EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000008872 (Gene tree)
Gene ID: 105985518
Gene Symbol: Nop16
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 12019 bases
Position: chrKN672375.1:2606696-2618714
Accession: 105985518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000019425	Nop16	PF09420.10	1.4e-22	1	2
ENSDORP00000019425	Nop16	PF09420.10	1.4e-22	2	2
ENSDORP00000008326	Nop16	PF09420.10	1.5e-22	1	2
ENSDORP00000008326	Nop16	PF09420.10	1.5e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008872	-	546	-	ENSDORP00000008326	182 (aa)	-	UPI000BAD0565
ENSDORT00000023801	-	886	XM_013016095	ENSDORP00000019425	178 (aa)	XP_012871549	A0A1S3F698

Gene Model

Click here to download ENSDORG00000008872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008872	Nop16	96	53.216	ENSAPOG00000010682	-	98	52.571	Acanthochromis_polyacanthus
ENSDORG00000008872	Nop16	100	91.573	ENSAMEG00000006988	-	100	91.573	Ailuropoda_melanoleuca
ENSDORG00000008872	Nop16	96	55.172	ENSACIG00000019263	nop16	97	55.172	Amphilophus_citrinellus
ENSDORG00000008872	Nop16	96	53.801	ENSAOCG00000005504	nop16	98	53.143	Amphiprion_ocellaris
ENSDORG00000008872	Nop16	96	53.801	ENSAPEG00000006605	nop16	98	53.143	Amphiprion_percula
ENSDORG00000008872	Nop16	96	55.882	ENSATEG00000014089	nop16	95	55.882	Anabas_testudineus
ENSDORG00000008872	Nop16	99	70.455	ENSACAG00000006333	-	99	70.455	Anolis_carolinensis
ENSDORG00000008872	Nop16	100	79.213	ENSANAG00000027410	-	100	79.213	Aotus_nancymaae
ENSDORG00000008872	Nop16	100	86.517	ENSANAG00000015743	-	100	86.517	Aotus_nancymaae
ENSDORG00000008872	Nop16	96	55.294	ENSACLG00000025227	nop16	97	55.233	Astatotilapia_calliptera
ENSDORG00000008872	Nop16	92	44.848	ENSAMXG00000006843	nop16	96	44.706	Astyanax_mexicanus
ENSDORG00000008872	Nop16	100	89.326	ENSBTAG00000010734	NOP16	100	89.326	Bos_taurus
ENSDORG00000008872	Nop16	100	90.449	ENSCAFG00000016694	NOP16	100	90.449	Canis_familiaris
ENSDORG00000008872	Nop16	99	90.341	ENSCAFG00020011505	-	94	90.341	Canis_lupus_dingo
ENSDORG00000008872	Nop16	100	89.326	ENSCHIG00000022082	-	100	89.326	Capra_hircus
ENSDORG00000008872	Nop16	99	88.701	ENSTSYG00000030409	-	99	88.701	Carlito_syrichta
ENSDORG00000008872	Nop16	100	72.472	ENSTSYG00000032690	-	100	72.472	Carlito_syrichta
ENSDORG00000008872	Nop16	100	88.202	ENSCPOG00000026072	-	100	88.202	Cavia_porcellus
ENSDORG00000008872	Nop16	97	79.661	ENSCCAG00000026775	-	94	85.714	Cebus_capucinus
ENSDORG00000008872	Nop16	100	87.079	ENSCLAG00000015405	-	100	87.079	Chinchilla_lanigera
ENSDORG00000008872	Nop16	100	88.764	ENSCSAG00000009400	-	100	88.764	Chlorocebus_sabaeus
ENSDORG00000008872	Nop16	99	75.281	ENSCPBG00000022647	-	99	75.281	Chrysemys_picta_bellii
ENSDORG00000008872	Nop16	99	42.778	ENSCING00000006179	-	97	42.778	Ciona_intestinalis
ENSDORG00000008872	Nop16	88	43.038	ENSCSAVG00000000269	-	87	43.038	Ciona_savignyi
ENSDORG00000008872	Nop16	100	88.202	ENSCGRG00001004259	Nop16	100	88.202	Cricetulus_griseus_chok1gshd
ENSDORG00000008872	Nop16	100	88.202	ENSCGRG00000010975	Nop16	100	88.202	Cricetulus_griseus_crigri
ENSDORG00000008872	Nop16	96	50.000	ENSCSEG00000020523	nop16	99	49.711	Cynoglossus_semilaevis
ENSDORG00000008872	Nop16	96	54.118	ENSCVAG00000020140	nop16	97	54.070	Cyprinodon_variegatus
ENSDORG00000008872	Nop16	97	50.000	ENSDARG00000044402	nop16	98	50.286	Danio_rerio
ENSDORG00000008872	Nop16	100	89.326	ENSDNOG00000042890	-	100	89.326	Dasypus_novemcinctus
ENSDORG00000008872	Nop16	97	42.623	ENSEBUG00000011196	nop16	98	42.623	Eptatretus_burgeri
ENSDORG00000008872	Nop16	100	90.449	ENSEASG00005011988	-	100	90.449	Equus_asinus_asinus
ENSDORG00000008872	Nop16	100	91.573	ENSECAG00000021354	NOP16	100	91.573	Equus_caballus
ENSDORG00000008872	Nop16	96	54.651	ENSELUG00000000401	nop16	97	54.335	Esox_lucius
ENSDORG00000008872	Nop16	100	90.449	ENSFCAG00000025473	-	100	90.449	Felis_catus
ENSDORG00000008872	Nop16	100	66.111	ENSFALG00000008553	-	100	66.111	Ficedula_albicollis
ENSDORG00000008872	Nop16	100	87.640	ENSFDAG00000000193	-	100	87.640	Fukomys_damarensis
ENSDORG00000008872	Nop16	96	54.118	ENSFHEG00000016452	nop16	97	54.070	Fundulus_heteroclitus
ENSDORG00000008872	Nop16	100	73.333	ENSGALG00000003355	-	100	73.333	Gallus_gallus
ENSDORG00000008872	Nop16	83	55.102	ENSGAFG00000011616	nop16	81	55.034	Gambusia_affinis
ENSDORG00000008872	Nop16	96	52.941	ENSGACG00000002618	-	99	52.907	Gasterosteus_aculeatus
ENSDORG00000008872	Nop16	96	51.744	ENSGACG00000003122	-	99	54.545	Gasterosteus_aculeatus
ENSDORG00000008872	Nop16	96	48.235	ENSGACG00000020810	nop16	100	48.235	Gasterosteus_aculeatus
ENSDORG00000008872	Nop16	96	53.529	ENSGACG00000020819	-	99	53.488	Gasterosteus_aculeatus
ENSDORG00000008872	Nop16	96	54.706	ENSHBUG00000013527	nop16	97	54.651	Haplochromis_burtoni
ENSDORG00000008872	Nop16	100	88.764	ENSHGLG00000013437	NOP16	100	88.764	Heterocephalus_glaber_female
ENSDORG00000008872	Nop16	100	88.764	ENSHGLG00100011375	NOP16	100	88.764	Heterocephalus_glaber_male
ENSDORG00000008872	Nop16	97	52.247	ENSHCOG00000019999	nop16	99	52.247	Hippocampus_comes
ENSDORG00000008872	Nop16	96	48.824	ENSIPUG00000006682	nop16	96	49.112	Ictalurus_punctatus
ENSDORG00000008872	Nop16	100	88.333	ENSSTOG00000004869	-	100	88.333	Ictidomys_tridecemlineatus
ENSDORG00000008872	Nop16	100	89.326	ENSJJAG00000017655	Nop16	100	89.326	Jaculus_jaculus
ENSDORG00000008872	Nop16	96	56.471	ENSKMAG00000006164	nop16	97	56.395	Kryptolebias_marmoratus
ENSDORG00000008872	Nop16	96	54.118	ENSLBEG00000018355	nop16	79	54.070	Labrus_bergylta
ENSDORG00000008872	Nop16	99	64.407	ENSLACG00000014884	nop16	100	64.407	Latimeria_chalumnae
ENSDORG00000008872	Nop16	99	57.062	ENSLOCG00000012348	nop16	98	57.062	Lepisosteus_oculatus
ENSDORG00000008872	Nop16	100	89.326	ENSLAFG00000017886	-	100	89.326	Loxodonta_africana
ENSDORG00000008872	Nop16	96	57.059	ENSMAMG00000021868	nop16	97	56.395	Mastacembelus_armatus
ENSDORG00000008872	Nop16	96	55.294	ENSMZEG00005012112	nop16	97	55.233	Maylandia_zebra
ENSDORG00000008872	Nop16	57	69.608	ENSMGAG00000004726	-	100	69.608	Meleagris_gallopavo
ENSDORG00000008872	Nop16	60	83.019	ENSMAUG00000009852	-	100	83.019	Mesocricetus_auratus
ENSDORG00000008872	Nop16	94	79.167	ENSMAUG00000015569	-	99	79.167	Mesocricetus_auratus
ENSDORG00000008872	Nop16	100	89.326	ENSMOCG00000020788	Nop16	100	89.326	Microtus_ochrogaster
ENSDORG00000008872	Nop16	96	54.706	ENSMMOG00000016054	nop16	99	54.706	Mola_mola
ENSDORG00000008872	Nop16	100	80.110	ENSMODG00000005214	-	100	80.110	Monodelphis_domestica
ENSDORG00000008872	Nop16	96	52.353	ENSMALG00000021263	nop16	97	52.326	Monopterus_albus
ENSDORG00000008872	Nop16	100	89.888	MGP_CAROLIEiJ_G0018538	Nop16	100	89.888	Mus_caroli
ENSDORG00000008872	Nop16	100	90.449	ENSMUSG00000025869	Nop16	100	90.449	Mus_musculus
ENSDORG00000008872	Nop16	100	89.888	MGP_PahariEiJ_G0019603	Nop16	100	89.888	Mus_pahari
ENSDORG00000008872	Nop16	100	89.888	MGP_SPRETEiJ_G0019418	Nop16	100	89.888	Mus_spretus
ENSDORG00000008872	Nop16	100	88.202	ENSMPUG00000016964	-	100	88.202	Mustela_putorius_furo
ENSDORG00000008872	Nop16	100	91.011	ENSMPUG00000012552	-	100	91.011	Mustela_putorius_furo
ENSDORG00000008872	Nop16	99	89.266	ENSMLUG00000003504	-	99	89.266	Myotis_lucifugus
ENSDORG00000008872	Nop16	100	88.764	ENSNGAG00000018045	Nop16	100	88.764	Nannospalax_galili
ENSDORG00000008872	Nop16	96	54.118	ENSNBRG00000015181	nop16	96	54.118	Neolamprologus_brichardi
ENSDORG00000008872	Nop16	100	88.202	ENSODEG00000009586	-	100	88.202	Octodon_degus
ENSDORG00000008872	Nop16	96	57.059	ENSONIG00000016417	nop16	97	56.977	Oreochromis_niloticus
ENSDORG00000008872	Nop16	100	88.764	ENSOCUG00000013171	-	100	88.764	Oryctolagus_cuniculus
ENSDORG00000008872	Nop16	96	56.471	ENSORLG00000026611	nop16	96	56.395	Oryzias_latipes
ENSDORG00000008872	Nop16	96	57.059	ENSOMEG00000023001	nop16	96	56.977	Oryzias_melastigma
ENSDORG00000008872	Nop16	100	90.449	ENSOGAG00000000824	-	100	90.449	Otolemur_garnettii
ENSDORG00000008872	Nop16	100	89.326	ENSOARG00000002165	-	100	89.326	Ovis_aries
ENSDORG00000008872	Nop16	100	89.326	ENSPPAG00000035473	-	100	89.326	Pan_paniscus
ENSDORG00000008872	Nop16	100	90.449	ENSPPRG00000016600	-	100	90.449	Panthera_pardus
ENSDORG00000008872	Nop16	100	89.888	ENSPTIG00000011708	-	100	89.888	Panthera_tigris_altaica
ENSDORG00000008872	Nop16	100	89.326	ENSPTRG00000017560	NOP16	100	89.326	Pan_troglodytes
ENSDORG00000008872	Nop16	99	55.367	ENSPKIG00000009587	nop16	99	55.367	Paramormyrops_kingsleyae
ENSDORG00000008872	Nop16	79	67.606	ENSPSIG00000013546	-	99	67.606	Pelodiscus_sinensis
ENSDORG00000008872	Nop16	93	55.952	ENSPMGG00000003443	nop16	98	55.952	Periophthalmus_magnuspinnatus
ENSDORG00000008872	Nop16	100	88.764	ENSPEMG00000020268	Nop16	100	88.764	Peromyscus_maniculatus_bairdii
ENSDORG00000008872	Nop16	100	82.222	ENSPCIG00000009782	-	100	82.222	Phascolarctos_cinereus
ENSDORG00000008872	Nop16	96	53.529	ENSPFOG00000010549	nop16	97	53.488	Poecilia_formosa
ENSDORG00000008872	Nop16	77	53.285	ENSPLAG00000007124	nop16	71	53.237	Poecilia_latipinna
ENSDORG00000008872	Nop16	96	53.529	ENSPMEG00000008611	nop16	97	53.488	Poecilia_mexicana
ENSDORG00000008872	Nop16	96	54.023	ENSPREG00000012940	nop16	97	54.023	Poecilia_reticulata
ENSDORG00000008872	Nop16	99	88.701	ENSPPYG00000016070	-	99	88.701	Pongo_abelii
ENSDORG00000008872	Nop16	96	55.294	ENSPNYG00000013529	nop16	97	55.233	Pundamilia_nyererei
ENSDORG00000008872	Nop16	92	48.193	ENSPNAG00000016233	nop16	94	48.503	Pygocentrus_nattereri
ENSDORG00000008872	Nop16	100	89.888	ENSRNOG00000017284	Nop16	100	89.888	Rattus_norvegicus
ENSDORG00000008872	Nop16	100	81.564	ENSSHAG00000001724	-	100	81.564	Sarcophilus_harrisii
ENSDORG00000008872	Nop16	90	53.125	ENSSFOG00015010537	nop16	78	52.601	Scleropages_formosus
ENSDORG00000008872	Nop16	96	54.706	ENSSDUG00000022349	nop16	97	54.598	Seriola_dumerili
ENSDORG00000008872	Nop16	96	55.294	ENSSLDG00000025171	nop16	97	55.172	Seriola_lalandi_dorsalis
ENSDORG00000008872	Nop16	73	79.231	ENSSARG00000006699	-	61	79.231	Sorex_araneus
ENSDORG00000008872	Nop16	99	72.727	ENSSPUG00000006508	-	98	72.727	Sphenodon_punctatus
ENSDORG00000008872	Nop16	96	54.118	ENSSPAG00000011772	nop16	97	54.335	Stegastes_partitus
ENSDORG00000008872	Nop16	100	87.640	ENSSSCG00000029577	-	100	87.640	Sus_scrofa
ENSDORG00000008872	Nop16	100	71.111	ENSTGUG00000000543	-	100	71.111	Taeniopygia_guttata
ENSDORG00000008872	Nop16	99	53.933	ENSTRUG00000020255	nop16	100	53.933	Takifugu_rubripes
ENSDORG00000008872	Nop16	96	56.471	ENSTNIG00000007616	nop16	95	56.471	Tetraodon_nigroviridis
ENSDORG00000008872	Nop16	100	91.011	ENSUAMG00000005139	-	100	91.011	Ursus_americanus
ENSDORG00000008872	Nop16	99	90.909	ENSVVUG00000001697	-	94	90.909	Vulpes_vulpes
ENSDORG00000008872	Nop16	92	57.669	ENSXETG00000022342	nop16	95	57.669	Xenopus_tropicalis
ENSDORG00000008872	Nop16	96	54.118	ENSXCOG00000018829	nop16	98	53.488	Xiphophorus_couchianus
ENSDORG00000008872	Nop16	96	54.118	ENSXMAG00000029113	nop16	97	54.070	Xiphophorus_maculatus