.211	ENSHGLG00100007590	PRPF3	93	99.211	Heterocephalus_glaber_male
ENSDORG00000008664	Prpf3	99	68.598	ENSHCOG00000014058	prpf3	93	68.189	Hippocampus_comes
ENSDORG00000008664	Prpf3	99	73.733	ENSIPUG00000000902	PRPF3	93	73.966	Ictalurus_punctatus
ENSDORG00000008664	Prpf3	100	99.685	ENSSTOG00000001889	PRPF3	93	99.685	Ictidomys_tridecemlineatus
ENSDORG00000008664	Prpf3	100	70.687	ENSKMAG00000001390	prpf3	93	70.382	Kryptolebias_marmoratus
ENSDORG00000008664	Prpf3	100	70.136	ENSLBEG00000026310	prpf3	93	71.017	Labrus_bergylta
ENSDORG00000008664	Prpf3	92	81.973	ENSLACG00000010541	PRPF3	92	82.143	Latimeria_chalumnae
ENSDORG00000008664	Prpf3	100	99.369	ENSLAFG00000004713	PRPF3	93	99.369	Loxodonta_africana
ENSDORG00000008664	Prpf3	100	99.685	ENSMFAG00000039791	PRPF3	93	99.685	Macaca_fascicularis
ENSDORG00000008664	Prpf3	89	99.823	ENSMMUG00000016301	PRPF3	90	99.823	Macaca_mulatta
ENSDORG00000008664	Prpf3	100	99.685	ENSMNEG00000038161	PRPF3	93	99.685	Macaca_nemestrina
ENSDORG00000008664	Prpf3	99	66.139	ENSMLEG00000041065	-	90	64.984	Mandrillus_leucophaeus
ENSDORG00000008664	Prpf3	84	99.704	ENSMLEG00000040609	PRPF3	92	99.704	Mandrillus_leucophaeus
ENSDORG00000008664	Prpf3	100	71.842	ENSMAMG00000014968	prpf3	93	71.689	Mastacembelus_armatus
ENSDORG00000008664	Prpf3	100	70.437	ENSMZEG00005015970	prpf3	93	70.287	Maylandia_zebra
ENSDORG00000008664	Prpf3	100	94.488	ENSMGAG00000000707	PRPF3	93	94.488	Meleagris_gallopavo
ENSDORG00000008664	Prpf3	100	99.369	ENSMAUG00000017112	Prpf3	93	99.369	Mesocricetus_auratus
ENSDORG00000008664	Prpf3	100	99.369	ENSMICG00000015386	PRPF3	100	99.270	Microcebus_murinus
ENSDORG00000008664	Prpf3	100	99.527	ENSMOCG00000000242	Prpf3	93	99.527	Microtus_ochrogaster
ENSDORG00000008664	Prpf3	99	66.261	ENSMMOG00000016131	prpf3	92	66.869	Mola_mola
ENSDORG00000008664	Prpf3	100	97.950	ENSMODG00000018774	PRPF3	93	97.950	Monodelphis_domestica
ENSDORG00000008664	Prpf3	99	70.262	ENSMALG00000007257	prpf3	93	70.570	Monopterus_albus
ENSDORG00000008664	Prpf3	100	99.211	MGP_CAROLIEiJ_G0025354	Prpf3	93	99.211	Mus_caroli
ENSDORG00000008664	Prpf3	100	99.211	ENSMUSG00000015748	Prpf3	93	99.211	Mus_musculus
ENSDORG00000008664	Prpf3	100	99.054	MGP_PahariEiJ_G0026798	Prpf3	93	99.054	Mus_pahari
ENSDORG00000008664	Prpf3	100	99.211	MGP_SPRETEiJ_G0026298	Prpf3	93	99.211	Mus_spretus
ENSDORG00000008664	Prpf3	100	96.057	ENSMPUG00000005080	PRPF3	93	96.057	Mustela_putorius_furo
ENSDORG00000008664	Prpf3	100	99.055	ENSMLUG00000004646	-	93	99.055	Myotis_lucifugus
ENSDORG00000008664	Prpf3	100	99.685	ENSNGAG00000000910	Prpf3	93	99.685	Nannospalax_galili
ENSDORG00000008664	Prpf3	100	70.315	ENSNBRG00000003462	prpf3	93	69.820	Neolamprologus_brichardi
ENSDORG00000008664	Prpf3	89	99.823	ENSNLEG00000009841	PRPF3	92	99.823	Nomascus_leucogenys
ENSDORG00000008664	Prpf3	89	99.558	ENSMEUG00000008733	PRPF3	89	99.558	Notamacropus_eugenii
ENSDORG00000008664	Prpf3	100	99.369	ENSOPRG00000010139	PRPF3	93	99.369	Ochotona_princeps
ENSDORG00000008664	Prpf3	100	98.896	ENSODEG00000011363	-	93	98.896	Octodon_degus
ENSDORG00000008664	Prpf3	97	75.723	ENSODEG00000014412	-	93	75.723	Octodon_degus
ENSDORG00000008664	Prpf3	100	70.588	ENSONIG00000006394	prpf3	93	70.437	Oreochromis_niloticus
ENSDORG00000008664	Prpf3	100	65.008	ENSOANG00000015441	PRPF3	93	64.697	Ornithorhynchus_anatinus
ENSDORG00000008664	Prpf3	100	99.685	ENSOCUG00000011760	PRPF3	93	99.685	Oryctolagus_cuniculus
ENSDORG00000008664	Prpf3	99	72.699	ENSORLG00000010330	prpf3	93	71.626	Oryzias_latipes
ENSDORG00000008664	Prpf3	99	72.699	ENSORLG00020009054	prpf3	93	71.626	Oryzias_latipes_hni
ENSDORG00000008664	Prpf3	99	72.477	ENSORLG00015015016	prpf3	93	71.407	Oryzias_latipes_hsok
ENSDORG00000008664	Prpf3	100	71.957	ENSOMEG00000000940	prpf3	93	71.649	Oryzias_melastigma
ENSDORG00000008664	Prpf3	100	93.071	ENSOGAG00000005352	PRPF3	93	93.071	Otolemur_garnettii
ENSDORG00000008664	Prpf3	100	99.685	ENSOARG00000020798	PRPF3	93	99.685	Ovis_aries
ENSDORG00000008664	Prpf3	100	99.527	ENSPPAG00000030983	PRPF3	93	99.527	Pan_paniscus
ENSDORG00000008664	Prpf3	99	76.911	ENSPPAG00000043769	-	93	76.433	Pan_paniscus
ENSDORG00000008664	Prpf3	100	99.685	ENSPPRG00000000731	PRPF3	93	99.685	Panthera_pardus
ENSDORG00000008664	Prpf3	100	99.685	ENSPTIG00000005516	PRPF3	93	99.685	Panthera_tigris_altaica
ENSDORG00000008664	Prpf3	100	99.685	ENSPTRG00000001254	PRPF3	93	99.685	Pan_troglodytes
ENSDORG00000008664	Prpf3	99	75.955	ENSPTRG00000047819	-	93	75.478	Pan_troglodytes
ENSDORG00000008664	Prpf3	100	99.527	ENSPANG00000000499	PRPF3	93	99.527	Papio_anubis
ENSDORG00000008664	Prpf3	100	74.233	ENSPKIG00000010501	prpf3	93	74.387	Paramormyrops_kingsleyae
ENSDORG00000008664	Prpf3	100	95.591	ENSPSIG00000014877	PRPF3	93	95.433	Pelodiscus_sinensis
ENSDORG00000008664	Prpf3	100	66.978	ENSPMGG00000007776	prpf3	92	66.044	Periophthalmus_magnuspinnatus
ENSDORG00000008664	Prpf3	100	99.685	ENSPEMG00000011672	Prpf3	93	99.685	Peromyscus_maniculatus_bairdii
ENSDORG00000008664	Prpf3	68	72.146	ENSPMAG00000005588	prpf3	99	69.757	Petromyzon_marinus
ENSDORG00000008664	Prpf3	100	97.950	ENSPCIG00000008795	PRPF3	93	97.950	Phascolarctos_cinereus
ENSDORG00000008664	Prpf3	100	72.146	ENSPFOG00000013638	prpf3	93	71.537	Poecilia_formosa
ENSDORG00000008664	Prpf3	100	72.573	ENSPLAG00000018103	prpf3	93	72.111	Poecilia_latipinna
ENSDORG00000008664	Prpf3	100	72.265	ENSPMEG00000023546	prpf3	93	71.803	Poecilia_mexicana
ENSDORG00000008664	Prpf3	100	71.957	ENSPREG00000017216	prpf3	93	71.649	Poecilia_reticulata
ENSDORG00000008664	Prpf3	74	86.966	ENSPPYG00000018646	-	91	86.966	Pongo_abelii
ENSDORG00000008664	Prpf3	92	99.659	ENSPPYG00000000900	PRPF3	92	99.659	Pongo_abelii
ENSDORG00000008664	Prpf3	93	98.646	ENSPCAG00000014908	PRPF3	87	98.646	Procavia_capensis
ENSDORG00000008664	Prpf3	100	99.527	ENSPCOG00000013828	PRPF3	93	99.527	Propithecus_coquereli
ENSDORG00000008664	Prpf3	100	98.738	ENSPVAG00000013472	PRPF3	93	98.738	Pteropus_vampyrus
ENSDORG00000008664	Prpf3	100	73.023	ENSPNYG00000004279	prpf3	93	72.516	Pundamilia_nyererei
ENSDORG00000008664	Prpf3	100	72.920	ENSPNAG00000001799	prpf3	93	73.071	Pygocentrus_nattereri
ENSDORG00000008664	Prpf3	100	99.054	ENSRNOG00000025629	Prpf3	93	99.054	Rattus_norvegicus
ENSDORG00000008664	Prpf3	82	95.745	ENSRBIG00000028854	PRPF3	90	95.745	Rhinopithecus_bieti
ENSDORG00000008664	Prpf3	100	99.685	ENSRROG00000027464	PRPF3	93	99.685	Rhinopithecus_roxellana
ENSDORG00000008664	Prpf3	100	92.114	ENSSBOG00000033104	PRPF3	92	92.114	Saimiri_boliviensis_boliviensis
ENSDORG00000008664	Prpf3	100	97.950	ENSSHAG00000009548	PRPF3	93	97.950	Sarcophilus_harrisii
ENSDORG00000008664	Prpf3	100	74.169	ENSSFOG00015022014	prpf3	93	73.716	Scleropages_formosus
ENSDORG00000008664	Prpf3	100	71.687	ENSSMAG00000015739	prpf3	93	71.386	Scophthalmus_maximus
ENSDORG00000008664	Prpf3	100	68.673	ENSSDUG00000006840	prpf3	92	68.673	Seriola_dumerili
ENSDORG00000008664	Prpf3	100	70.721	ENSSLDG00000015423	prpf3	93	71.171	Seriola_lalandi_dorsalis
ENSDORG00000008664	Prpf3	100	99.054	ENSSARG00000011064	PRPF3	93	99.054	Sorex_araneus
ENSDORG00000008664	Prpf3	100	91.938	ENSSPUG00000000809	PRPF3	93	91.938	Sphenodon_punctatus
ENSDORG00000008664	Prpf3	100	70.973	ENSSPAG00000018721	prpf3	93	71.884	Stegastes_partitus
ENSDORG00000008664	Prpf3	100	99.685	ENSSSCG00000030119	PRPF3	100	99.635	Sus_scrofa
ENSDORG00000008664	Prpf3	100	79.528	ENSTGUG00000004552	PRPF3	93	79.528	Taeniopygia_guttata
ENSDORG00000008664	Prpf3	99	70.872	ENSTRUG00000014923	prpf3	92	70.561	Takifugu_rubripes
ENSDORG00000008664	Prpf3	100	72.409	ENSTNIG00000008058	prpf3	93	71.145	Tetraodon_nigroviridis
ENSDORG00000008664	Prpf3	88	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSDORG00000008664	Prpf3	100	92.902	ENSTTRG00000010616	PRPF3	93	92.902	Tursiops_truncatus
ENSDORG00000008664	Prpf3	86	99.635	ENSUAMG00000009345	PRPF3	100	99.635	Ursus_americanus
ENSDORG00000008664	Prpf3	100	99.685	ENSUMAG00000003720	PRPF3	93	99.685	Ursus_maritimus
ENSDORG00000008664	Prpf3	88	100.000	ENSVPAG00000005425	PRPF3	82	100.000	Vicugna_pacos
ENSDORG00000008664	Prpf3	100	99.685	ENSVVUG00000007933	PRPF3	93	99.685	Vulpes_vulpes
ENSDORG00000008664	Prpf3	100	87.324	ENSXETG00000018654	prpf3	93	87.324	Xenopus_tropicalis
ENSDORG00000008664	Prpf3	100	72.265	ENSXMAG00000016347	prpf3	93	71.803	Xiphophorus_maculatus