EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000008697 (Gene tree)
Gene ID: 106001310
Gene Symbol: Zc3hc1
Alias: 1110054L24Rik|HSPC216|Nipa
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 27509 bases
Position: chrKN672631.1:701532-729040
Accession: 106001310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008167	zf-C3HC	PF07967.13	3.7e-30	1	1
ENSDORP00000026502	zf-C3HC	PF07967.13	8e-30	1	1
ENSDORP00000025819	zf-C3HC	PF07967.13	9.5e-28	1	1
ENSDORP00000026502	Rsm1	PF08600.10	4.4e-16	1	1
ENSDORP00000025819	Rsm1	PF08600.10	4.5e-16	1	1
ENSDORP00000008167	Rsm1	PF08600.10	8.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008699	-	1182	-	ENSDORP00000008167	393 (aa)	-	UPI000BAD157B
ENSDORT00000028108	-	1395	XM_013036415	ENSDORP00000026502	464 (aa)	XP_012891869	UPI000BAD100A
ENSDORT00000036199	-	1404	-	ENSDORP00000025819	467 (aa)	-	UPI000BAD04F9

Gene Model

Click here to download ENSDORG00000008697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008697	Zc3hc1	99	78.643	ENSG00000091732	ZC3HC1	99	78.643	Homo_sapiens
ENSDORG00000008697	Zc3hc1	94	43.605	ENSAPOG00000009078	zc3hc1	95	41.837	Acanthochromis_polyacanthus
ENSDORG00000008697	Zc3hc1	100	78.770	ENSAMEG00000005425	ZC3HC1	100	78.770	Ailuropoda_melanoleuca
ENSDORG00000008697	Zc3hc1	85	50.000	ENSACIG00000019513	zc3hc1	84	44.394	Amphilophus_citrinellus
ENSDORG00000008697	Zc3hc1	93	43.605	ENSAOCG00000024310	zc3hc1	95	42.159	Amphiprion_ocellaris
ENSDORG00000008697	Zc3hc1	93	43.605	ENSAPEG00000004907	zc3hc1	95	42.159	Amphiprion_percula
ENSDORG00000008697	Zc3hc1	84	46.287	ENSATEG00000016898	zc3hc1	81	46.683	Anabas_testudineus
ENSDORG00000008697	Zc3hc1	89	60.287	ENSAPLG00000003832	ZC3HC1	93	60.287	Anas_platyrhynchos
ENSDORG00000008697	Zc3hc1	94	56.122	ENSACAG00000001638	ZC3HC1	95	56.122	Anolis_carolinensis
ENSDORG00000008697	Zc3hc1	100	77.932	ENSANAG00000022213	ZC3HC1	99	83.415	Aotus_nancymaae
ENSDORG00000008697	Zc3hc1	87	47.331	ENSACLG00000025033	zc3hc1	91	43.498	Astatotilapia_calliptera
ENSDORG00000008697	Zc3hc1	94	41.597	ENSAMXG00000036792	zc3hc1	97	41.387	Astyanax_mexicanus
ENSDORG00000008697	Zc3hc1	100	78.088	ENSBTAG00000011247	ZC3HC1	100	78.088	Bos_taurus
ENSDORG00000008697	Zc3hc1	100	78.287	ENSCJAG00000010536	ZC3HC1	99	83.415	Callithrix_jacchus
ENSDORG00000008697	Zc3hc1	100	79.283	ENSCAFG00000028735	-	100	79.283	Canis_familiaris
ENSDORG00000008697	Zc3hc1	100	79.283	ENSCAFG00000029401	-	99	79.283	Canis_familiaris
ENSDORG00000008697	Zc3hc1	100	79.681	ENSCAFG00000031850	-	100	79.681	Canis_familiaris
ENSDORG00000008697	Zc3hc1	100	79.208	ENSCAFG00000001499	-	99	79.208	Canis_familiaris
ENSDORG00000008697	Zc3hc1	100	79.482	ENSCAFG00020006829	-	100	79.482	Canis_lupus_dingo
ENSDORG00000008697	Zc3hc1	100	78.175	ENSCAFG00020023333	-	100	78.175	Canis_lupus_dingo
ENSDORG00000008697	Zc3hc1	100	75.764	ENSCHIG00000014103	ZC3HC1	100	75.764	Capra_hircus
ENSDORG00000008697	Zc3hc1	100	76.892	ENSTSYG00000002843	ZC3HC1	100	76.892	Carlito_syrichta
ENSDORG00000008697	Zc3hc1	97	58.057	ENSCAPG00000016300	ZC3HC1	100	56.954	Cavia_aperea
ENSDORG00000008697	Zc3hc1	100	73.705	ENSCPOG00000014034	ZC3HC1	100	73.108	Cavia_porcellus
ENSDORG00000008697	Zc3hc1	100	66.667	ENSCCAG00000020384	ZC3HC1	100	84.581	Cebus_capucinus
ENSDORG00000008697	Zc3hc1	100	78.685	ENSCATG00000023130	ZC3HC1	97	83.880	Cercocebus_atys
ENSDORG00000008697	Zc3hc1	100	63.441	ENSCLAG00000008260	ZC3HC1	100	63.656	Chinchilla_lanigera
ENSDORG00000008697	Zc3hc1	79	84.153	ENSCSAG00000009881	ZC3HC1	97	84.153	Chlorocebus_sabaeus
ENSDORG00000008697	Zc3hc1	89	84.504	ENSCHOG00000011846	ZC3HC1	91	84.504	Choloepus_hoffmanni
ENSDORG00000008697	Zc3hc1	96	61.728	ENSCPBG00000017519	ZC3HC1	100	60.913	Chrysemys_picta_bellii
ENSDORG00000008697	Zc3hc1	100	78.486	ENSCANG00000029091	ZC3HC1	99	82.927	Colobus_angolensis_palliatus
ENSDORG00000008697	Zc3hc1	100	76.892	ENSCGRG00001018805	Zc3hc1	100	76.892	Cricetulus_griseus_chok1gshd
ENSDORG00000008697	Zc3hc1	100	76.048	ENSCGRG00000017114	Zc3hc1	100	76.048	Cricetulus_griseus_crigri
ENSDORG00000008697	Zc3hc1	94	41.582	ENSCSEG00000009284	zc3hc1	93	41.582	Cynoglossus_semilaevis
ENSDORG00000008697	Zc3hc1	93	42.012	ENSCVAG00000011566	zc3hc1	95	40.286	Cyprinodon_variegatus
ENSDORG00000008697	Zc3hc1	96	44.534	ENSDARG00000062651	zc3hc1	97	44.534	Danio_rerio
ENSDORG00000008697	Zc3hc1	100	77.689	ENSDNOG00000045016	ZC3HC1	100	77.689	Dasypus_novemcinctus
ENSDORG00000008697	Zc3hc1	90	86.058	ENSEASG00005008789	ZC3HC1	89	86.058	Equus_asinus_asinus
ENSDORG00000008697	Zc3hc1	100	79.324	ENSECAG00000017886	ZC3HC1	100	79.324	Equus_caballus
ENSDORG00000008697	Zc3hc1	82	78.882	ENSEEUG00000003123	ZC3HC1	83	78.882	Erinaceus_europaeus
ENSDORG00000008697	Zc3hc1	88	45.057	ENSELUG00000023168	zc3hc1	83	46.224	Esox_lucius
ENSDORG00000008697	Zc3hc1	100	78.287	ENSFCAG00000010429	ZC3HC1	100	78.287	Felis_catus
ENSDORG00000008697	Zc3hc1	88	60.606	ENSFALG00000005006	ZC3HC1	91	59.251	Ficedula_albicollis
ENSDORG00000008697	Zc3hc1	100	74.701	ENSFDAG00000019897	ZC3HC1	100	74.701	Fukomys_damarensis
ENSDORG00000008697	Zc3hc1	95	41.818	ENSFHEG00000020149	zc3hc1	96	40.447	Fundulus_heteroclitus
ENSDORG00000008697	Zc3hc1	83	51.575	ENSGMOG00000002914	zc3hc1	84	44.524	Gadus_morhua
ENSDORG00000008697	Zc3hc1	100	55.842	ENSGALG00000008003	ZC3HC1	100	55.842	Gallus_gallus
ENSDORG00000008697	Zc3hc1	95	40.650	ENSGAFG00000016095	zc3hc1	96	40.688	Gambusia_affinis
ENSDORG00000008697	Zc3hc1	88	50.575	ENSGACG00000019706	zc3hc1	85	44.725	Gasterosteus_aculeatus
ENSDORG00000008697	Zc3hc1	84	67.519	ENSGAGG00000016106	ZC3HC1	100	67.519	Gopherus_agassizii
ENSDORG00000008697	Zc3hc1	99	78.443	ENSGGOG00000015504	ZC3HC1	98	83.824	Gorilla_gorilla
ENSDORG00000008697	Zc3hc1	87	47.687	ENSHBUG00000008347	zc3hc1	83	43.891	Haplochromis_burtoni
ENSDORG00000008697	Zc3hc1	100	75.697	ENSHGLG00000005085	ZC3HC1	100	75.697	Heterocephalus_glaber_female
ENSDORG00000008697	Zc3hc1	100	75.498	ENSHGLG00100011395	ZC3HC1	100	75.498	Heterocephalus_glaber_male
ENSDORG00000008697	Zc3hc1	94	40.501	ENSHCOG00000014309	zc3hc1	95	41.042	Hippocampus_comes
ENSDORG00000008697	Zc3hc1	100	79.283	ENSSTOG00000023599	-	100	79.283	Ictidomys_tridecemlineatus
ENSDORG00000008697	Zc3hc1	94	43.648	ENSKMAG00000015315	zc3hc1	89	43.443	Kryptolebias_marmoratus
ENSDORG00000008697	Zc3hc1	86	47.203	ENSLBEG00000017325	zc3hc1	88	43.964	Labrus_bergylta
ENSDORG00000008697	Zc3hc1	77	51.707	ENSLACG00000013032	ZC3HC1	97	50.120	Latimeria_chalumnae
ENSDORG00000008697	Zc3hc1	97	51.506	ENSLOCG00000015963	zc3hc1	98	49.698	Lepisosteus_oculatus
ENSDORG00000008697	Zc3hc1	100	75.889	ENSLAFG00000001292	ZC3HC1	100	75.889	Loxodonta_africana
ENSDORG00000008697	Zc3hc1	100	78.884	ENSMFAG00000030176	ZC3HC1	97	84.110	Macaca_fascicularis
ENSDORG00000008697	Zc3hc1	100	78.529	ENSMMUG00000006155	ZC3HC1	99	84.615	Macaca_mulatta
ENSDORG00000008697	Zc3hc1	100	79.084	ENSMNEG00000011833	ZC3HC1	100	84.434	Macaca_nemestrina
ENSDORG00000008697	Zc3hc1	100	78.884	ENSMLEG00000027328	ZC3HC1	98	84.426	Mandrillus_leucophaeus
ENSDORG00000008697	Zc3hc1	95	43.228	ENSMAMG00000010691	zc3hc1	96	41.717	Mastacembelus_armatus
ENSDORG00000008697	Zc3hc1	87	47.331	ENSMZEG00005007142	zc3hc1	83	43.665	Maylandia_zebra
ENSDORG00000008697	Zc3hc1	100	54.795	ENSMGAG00000002977	ZC3HC1	100	55.382	Meleagris_gallopavo
ENSDORG00000008697	Zc3hc1	92	74.942	ENSMAUG00000017032	Zc3hc1	95	74.942	Mesocricetus_auratus
ENSDORG00000008697	Zc3hc1	100	77.888	ENSMICG00000009167	ZC3HC1	100	77.888	Microcebus_murinus
ENSDORG00000008697	Zc3hc1	100	77.291	ENSMOCG00000015239	Zc3hc1	100	77.291	Microtus_ochrogaster
ENSDORG00000008697	Zc3hc1	88	47.490	ENSMMOG00000002204	zc3hc1	96	42.273	Mola_mola
ENSDORG00000008697	Zc3hc1	100	60.996	ENSMODG00000014630	ZC3HC1	100	59.336	Monodelphis_domestica
ENSDORG00000008697	Zc3hc1	85	49.117	ENSMALG00000014447	zc3hc1	96	41.833	Monopterus_albus
ENSDORG00000008697	Zc3hc1	100	76.693	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	76.693	Mus_caroli
ENSDORG00000008697	Zc3hc1	100	76.494	ENSMUSG00000039130	Zc3hc1	100	76.494	Mus_musculus
ENSDORG00000008697	Zc3hc1	100	69.323	MGP_PahariEiJ_G0021941	Zc3hc1	100	69.323	Mus_pahari
ENSDORG00000008697	Zc3hc1	100	76.295	MGP_SPRETEiJ_G0029183	Zc3hc1	100	76.295	Mus_spretus
ENSDORG00000008697	Zc3hc1	95	78.288	ENSMPUG00000005297	ZC3HC1	95	78.288	Mustela_putorius_furo
ENSDORG00000008697	Zc3hc1	100	76.832	ENSMLUG00000000063	-	100	76.832	Myotis_lucifugus
ENSDORG00000008697	Zc3hc1	73	76.023	ENSMLUG00000029228	-	97	77.313	Myotis_lucifugus
ENSDORG00000008697	Zc3hc1	100	76.740	ENSNGAG00000019014	Zc3hc1	100	76.740	Nannospalax_galili
ENSDORG00000008697	Zc3hc1	84	50.000	ENSNBRG00000004577	zc3hc1	83	44.191	Neolamprologus_brichardi
ENSDORG00000008697	Zc3hc1	99	78.044	ENSNLEG00000012698	ZC3HC1	97	83.196	Nomascus_leucogenys
ENSDORG00000008697	Zc3hc1	98	69.980	ENSMEUG00000011023	ZC3HC1	98	69.980	Notamacropus_eugenii
ENSDORG00000008697	Zc3hc1	73	68.872	ENSOPRG00000007867	-	68	68.872	Ochotona_princeps
ENSDORG00000008697	Zc3hc1	100	73.506	ENSODEG00000014604	ZC3HC1	100	73.307	Octodon_degus
ENSDORG00000008697	Zc3hc1	87	48.043	ENSONIG00000011644	zc3hc1	80	48.043	Oreochromis_niloticus
ENSDORG00000008697	Zc3hc1	91	64.651	ENSOANG00000011460	ZC3HC1	93	64.651	Ornithorhynchus_anatinus
ENSDORG00000008697	Zc3hc1	100	75.248	ENSOCUG00000017137	ZC3HC1	100	75.248	Oryctolagus_cuniculus
ENSDORG00000008697	Zc3hc1	94	41.443	ENSORLG00000014409	zc3hc1	95	40.974	Oryzias_latipes
ENSDORG00000008697	Zc3hc1	94	41.237	ENSORLG00020015874	zc3hc1	95	40.771	Oryzias_latipes_hni
ENSDORG00000008697	Zc3hc1	94	41.116	ENSORLG00015014641	zc3hc1	95	40.650	Oryzias_latipes_hsok
ENSDORG00000008697	Zc3hc1	94	43.008	ENSOMEG00000000215	zc3hc1	95	42.620	Oryzias_melastigma
ENSDORG00000008697	Zc3hc1	94	42.797	ENSOMEG00000020604	zc3hc1	95	42.827	Oryzias_melastigma
ENSDORG00000008697	Zc3hc1	100	72.800	ENSOGAG00000026193	ZC3HC1	100	73.000	Otolemur_garnettii
ENSDORG00000008697	Zc3hc1	100	78.614	ENSOARG00000004907	ZC3HC1	99	78.614	Ovis_aries
ENSDORG00000008697	Zc3hc1	99	78.643	ENSPPAG00000043172	ZC3HC1	98	83.824	Pan_paniscus
ENSDORG00000008697	Zc3hc1	100	77.490	ENSPPRG00000001004	ZC3HC1	100	77.490	Panthera_pardus
ENSDORG00000008697	Zc3hc1	100	78.088	ENSPTIG00000007823	ZC3HC1	100	78.088	Panthera_tigris_altaica
ENSDORG00000008697	Zc3hc1	99	78.643	ENSPTRG00000019685	ZC3HC1	98	83.824	Pan_troglodytes
ENSDORG00000008697	Zc3hc1	100	77.535	ENSPANG00000014229	ZC3HC1	99	83.415	Papio_anubis
ENSDORG00000008697	Zc3hc1	93	46.667	ENSPKIG00000007172	zc3hc1	95	45.303	Paramormyrops_kingsleyae
ENSDORG00000008697	Zc3hc1	88	67.480	ENSPSIG00000016646	ZC3HC1	84	60.941	Pelodiscus_sinensis
ENSDORG00000008697	Zc3hc1	94	41.935	ENSPMGG00000003548	zc3hc1	96	42.680	Periophthalmus_magnuspinnatus
ENSDORG00000008697	Zc3hc1	100	76.295	ENSPEMG00000000514	Zc3hc1	100	76.295	Peromyscus_maniculatus_bairdii
ENSDORG00000008697	Zc3hc1	97	72.304	ENSPCIG00000020619	ZC3HC1	100	76.350	Phascolarctos_cinereus
ENSDORG00000008697	Zc3hc1	95	40.530	ENSPFOG00000003466	zc3hc1	96	40.568	Poecilia_formosa
ENSDORG00000008697	Zc3hc1	95	39.919	ENSPLAG00000022211	zc3hc1	96	39.634	Poecilia_latipinna
ENSDORG00000008697	Zc3hc1	95	40.447	ENSPMEG00000001458	zc3hc1	96	40.486	Poecilia_mexicana
ENSDORG00000008697	Zc3hc1	95	40.974	ENSPREG00000004004	zc3hc1	96	40.688	Poecilia_reticulata
ENSDORG00000008697	Zc3hc1	99	72.510	ENSPPYG00000017998	ZC3HC1	99	72.510	Pongo_abelii
ENSDORG00000008697	Zc3hc1	90	81.010	ENSPCAG00000001182	ZC3HC1	90	81.010	Procavia_capensis
ENSDORG00000008697	Zc3hc1	100	78.088	ENSPCOG00000017354	ZC3HC1	100	78.088	Propithecus_coquereli
ENSDORG00000008697	Zc3hc1	100	73.108	ENSPVAG00000003195	ZC3HC1	100	73.108	Pteropus_vampyrus
ENSDORG00000008697	Zc3hc1	87	47.331	ENSPNYG00000020692	zc3hc1	83	43.665	Pundamilia_nyererei
ENSDORG00000008697	Zc3hc1	91	46.988	ENSPNAG00000020746	zc3hc1	95	43.067	Pygocentrus_nattereri
ENSDORG00000008697	Zc3hc1	100	74.354	ENSRNOG00000010154	Zc3hc1	100	74.354	Rattus_norvegicus
ENSDORG00000008697	Zc3hc1	90	85.817	ENSRBIG00000029409	ZC3HC1	100	83.019	Rhinopithecus_bieti
ENSDORG00000008697	Zc3hc1	100	78.486	ENSRROG00000041831	ZC3HC1	99	82.439	Rhinopithecus_roxellana
ENSDORG00000008697	Zc3hc1	100	67.442	ENSSBOG00000032787	ZC3HC1	99	83.902	Saimiri_boliviensis_boliviensis
ENSDORG00000008697	Zc3hc1	91	76.540	ENSSHAG00000002529	ZC3HC1	99	71.739	Sarcophilus_harrisii
ENSDORG00000008697	Zc3hc1	97	51.399	ENSSFOG00015003667	zc3hc1	87	49.247	Scleropages_formosus
ENSDORG00000008697	Zc3hc1	85	51.163	ENSSMAG00000000647	zc3hc1	74	46.099	Scophthalmus_maximus
ENSDORG00000008697	Zc3hc1	87	51.429	ENSSDUG00000004241	zc3hc1	82	47.454	Seriola_dumerili
ENSDORG00000008697	Zc3hc1	94	44.444	ENSSLDG00000025056	zc3hc1	94	42.857	Seriola_lalandi_dorsalis
ENSDORG00000008697	Zc3hc1	99	68.663	ENSSARG00000012013	ZC3HC1	99	68.663	Sorex_araneus
ENSDORG00000008697	Zc3hc1	86	58.416	ENSSPUG00000000778	ZC3HC1	79	58.416	Sphenodon_punctatus
ENSDORG00000008697	Zc3hc1	94	43.149	ENSSPAG00000020041	zc3hc1	95	43.177	Stegastes_partitus
ENSDORG00000008697	Zc3hc1	100	77.888	ENSSSCG00000016565	ZC3HC1	100	83.290	Sus_scrofa
ENSDORG00000008697	Zc3hc1	51	57.025	ENSTGUG00000016262	ZC3HC1	97	57.025	Taeniopygia_guttata
ENSDORG00000008697	Zc3hc1	87	52.778	ENSTRUG00000020077	zc3hc1	86	44.545	Takifugu_rubripes
ENSDORG00000008697	Zc3hc1	89	51.273	ENSTNIG00000007585	zc3hc1	90	45.538	Tetraodon_nigroviridis
ENSDORG00000008697	Zc3hc1	89	81.319	ENSTBEG00000005216	ZC3HC1	82	81.319	Tupaia_belangeri
ENSDORG00000008697	Zc3hc1	95	78.750	ENSTTRG00000008458	ZC3HC1	100	78.750	Tursiops_truncatus
ENSDORG00000008697	Zc3hc1	100	79.681	ENSUAMG00000020249	ZC3HC1	100	79.681	Ursus_americanus
ENSDORG00000008697	Zc3hc1	100	79.283	ENSUMAG00000009268	ZC3HC1	100	79.283	Ursus_maritimus
ENSDORG00000008697	Zc3hc1	89	81.633	ENSVPAG00000010846	ZC3HC1	77	81.633	Vicugna_pacos
ENSDORG00000008697	Zc3hc1	95	78.750	ENSVVUG00000012386	ZC3HC1	99	78.750	Vulpes_vulpes
ENSDORG00000008697	Zc3hc1	91	48.283	ENSXETG00000033900	zc3hc1	95	48.283	Xenopus_tropicalis
ENSDORG00000008697	Zc3hc1	95	40.612	ENSXCOG00000013570	zc3hc1	96	40.650	Xiphophorus_couchianus
ENSDORG00000008697	Zc3hc1	90	44.240	ENSXMAG00000010979	zc3hc1	91	44.266	Xiphophorus_maculatus