EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000008896 (Gene tree)
Gene ID: 105991229
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 10769 bases
Position: chrKN672416.1:4059188-4069956
Accession: 105991229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008349	RRM_1	PF00076.22	5.1e-18	1	1
ENSDORP00000020305	RRM_1	PF00076.22	5.1e-18	1	1
ENSDORP00000008349	RRM_3	PF08777.11	3.1e-30	1	1
ENSDORP00000020305	RRM_3	PF08777.11	2.4e-29	1	1
ENSDORP00000008349	La	PF05383.17	9.1e-22	1	1
ENSDORP00000020305	La	PF05383.17	9.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008896	-	1731	-	ENSDORP00000008349	576 (aa)	-	UPI000BACFA2E
ENSDORT00000034573	-	1734	XM_013023833	ENSDORP00000020305	577 (aa)	XP_012879287	UPI000BAD0407

Gene Model

Click here to download ENSDORG00000008896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008896	-	96	87.207	ENSG00000174720	LARP7	95	87.207	Homo_sapiens
ENSDORG00000008896	-	98	55.806	ENSAPOG00000014570	larp7	95	56.429	Acanthochromis_polyacanthus
ENSDORG00000008896	-	99	84.483	ENSAMEG00000015642	LARP7	95	85.560	Ailuropoda_melanoleuca
ENSDORG00000008896	-	97	54.626	ENSACIG00000023850	larp7	95	53.333	Amphilophus_citrinellus
ENSDORG00000008896	-	95	55.142	ENSAOCG00000016160	larp7	95	55.415	Amphiprion_ocellaris
ENSDORG00000008896	-	95	55.496	ENSAPEG00000021823	larp7	95	55.415	Amphiprion_percula
ENSDORG00000008896	-	98	56.899	ENSATEG00000016238	larp7	95	56.597	Anabas_testudineus
ENSDORG00000008896	-	98	72.373	ENSAPLG00000012887	LARP7	95	71.528	Anas_platyrhynchos
ENSDORG00000008896	-	98	69.828	ENSACAG00000010662	LARP7	91	69.929	Anolis_carolinensis
ENSDORG00000008896	-	96	69.314	ENSANAG00000022318	-	95	69.314	Aotus_nancymaae
ENSDORG00000008896	-	96	84.892	ENSANAG00000031139	-	95	84.892	Aotus_nancymaae
ENSDORG00000008896	-	97	53.535	ENSACLG00000023184	larp7	95	53.726	Astatotilapia_calliptera
ENSDORG00000008896	-	96	83.964	ENSBTAG00000009632	LARP7	93	83.964	Bos_taurus
ENSDORG00000008896	-	96	86.823	ENSCJAG00000003711	LARP7	95	86.823	Callithrix_jacchus
ENSDORG00000008896	-	96	84.229	ENSCAFG00000011715	LARP7	96	84.229	Canis_familiaris
ENSDORG00000008896	-	96	85.018	ENSCAFG00020017225	LARP7	96	85.018	Canis_lupus_dingo
ENSDORG00000008896	-	98	69.190	ENSCHIG00000013971	-	90	89.623	Capra_hircus
ENSDORG00000008896	-	96	83.784	ENSCHIG00000014163	-	96	83.784	Capra_hircus
ENSDORG00000008896	-	95	77.117	ENSTSYG00000035188	-	98	77.596	Carlito_syrichta
ENSDORG00000008896	-	89	86.923	ENSTSYG00000006769	-	95	86.873	Carlito_syrichta
ENSDORG00000008896	-	96	74.007	ENSCAPG00000009328	LARP7	96	73.945	Cavia_aperea
ENSDORG00000008896	-	96	82.759	ENSCPOG00000011830	LARP7	96	82.332	Cavia_porcellus
ENSDORG00000008896	-	95	77.617	ENSCCAG00000023563	-	100	78.108	Cebus_capucinus
ENSDORG00000008896	-	96	86.691	ENSCCAG00000026787	-	95	86.691	Cebus_capucinus
ENSDORG00000008896	-	96	86.643	ENSCATG00000043535	LARP7	95	86.643	Cercocebus_atys
ENSDORG00000008896	-	99	84.402	ENSCLAG00000005894	LARP7	96	86.837	Chinchilla_lanigera
ENSDORG00000008896	-	96	86.643	ENSCSAG00000003810	LARP7	95	86.643	Chlorocebus_sabaeus
ENSDORG00000008896	-	99	83.074	ENSCHOG00000002379	-	96	84.448	Choloepus_hoffmanni
ENSDORG00000008896	-	93	74.677	ENSCHOG00000008967	-	100	74.677	Choloepus_hoffmanni
ENSDORG00000008896	-	99	71.044	ENSCPBG00000004919	LARP7	97	72.154	Chrysemys_picta_bellii
ENSDORG00000008896	-	68	36.970	ENSCING00000021685	-	75	37.037	Ciona_intestinalis
ENSDORG00000008896	-	96	86.667	ENSCANG00000031482	LARP7	94	86.667	Colobus_angolensis_palliatus
ENSDORG00000008896	-	86	73.000	ENSCGRG00001012747	-	95	74.233	Cricetulus_griseus_chok1gshd
ENSDORG00000008896	-	95	84.296	ENSCGRG00001025050	-	96	85.584	Cricetulus_griseus_chok1gshd
ENSDORG00000008896	-	91	74.765	ENSCGRG00000007642	-	95	75.962	Cricetulus_griseus_crigri
ENSDORG00000008896	-	91	76.894	ENSCGRG00000001141	-	96	76.996	Cricetulus_griseus_crigri
ENSDORG00000008896	-	98	54.811	ENSCSEG00000009088	larp7	95	55.172	Cynoglossus_semilaevis
ENSDORG00000008896	-	97	54.902	ENSCVAG00000016852	larp7	80	74.317	Cyprinodon_variegatus
ENSDORG00000008896	-	97	54.850	ENSDARG00000017315	larp7	94	52.594	Danio_rerio
ENSDORG00000008896	-	98	84.238	ENSDNOG00000013761	LARP7	96	84.767	Dasypus_novemcinctus
ENSDORG00000008896	-	98	80.212	ENSETEG00000011692	LARP7	95	79.928	Echinops_telfairi
ENSDORG00000008896	-	99	83.821	ENSEASG00005005592	LARP7	95	84.865	Equus_asinus_asinus
ENSDORG00000008896	-	99	84.165	ENSECAG00000000834	LARP7	95	85.225	Equus_caballus
ENSDORG00000008896	-	91	82.420	ENSEEUG00000012824	LARP7	95	82.983	Erinaceus_europaeus
ENSDORG00000008896	-	95	55.908	ENSELUG00000015341	larp7	88	75.956	Esox_lucius
ENSDORG00000008896	-	96	84.685	ENSFCAG00000031966	LARP7	95	84.838	Felis_catus
ENSDORG00000008896	-	98	72.117	ENSFALG00000000972	LARP7	93	70.745	Ficedula_albicollis
ENSDORG00000008896	-	96	78.919	ENSFDAG00000011855	-	96	79.820	Fukomys_damarensis
ENSDORG00000008896	-	96	85.018	ENSFDAG00000014048	-	96	85.740	Fukomys_damarensis
ENSDORG00000008896	-	99	54.017	ENSFHEG00000021652	larp7	95	55.315	Fundulus_heteroclitus
ENSDORG00000008896	-	98	50.000	ENSGMOG00000010536	larp7	95	51.730	Gadus_morhua
ENSDORG00000008896	-	99	70.084	ENSGALG00000012048	LARP7	95	70.526	Gallus_gallus
ENSDORG00000008896	-	99	54.422	ENSGAFG00000015400	larp7	95	55.091	Gambusia_affinis
ENSDORG00000008896	-	97	52.743	ENSGACG00000019618	larp7	80	71.585	Gasterosteus_aculeatus
ENSDORG00000008896	-	98	71.210	ENSGAGG00000024520	LARP7	95	71.728	Gopherus_agassizii
ENSDORG00000008896	-	87	83.762	ENSGGOG00000006438	-	97	83.762	Gorilla_gorilla
ENSDORG00000008896	-	96	87.027	ENSGGOG00000023567	-	95	87.027	Gorilla_gorilla
ENSDORG00000008896	-	97	53.704	ENSHBUG00000019223	larp7	95	54.073	Haplochromis_burtoni
ENSDORG00000008896	-	96	86.486	ENSHGLG00000002716	LARP7	96	86.486	Heterocephalus_glaber_female
ENSDORG00000008896	-	96	86.486	ENSHGLG00100000332	LARP7	96	86.486	Heterocephalus_glaber_male
ENSDORG00000008896	-	97	54.417	ENSHCOG00000000664	LARP7	96	54.696	Hippocampus_comes
ENSDORG00000008896	-	98	54.514	ENSIPUG00000019886	larp7	95	54.821	Ictalurus_punctatus
ENSDORG00000008896	-	99	87.024	ENSSTOG00000011789	LARP7	96	88.267	Ictidomys_tridecemlineatus
ENSDORG00000008896	-	99	84.111	ENSJJAG00000000257	-	96	85.252	Jaculus_jaculus
ENSDORG00000008896	-	97	52.890	ENSKMAG00000005057	larp7	95	52.763	Kryptolebias_marmoratus
ENSDORG00000008896	-	98	52.586	ENSLBEG00000020062	larp7	95	53.274	Labrus_bergylta
ENSDORG00000008896	-	98	61.214	ENSLACG00000013744	LARP7	95	62.069	Latimeria_chalumnae
ENSDORG00000008896	-	99	50.987	ENSLOCG00000011608	larp7	95	49.829	Lepisosteus_oculatus
ENSDORG00000008896	-	99	85.567	ENSLAFG00000015769	LARP7	95	87.296	Loxodonta_africana
ENSDORG00000008896	-	96	86.643	ENSMFAG00000036506	LARP7	95	86.643	Macaca_fascicularis
ENSDORG00000008896	-	96	86.643	ENSMMUG00000017911	LARP7	95	86.643	Macaca_mulatta
ENSDORG00000008896	-	96	86.823	ENSMNEG00000034758	LARP7	100	85.458	Macaca_nemestrina
ENSDORG00000008896	-	96	86.823	ENSMLEG00000026154	LARP7	95	86.823	Mandrillus_leucophaeus
ENSDORG00000008896	-	97	53.535	ENSMZEG00005002084	larp7	95	53.726	Maylandia_zebra
ENSDORG00000008896	-	99	70.578	ENSMGAG00000010947	LARP7	95	71.813	Meleagris_gallopavo
ENSDORG00000008896	-	95	68.773	ENSMAUG00000005625	-	96	70.255	Mesocricetus_auratus
ENSDORG00000008896	-	96	87.207	ENSMICG00000031035	LARP7	95	87.207	Microcebus_murinus
ENSDORG00000008896	-	89	79.183	ENSMOCG00000015761	-	100	80.118	Microtus_ochrogaster
ENSDORG00000008896	-	95	83.636	ENSMOCG00000012519	-	96	83.725	Microtus_ochrogaster
ENSDORG00000008896	-	99	75.421	ENSMODG00000005669	LARP7	95	76.418	Monodelphis_domestica
ENSDORG00000008896	-	95	82.491	MGP_CAROLIEiJ_G0025613	-	96	83.636	Mus_caroli
ENSDORG00000008896	-	95	82.671	ENSMUSG00000027968	Larp7	96	84.000	Mus_musculus
ENSDORG00000008896	-	95	83.002	MGP_PahariEiJ_G0027060	-	96	84.335	Mus_pahari
ENSDORG00000008896	-	95	83.423	MGP_SPRETEiJ_G0026566	Larp7	96	84.755	Mus_spretus
ENSDORG00000008896	-	95	80.403	ENSMPUG00000018052	-	100	81.937	Mustela_putorius_furo
ENSDORG00000008896	-	96	83.935	ENSMPUG00000008331	-	96	83.935	Mustela_putorius_furo
ENSDORG00000008896	-	86	77.092	ENSMLUG00000027214	LARP7	100	77.092	Myotis_lucifugus
ENSDORG00000008896	-	98	81.552	ENSNGAG00000007368	-	96	83.303	Nannospalax_galili
ENSDORG00000008896	-	96	86.643	ENSNLEG00000016354	LARP7	94	86.643	Nomascus_leucogenys
ENSDORG00000008896	-	87	74.563	ENSMEUG00000004739	LARP7	100	74.805	Notamacropus_eugenii
ENSDORG00000008896	-	84	86.466	ENSOPRG00000009594	-	83	86.466	Ochotona_princeps
ENSDORG00000008896	-	91	83.585	ENSODEG00000011121	LARP7	94	82.890	Octodon_degus
ENSDORG00000008896	-	95	54.433	ENSONIG00000008763	larp7	95	54.643	Oreochromis_niloticus
ENSDORG00000008896	-	99	75.000	ENSOANG00000009298	LARP7	95	76.148	Ornithorhynchus_anatinus
ENSDORG00000008896	-	98	83.656	ENSOCUG00000007073	LARP7	96	83.633	Oryctolagus_cuniculus
ENSDORG00000008896	-	95	54.317	ENSORLG00000004978	larp7	94	55.046	Oryzias_latipes
ENSDORG00000008896	-	95	54.676	ENSORLG00020013825	larp7	94	55.229	Oryzias_latipes_hni
ENSDORG00000008896	-	97	55.398	ENSOMEG00000006920	larp7	95	55.699	Oryzias_melastigma
ENSDORG00000008896	-	96	86.355	ENSOGAG00000001643	LARP7	95	86.355	Otolemur_garnettii
ENSDORG00000008896	-	96	83.692	ENSOARG00000001809	LARP7	96	83.871	Ovis_aries
ENSDORG00000008896	-	96	86.847	ENSPPAG00000038420	LARP7	94	86.126	Pan_paniscus
ENSDORG00000008896	-	96	84.685	ENSPPRG00000023256	LARP7	95	84.685	Panthera_pardus
ENSDORG00000008896	-	92	83.647	ENSPTIG00000021146	LARP7	92	83.804	Panthera_tigris_altaica
ENSDORG00000008896	-	96	87.027	ENSPTRG00000016380	LARP7	95	87.027	Pan_troglodytes
ENSDORG00000008896	-	96	86.847	ENSPANG00000006701	LARP7	94	86.847	Papio_anubis
ENSDORG00000008896	-	99	58.904	ENSPKIG00000023484	larp7	94	58.541	Paramormyrops_kingsleyae
ENSDORG00000008896	-	97	70.415	ENSPSIG00000014419	LARP7	94	70.796	Pelodiscus_sinensis
ENSDORG00000008896	-	95	82.321	ENSPEMG00000013978	-	96	82.593	Peromyscus_maniculatus_bairdii
ENSDORG00000008896	-	96	37.153	ENSPMAG00000005362	larp7	93	37.189	Petromyzon_marinus
ENSDORG00000008896	-	99	74.667	ENSPCIG00000020284	LARP7	98	84.615	Phascolarctos_cinereus
ENSDORG00000008896	-	99	55.214	ENSPFOG00000000265	larp7	95	54.827	Poecilia_formosa
ENSDORG00000008896	-	99	55.214	ENSPLAG00000012181	larp7	95	54.827	Poecilia_latipinna
ENSDORG00000008896	-	99	55.214	ENSPMEG00000007182	larp7	95	54.827	Poecilia_mexicana
ENSDORG00000008896	-	97	54.530	ENSPREG00000019513	larp7	95	53.832	Poecilia_reticulata
ENSDORG00000008896	-	96	86.667	ENSPPYG00000015010	LARP7	95	86.667	Pongo_abelii
ENSDORG00000008896	-	58	96.154	ENSPCAG00000003373	-	68	96.154	Procavia_capensis
ENSDORG00000008896	-	76	92.000	ENSPCOG00000023946	LARP7	85	92.000	Propithecus_coquereli
ENSDORG00000008896	-	99	81.026	ENSPVAG00000000282	LARP7	99	80.617	Pteropus_vampyrus
ENSDORG00000008896	-	99	53.002	ENSPNAG00000017554	larp7	95	53.748	Pygocentrus_nattereri
ENSDORG00000008896	-	95	82.246	ENSRNOG00000048989	Larp7	96	83.212	Rattus_norvegicus
ENSDORG00000008896	-	81	96.296	ENSRBIG00000031916	LARP7	93	96.296	Rhinopithecus_bieti
ENSDORG00000008896	-	96	87.004	ENSRROG00000033414	LARP7	95	87.004	Rhinopithecus_roxellana
ENSDORG00000008896	-	95	65.405	ENSSBOG00000022652	-	95	65.225	Saimiri_boliviensis_boliviensis
ENSDORG00000008896	-	96	87.050	ENSSBOG00000030886	-	95	87.050	Saimiri_boliviensis_boliviensis
ENSDORG00000008896	-	96	74.517	ENSSHAG00000008153	LARP7	95	75.044	Sarcophilus_harrisii
ENSDORG00000008896	-	98	56.947	ENSSFOG00015019344	larp7	95	56.684	Scleropages_formosus
ENSDORG00000008896	-	95	54.867	ENSSMAG00000011296	larp7	95	54.182	Scophthalmus_maximus
ENSDORG00000008896	-	98	56.250	ENSSDUG00000007045	larp7	95	55.273	Seriola_dumerili
ENSDORG00000008896	-	51	74.419	ENSSARG00000000190	-	98	74.834	Sorex_araneus
ENSDORG00000008896	-	98	55.440	ENSSPAG00000016066	larp7	95	55.496	Stegastes_partitus
ENSDORG00000008896	-	96	84.173	ENSSSCG00000009119	LARP7	95	84.173	Sus_scrofa
ENSDORG00000008896	-	98	71.254	ENSTGUG00000001804	LARP7	95	71.326	Taeniopygia_guttata
ENSDORG00000008896	-	98	50.780	ENSTRUG00000004996	larp7	96	53.039	Takifugu_rubripes
ENSDORG00000008896	-	99	49.570	ENSTNIG00000007183	larp7	95	48.658	Tetraodon_nigroviridis
ENSDORG00000008896	-	96	80.144	ENSTBEG00000009188	LARP7	95	80.144	Tupaia_belangeri
ENSDORG00000008896	-	90	83.397	ENSTTRG00000005233	LARP7	100	84.160	Tursiops_truncatus
ENSDORG00000008896	-	96	85.045	ENSUAMG00000000836	LARP7	95	85.045	Ursus_americanus
ENSDORG00000008896	-	94	84.461	ENSUMAG00000002263	LARP7	94	84.461	Ursus_maritimus
ENSDORG00000008896	-	96	86.151	ENSVPAG00000010502	LARP7	95	86.151	Vicugna_pacos
ENSDORG00000008896	-	96	85.379	ENSVVUG00000002274	LARP7	96	85.379	Vulpes_vulpes
ENSDORG00000008896	-	98	62.500	ENSXETG00000024097	larp7	95	61.754	Xenopus_tropicalis
ENSDORG00000008896	-	97	55.080	ENSXCOG00000004883	larp7	84	73.224	Xiphophorus_couchianus
ENSDORG00000008896	-	99	53.675	ENSXMAG00000008479	larp7	95	54.973	Xiphophorus_maculatus