EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000008788 (Gene tree)
Gene ID: 105986021
Gene Symbol: Yrdc
Alias: IRIP
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 3178 bases
Position: chrKN672379.1:380561-383738
Accession: 105986021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008244	Sua5_yciO_yrdC	PF01300.18	2.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008784	-	681	XM_013016761	ENSDORP00000008244	226 (aa)	XP_012872215	UPI000BAD20A0

Gene Model

Click here to download ENSDORG00000008788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008788	Yrdc	86	92.308	ENSG00000196449	YRDC	70	92.308	Homo_sapiens
ENSDORG00000008788	Yrdc	86	63.402	ENSAPOG00000024293	yrdc	73	63.402	Acanthochromis_polyacanthus
ENSDORG00000008788	Yrdc	83	89.840	ENSAMEG00000001173	YRDC	99	89.840	Ailuropoda_melanoleuca
ENSDORG00000008788	Yrdc	88	65.152	ENSACIG00000017330	yrdc	73	65.152	Amphilophus_citrinellus
ENSDORG00000008788	Yrdc	86	63.918	ENSAOCG00000021647	yrdc	73	63.918	Amphiprion_ocellaris
ENSDORG00000008788	Yrdc	86	63.918	ENSAPEG00000006164	yrdc	73	63.918	Amphiprion_percula
ENSDORG00000008788	Yrdc	84	67.196	ENSATEG00000010086	yrdc	70	67.196	Anabas_testudineus
ENSDORG00000008788	Yrdc	85	66.839	ENSACAG00000017203	YRDC	91	66.839	Anolis_carolinensis
ENSDORG00000008788	Yrdc	86	87.817	ENSANAG00000031052	-	72	87.817	Aotus_nancymaae
ENSDORG00000008788	Yrdc	86	92.308	ENSANAG00000028788	-	83	92.308	Aotus_nancymaae
ENSDORG00000008788	Yrdc	84	65.608	ENSACLG00000027775	yrdc	69	65.608	Astatotilapia_calliptera
ENSDORG00000008788	Yrdc	96	59.722	ENSAMXG00000037791	yrdc	79	59.722	Astyanax_mexicanus
ENSDORG00000008788	Yrdc	99	73.551	ENSBTAG00000006510	YRDC	99	73.551	Bos_taurus
ENSDORG00000008788	Yrdc	84	40.933	WBGene00012997	Y48C3A.18	97	39.516	Caenorhabditis_elegans
ENSDORG00000008788	Yrdc	86	92.821	ENSCJAG00000002078	YRDC	54	92.821	Callithrix_jacchus
ENSDORG00000008788	Yrdc	87	86.802	ENSCAFG00000003253	YRDC	99	69.485	Canis_familiaris
ENSDORG00000008788	Yrdc	87	87.817	ENSCAFG00020007843	YRDC	99	70.588	Canis_lupus_dingo
ENSDORG00000008788	Yrdc	99	72.101	ENSCHIG00000007882	YRDC	99	72.101	Capra_hircus
ENSDORG00000008788	Yrdc	79	92.179	ENSTSYG00000005555	YRDC	64	92.179	Carlito_syrichta
ENSDORG00000008788	Yrdc	87	88.832	ENSCPOG00000036144	YRDC	70	88.832	Cavia_porcellus
ENSDORG00000008788	Yrdc	86	92.821	ENSCCAG00000028891	YRDC	70	92.821	Cebus_capucinus
ENSDORG00000008788	Yrdc	86	91.282	ENSCATG00000036928	YRDC	70	91.282	Cercocebus_atys
ENSDORG00000008788	Yrdc	99	90.355	ENSCLAG00000015012	YRDC	70	90.355	Chinchilla_lanigera
ENSDORG00000008788	Yrdc	86	91.282	ENSCSAG00000001116	YRDC	70	91.282	Chlorocebus_sabaeus
ENSDORG00000008788	Yrdc	56	87.302	ENSCHOG00000005500	YRDC	60	87.302	Choloepus_hoffmanni
ENSDORG00000008788	Yrdc	87	68.020	ENSCPBG00000018446	YRDC	84	68.020	Chrysemys_picta_bellii
ENSDORG00000008788	Yrdc	84	51.515	ENSCING00000007564	-	91	51.515	Ciona_intestinalis
ENSDORG00000008788	Yrdc	84	50.510	ENSCSAVG00000009982	-	91	50.510	Ciona_savignyi
ENSDORG00000008788	Yrdc	86	92.308	ENSCANG00000031111	YRDC	70	92.308	Colobus_angolensis_palliatus
ENSDORG00000008788	Yrdc	87	91.878	ENSCGRG00001014496	-	70	91.878	Cricetulus_griseus_chok1gshd
ENSDORG00000008788	Yrdc	98	69.517	ENSCGRG00001000829	-	77	69.630	Cricetulus_griseus_chok1gshd
ENSDORG00000008788	Yrdc	56	92.913	ENSCGRG00000001307	-	100	92.913	Cricetulus_griseus_crigri
ENSDORG00000008788	Yrdc	84	64.550	ENSCSEG00000019075	yrdc	68	64.550	Cynoglossus_semilaevis
ENSDORG00000008788	Yrdc	84	62.434	ENSCVAG00000017355	yrdc	70	62.434	Cyprinodon_variegatus
ENSDORG00000008788	Yrdc	85	62.051	ENSDARG00000041428	yrdc	81	62.051	Danio_rerio
ENSDORG00000008788	Yrdc	87	88.776	ENSDNOG00000038789	-	70	88.776	Dasypus_novemcinctus
ENSDORG00000008788	Yrdc	85	63.731	ENSDNOG00000036198	-	93	63.731	Dasypus_novemcinctus
ENSDORG00000008788	Yrdc	84	47.917	FBgn0061361	CG33786	77	47.917	Drosophila_melanogaster
ENSDORG00000008788	Yrdc	87	72.081	ENSETEG00000003442	YRDC	70	72.081	Echinops_telfairi
ENSDORG00000008788	Yrdc	85	56.477	ENSEBUG00000014080	yrdc	79	56.477	Eptatretus_burgeri
ENSDORG00000008788	Yrdc	87	93.367	ENSEASG00005012253	YRDC	70	93.367	Equus_asinus_asinus
ENSDORG00000008788	Yrdc	87	93.367	ENSECAG00000022522	YRDC	70	93.367	Equus_caballus
ENSDORG00000008788	Yrdc	84	65.608	ENSELUG00000018071	yrdc	61	65.608	Esox_lucius
ENSDORG00000008788	Yrdc	99	90.863	ENSFCAG00000011018	YRDC	70	90.863	Felis_catus
ENSDORG00000008788	Yrdc	85	73.298	ENSFALG00000000964	YRDC	92	71.287	Ficedula_albicollis
ENSDORG00000008788	Yrdc	87	61.929	ENSFHEG00000001029	yrdc	70	63.842	Fundulus_heteroclitus
ENSDORG00000008788	Yrdc	91	63.768	ENSGMOG00000015635	yrdc	97	63.768	Gadus_morhua
ENSDORG00000008788	Yrdc	97	67.873	ENSGALG00000029001	YRDC	85	67.873	Gallus_gallus
ENSDORG00000008788	Yrdc	76	31.053	ENSGALG00000025899	-	60	31.053	Gallus_gallus
ENSDORG00000008788	Yrdc	84	61.905	ENSGAFG00000008396	yrdc	69	61.905	Gambusia_affinis
ENSDORG00000008788	Yrdc	84	63.351	ENSGACG00000013878	yrdc	78	63.351	Gasterosteus_aculeatus
ENSDORG00000008788	Yrdc	87	69.543	ENSGAGG00000014968	YRDC	85	69.543	Gopherus_agassizii
ENSDORG00000008788	Yrdc	86	92.308	ENSGGOG00000007619	YRDC	70	92.308	Gorilla_gorilla
ENSDORG00000008788	Yrdc	84	66.138	ENSHBUG00000009298	yrdc	69	66.138	Haplochromis_burtoni
ENSDORG00000008788	Yrdc	99	91.371	ENSHGLG00000014075	YRDC	80	91.371	Heterocephalus_glaber_female
ENSDORG00000008788	Yrdc	100	72.563	ENSHGLG00100002734	YRDC	100	72.563	Heterocephalus_glaber_male
ENSDORG00000008788	Yrdc	84	62.434	ENSHCOG00000006598	yrdc	74	62.434	Hippocampus_comes
ENSDORG00000008788	Yrdc	84	65.789	ENSIPUG00000014985	yrdc	77	65.789	Ictalurus_punctatus
ENSDORG00000008788	Yrdc	99	72.760	ENSSTOG00000001643	YRDC	99	72.760	Ictidomys_tridecemlineatus
ENSDORG00000008788	Yrdc	86	64.103	ENSKMAG00000013468	yrdc	72	64.103	Kryptolebias_marmoratus
ENSDORG00000008788	Yrdc	84	66.138	ENSLBEG00000027501	yrdc	69	66.138	Labrus_bergylta
ENSDORG00000008788	Yrdc	86	67.857	ENSLACG00000010689	YRDC	90	67.857	Latimeria_chalumnae
ENSDORG00000008788	Yrdc	77	31.053	ENSLACG00000017624	si:ch211-153b23.3	55	31.053	Latimeria_chalumnae
ENSDORG00000008788	Yrdc	85	67.692	ENSLOCG00000003321	yrdc	80	67.692	Lepisosteus_oculatus
ENSDORG00000008788	Yrdc	99	82.819	ENSLAFG00000017556	YRDC	79	82.819	Loxodonta_africana
ENSDORG00000008788	Yrdc	86	91.282	ENSMFAG00000003487	YRDC	92	91.282	Macaca_fascicularis
ENSDORG00000008788	Yrdc	86	91.282	ENSMMUG00000005372	YRDC	52	91.282	Macaca_mulatta
ENSDORG00000008788	Yrdc	86	91.282	ENSMNEG00000029348	YRDC	70	91.282	Macaca_nemestrina
ENSDORG00000008788	Yrdc	66	91.275	ENSMLEG00000041122	YRDC	99	91.275	Mandrillus_leucophaeus
ENSDORG00000008788	Yrdc	84	64.550	ENSMAMG00000007315	yrdc	69	64.550	Mastacembelus_armatus
ENSDORG00000008788	Yrdc	84	65.608	ENSMZEG00005006948	yrdc	69	65.608	Maylandia_zebra
ENSDORG00000008788	Yrdc	85	71.728	ENSMGAG00000002833	YRDC	93	71.728	Meleagris_gallopavo
ENSDORG00000008788	Yrdc	99	72.302	ENSMICG00000031688	YRDC	71	93.367	Microcebus_murinus
ENSDORG00000008788	Yrdc	86	63.077	ENSMMOG00000002119	yrdc	72	63.077	Mola_mola
ENSDORG00000008788	Yrdc	87	82.741	ENSMODG00000017750	YRDC	70	82.741	Monodelphis_domestica
ENSDORG00000008788	Yrdc	84	65.789	ENSMALG00000012471	yrdc	72	65.789	Monopterus_albus
ENSDORG00000008788	Yrdc	87	83.249	MGP_CAROLIEiJ_G0026453	Yrdc	98	94.175	Mus_caroli
ENSDORG00000008788	Yrdc	87	90.863	ENSMUSG00000028889	Yrdc	100	93.333	Mus_musculus
ENSDORG00000008788	Yrdc	87	90.355	MGP_PahariEiJ_G0028784	Yrdc	100	92.381	Mus_pahari
ENSDORG00000008788	Yrdc	87	90.863	MGP_SPRETEiJ_G0027432	Yrdc	70	90.863	Mus_spretus
ENSDORG00000008788	Yrdc	97	82.648	ENSMPUG00000014542	YRDC	87	82.648	Mustela_putorius_furo
ENSDORG00000008788	Yrdc	84	85.263	ENSMLUG00000024310	-	93	85.263	Myotis_lucifugus
ENSDORG00000008788	Yrdc	97	60.073	ENSMLUG00000028796	-	97	60.073	Myotis_lucifugus
ENSDORG00000008788	Yrdc	98	70.652	ENSMLUG00000000955	-	99	70.652	Myotis_lucifugus
ENSDORG00000008788	Yrdc	100	73.214	ENSNGAG00000019099	Yrdc	100	73.214	Nannospalax_galili
ENSDORG00000008788	Yrdc	86	64.948	ENSNBRG00000009475	yrdc	72	64.948	Neolamprologus_brichardi
ENSDORG00000008788	Yrdc	87	92.347	ENSNLEG00000011665	YRDC	99	71.841	Nomascus_leucogenys
ENSDORG00000008788	Yrdc	87	85.787	ENSMEUG00000005068	YRDC	92	85.787	Notamacropus_eugenii
ENSDORG00000008788	Yrdc	100	69.643	ENSODEG00000007401	YRDC	100	90.476	Octodon_degus
ENSDORG00000008788	Yrdc	86	64.615	ENSONIG00000016213	yrdc	81	64.615	Oreochromis_niloticus
ENSDORG00000008788	Yrdc	87	91.878	ENSOCUG00000005384	YRDC	67	91.878	Oryctolagus_cuniculus
ENSDORG00000008788	Yrdc	84	61.905	ENSORLG00000014393	yrdc	70	61.905	Oryzias_latipes
ENSDORG00000008788	Yrdc	84	61.905	ENSORLG00020019663	yrdc	70	61.905	Oryzias_latipes_hni
ENSDORG00000008788	Yrdc	84	62.434	ENSORLG00015004625	yrdc	70	62.434	Oryzias_latipes_hsok
ENSDORG00000008788	Yrdc	84	61.905	ENSOMEG00000018550	yrdc	71	61.905	Oryzias_melastigma
ENSDORG00000008788	Yrdc	98	70.545	ENSOGAG00000030474	YRDC	100	70.545	Otolemur_garnettii
ENSDORG00000008788	Yrdc	87	90.816	ENSOARG00000019873	YRDC	70	90.816	Ovis_aries
ENSDORG00000008788	Yrdc	65	92.517	ENSPPAG00000039722	-	99	92.517	Pan_paniscus
ENSDORG00000008788	Yrdc	99	91.371	ENSPPRG00000007752	YRDC	70	91.371	Panthera_pardus
ENSDORG00000008788	Yrdc	69	87.342	ENSPTIG00000019821	YRDC	68	87.342	Panthera_tigris_altaica
ENSDORG00000008788	Yrdc	86	92.308	ENSPTRG00000000557	YRDC	70	92.308	Pan_troglodytes
ENSDORG00000008788	Yrdc	86	91.282	ENSPANG00000006487	YRDC	53	91.282	Papio_anubis
ENSDORG00000008788	Yrdc	84	66.316	ENSPKIG00000004574	yrdc	69	66.316	Paramormyrops_kingsleyae
ENSDORG00000008788	Yrdc	87	69.036	ENSPSIG00000006483	YRDC	69	69.036	Pelodiscus_sinensis
ENSDORG00000008788	Yrdc	84	65.608	ENSPMGG00000004184	yrdc	72	65.608	Periophthalmus_magnuspinnatus
ENSDORG00000008788	Yrdc	81	90.659	ENSPEMG00000016985	Yrdc	80	90.217	Peromyscus_maniculatus_bairdii
ENSDORG00000008788	Yrdc	81	55.435	ENSPMAG00000002905	yrdc	99	55.435	Petromyzon_marinus
ENSDORG00000008788	Yrdc	87	84.772	ENSPCIG00000025731	YRDC	71	84.772	Phascolarctos_cinereus
ENSDORG00000008788	Yrdc	84	64.021	ENSPFOG00000023097	yrdc	69	64.021	Poecilia_formosa
ENSDORG00000008788	Yrdc	84	63.492	ENSPLAG00000020882	yrdc	69	63.492	Poecilia_latipinna
ENSDORG00000008788	Yrdc	84	64.021	ENSPMEG00000013237	yrdc	70	64.021	Poecilia_mexicana
ENSDORG00000008788	Yrdc	84	62.963	ENSPREG00000005285	yrdc	69	62.963	Poecilia_reticulata
ENSDORG00000008788	Yrdc	86	92.308	ENSPPYG00000001523	-	80	92.308	Pongo_abelii
ENSDORG00000008788	Yrdc	86	87.629	ENSPCAG00000016850	YRDC	69	87.629	Procavia_capensis
ENSDORG00000008788	Yrdc	87	92.857	ENSPCOG00000013214	YRDC	70	92.857	Propithecus_coquereli
ENSDORG00000008788	Yrdc	97	92.228	ENSPVAG00000010147	YRDC	79	92.228	Pteropus_vampyrus
ENSDORG00000008788	Yrdc	84	66.138	ENSPNYG00000013956	yrdc	69	66.138	Pundamilia_nyererei
ENSDORG00000008788	Yrdc	77	65.318	ENSPNAG00000015625	yrdc	70	65.318	Pygocentrus_nattereri
ENSDORG00000008788	Yrdc	87	90.863	ENSRNOG00000025424	Yrdc	70	90.863	Rattus_norvegicus
ENSDORG00000008788	Yrdc	86	91.795	ENSRBIG00000032289	YRDC	70	91.795	Rhinopithecus_bieti
ENSDORG00000008788	Yrdc	86	91.795	ENSRROG00000039370	YRDC	66	91.795	Rhinopithecus_roxellana
ENSDORG00000008788	Yrdc	86	92.821	ENSSBOG00000018937	YRDC	83	92.821	Saimiri_boliviensis_boliviensis
ENSDORG00000008788	Yrdc	65	83.562	ENSSHAG00000013957	-	99	83.562	Sarcophilus_harrisii
ENSDORG00000008788	Yrdc	84	67.368	ENSSFOG00015006128	yrdc	81	67.368	Scleropages_formosus
ENSDORG00000008788	Yrdc	84	65.608	ENSSMAG00000005195	yrdc	70	65.608	Scophthalmus_maximus
ENSDORG00000008788	Yrdc	86	63.590	ENSSDUG00000009775	yrdc	72	63.590	Seriola_dumerili
ENSDORG00000008788	Yrdc	59	31.034	ENSSDUG00000006736	-	71	30.935	Seriola_dumerili
ENSDORG00000008788	Yrdc	86	63.590	ENSSLDG00000003196	yrdc	72	63.590	Seriola_lalandi_dorsalis
ENSDORG00000008788	Yrdc	96	65.138	ENSSPUG00000003946	YRDC	83	65.138	Sphenodon_punctatus
ENSDORG00000008788	Yrdc	86	62.371	ENSSPAG00000012559	yrdc	72	62.371	Stegastes_partitus
ENSDORG00000008788	Yrdc	87	88.832	ENSSSCG00000040425	YRDC	70	88.832	Sus_scrofa
ENSDORG00000008788	Yrdc	64	77.083	ENSTGUG00000001507	YRDC	98	77.083	Taeniopygia_guttata
ENSDORG00000008788	Yrdc	86	58.763	ENSTRUG00000005923	yrdc	70	62.887	Takifugu_rubripes
ENSDORG00000008788	Yrdc	69	89.809	ENSTBEG00000008863	YRDC	99	89.809	Tupaia_belangeri
ENSDORG00000008788	Yrdc	65	89.189	ENSTTRG00000013538	-	99	89.189	Tursiops_truncatus
ENSDORG00000008788	Yrdc	85	90.155	ENSUAMG00000006150	YRDC	95	90.155	Ursus_americanus
ENSDORG00000008788	Yrdc	84	71.579	ENSVPAG00000006642	YRDC	81	71.579	Vicugna_pacos
ENSDORG00000008788	Yrdc	67	86.842	ENSVVUG00000023132	-	50	86.842	Vulpes_vulpes
ENSDORG00000008788	Yrdc	97	62.100	ENSXETG00000014420	yrdc	91	62.100	Xenopus_tropicalis
ENSDORG00000008788	Yrdc	84	61.905	ENSXCOG00000000829	yrdc	78	61.905	Xiphophorus_couchianus
ENSDORG00000008788	Yrdc	84	60.847	ENSXMAG00000014606	yrdc	66	60.847	Xiphophorus_maculatus