EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000008920 (Gene tree)
Gene ID: 105993777
Gene Symbol: Rab12
Alias: 2900054P15Rik
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 24525 bases
Position: chrKN672446.1:5328413-5352937
Accession: 105993777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008373	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000008920	-	1828	XM_013027138	ENSDORP00000008373	227 (aa)	XP_012882592	UPI000BAD0489

Gene Model

Click here to download ENSDORG00000008920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000008920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000008920	Rab12	92	36.792	ENSDORG00000023851	Rab14	80	40.462
ENSDORG00000008920	Rab12	82	36.316	ENSDORG00000027671	-	88	36.612
ENSDORG00000008920	Rab12	70	39.623	ENSDORG00000026441	Rab6b	76	39.623
ENSDORG00000008920	Rab12	86	35.323	ENSDORG00000023618	Rab33b	78	38.122
ENSDORG00000008920	Rab12	52	30.894	ENSDORG00000013488	Arfrp1	60	30.894
ENSDORG00000008920	Rab12	68	31.847	ENSDORG00000025032	Mras	80	32.143
ENSDORG00000008920	Rab12	72	46.667	ENSDORG00000029360	-	78	46.667
ENSDORG00000008920	Rab12	73	34.524	ENSDORG00000028344	Rab23	69	34.524
ENSDORG00000008920	Rab12	87	40.102	ENSDORG00000012048	Rab2b	80	47.097
ENSDORG00000008920	Rab12	66	30.464	ENSDORG00000025267	Nras	85	30.488
ENSDORG00000008920	Rab12	81	35.326	ENSDORG00000025063	Rab5b	85	35.326
ENSDORG00000008920	Rab12	70	40.252	ENSDORG00000027784	Rab6a	76	40.252
ENSDORG00000008920	Rab12	70	37.349	ENSDORG00000011452	Rab34	63	37.349
ENSDORG00000008920	Rab12	76	52.326	ENSDORG00000001591	Rab13	84	52.326
ENSDORG00000008920	Rab12	79	47.778	ENSDORG00000015066	-	89	47.253
ENSDORG00000008920	Rab12	74	43.452	ENSDORG00000025014	Rab2a	85	41.758
ENSDORG00000008920	Rab12	75	45.614	ENSDORG00000000972	Rab35	84	45.614
ENSDORG00000008920	Rab12	90	36.585	ENSDORG00000002922	Rab25	79	40.588
ENSDORG00000008920	Rab12	79	47.778	ENSDORG00000010504	-	89	47.253
ENSDORG00000008920	Rab12	68	30.818	ENSDORG00000011469	-	89	30.814
ENSDORG00000008920	Rab12	90	37.736	ENSDORG00000006304	Rab11b	76	41.916
ENSDORG00000008920	Rab12	76	48.555	ENSDORG00000002511	Rab1b	84	49.112
ENSDORG00000008920	Rab12	95	31.416	ENSDORG00000000003	Rabl2	69	35.220
ENSDORG00000008920	Rab12	72	34.132	ENSDORG00000009342	Rab9	83	34.132
ENSDORG00000008920	Rab12	72	49.697	ENSDORG00000028596	-	81	49.112
ENSDORG00000008920	Rab12	83	46.032	ENSDORG00000028628	-	82	49.704
ENSDORG00000008920	Rab12	79	35.676	ENSDORG00000023607	Rab42	81	36.158
ENSDORG00000008920	Rab12	79	37.989	ENSDORG00000024958	-	81	37.989
ENSDORG00000008920	Rab12	96	36.000	ENSDORG00000006819	Rab5c	85	38.421
ENSDORG00000008920	Rab12	70	41.104	ENSDORG00000024129	Rab33a	68	41.104
ENSDORG00000008920	Rab12	73	41.667	ENSDORG00000029496	Rab39b	78	41.667
ENSDORG00000008920	Rab12	81	45.161	ENSDORG00000025986	Rab15	88	44.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000008920	Rab12	100	98.238	ENSG00000206418	RAB12	93	98.238	Homo_sapiens
ENSDORG00000008920	Rab12	98	90.541	ENSAMEG00000007452	RAB12	98	89.427	Ailuropoda_melanoleuca
ENSDORG00000008920	Rab12	98	87.892	ENSACIG00000020616	rab12	92	83.260	Amphilophus_citrinellus
ENSDORG00000008920	Rab12	98	87.444	ENSAOCG00000002130	rab12	91	83.929	Amphiprion_ocellaris
ENSDORG00000008920	Rab12	98	87.444	ENSAPEG00000013255	rab12	91	83.929	Amphiprion_percula
ENSDORG00000008920	Rab12	98	87.892	ENSATEG00000019683	rab12	93	83.260	Anabas_testudineus
ENSDORG00000008920	Rab12	99	96.889	ENSACAG00000003360	RAB12	87	96.889	Anolis_carolinensis
ENSDORG00000008920	Rab12	98	87.892	ENSACLG00000007696	rab12	92	83.260	Astatotilapia_calliptera
ENSDORG00000008920	Rab12	99	86.161	ENSAMXG00000004882	rab12	91	82.379	Astyanax_mexicanus
ENSDORG00000008920	Rab12	100	98.238	ENSBTAG00000010356	RAB12	93	98.238	Bos_taurus
ENSDORG00000008920	Rab12	100	98.238	ENSCJAG00000015468	RAB12	67	98.238	Callithrix_jacchus
ENSDORG00000008920	Rab12	100	98.678	ENSCAFG00020023721	RAB12	78	98.678	Canis_lupus_dingo
ENSDORG00000008920	Rab12	100	98.238	ENSCHIG00000016103	RAB12	93	98.238	Capra_hircus
ENSDORG00000008920	Rab12	93	98.095	ENSCPOG00000022689	RAB12	100	98.095	Cavia_porcellus
ENSDORG00000008920	Rab12	100	98.238	ENSCCAG00000022862	RAB12	93	98.238	Cebus_capucinus
ENSDORG00000008920	Rab12	100	98.238	ENSCATG00000037784	RAB12	94	98.238	Cercocebus_atys
ENSDORG00000008920	Rab12	100	98.238	ENSCSAG00000017569	RAB12	66	98.238	Chlorocebus_sabaeus
ENSDORG00000008920	Rab12	99	97.333	ENSCPBG00000028375	RAB12	92	97.333	Chrysemys_picta_bellii
ENSDORG00000008920	Rab12	97	98.636	ENSCANG00000031453	RAB12	100	98.636	Colobus_angolensis_palliatus
ENSDORG00000008920	Rab12	100	98.238	ENSCGRG00001006958	Rab12	77	98.238	Cricetulus_griseus_chok1gshd
ENSDORG00000008920	Rab12	98	87.892	ENSCSEG00000016933	rab12	92	83.260	Cynoglossus_semilaevis
ENSDORG00000008920	Rab12	98	87.444	ENSCVAG00000003539	rab12	91	82.819	Cyprinodon_variegatus
ENSDORG00000008920	Rab12	100	86.784	ENSDARG00000089428	rab12	88	87.019	Danio_rerio
ENSDORG00000008920	Rab12	100	99.119	ENSDNOG00000046064	RAB12	52	99.119	Dasypus_novemcinctus
ENSDORG00000008920	Rab12	81	68.649	ENSEBUG00000006581	rab12	92	66.839	Eptatretus_burgeri
ENSDORG00000008920	Rab12	100	98.678	ENSEASG00005002926	RAB12	78	98.678	Equus_asinus_asinus
ENSDORG00000008920	Rab12	100	98.678	ENSECAG00000007384	RAB12	67	98.678	Equus_caballus
ENSDORG00000008920	Rab12	100	84.141	ENSELUG00000007123	rab12	86	85.096	Esox_lucius
ENSDORG00000008920	Rab12	100	98.678	ENSFCAG00000027710	RAB12	67	98.678	Felis_catus
ENSDORG00000008920	Rab12	96	87.671	ENSFHEG00000004319	rab12	91	82.819	Fundulus_heteroclitus
ENSDORG00000008920	Rab12	82	87.701	ENSGMOG00000012335	rab12	79	87.766	Gadus_morhua
ENSDORG00000008920	Rab12	99	98.222	ENSGALG00000033608	RAB12	90	98.222	Gallus_gallus
ENSDORG00000008920	Rab12	89	85.572	ENSGACG00000016639	rab12	90	85.644	Gasterosteus_aculeatus
ENSDORG00000008920	Rab12	99	97.333	ENSGAGG00000007278	RAB12	92	97.333	Gopherus_agassizii
ENSDORG00000008920	Rab12	98	87.892	ENSHBUG00000008497	rab12	92	83.260	Haplochromis_burtoni
ENSDORG00000008920	Rab12	91	97.087	ENSHGLG00000006189	RAB12	86	95.909	Heterocephalus_glaber_female
ENSDORG00000008920	Rab12	99	85.714	ENSHCOG00000012376	rab12	91	82.143	Hippocampus_comes
ENSDORG00000008920	Rab12	99	86.726	ENSIPUG00000017401	rab12	91	83.186	Ictalurus_punctatus
ENSDORG00000008920	Rab12	100	96.476	ENSSTOG00000025122	RAB12	100	96.476	Ictidomys_tridecemlineatus
ENSDORG00000008920	Rab12	100	98.238	ENSJJAG00000019064	Rab12	99	98.238	Jaculus_jaculus
ENSDORG00000008920	Rab12	99	84.956	ENSKMAG00000020056	rab12	94	81.498	Kryptolebias_marmoratus
ENSDORG00000008920	Rab12	98	87.892	ENSLBEG00000013756	rab12	93	83.260	Labrus_bergylta
ENSDORG00000008920	Rab12	98	89.686	ENSLACG00000010461	RAB12	90	89.778	Latimeria_chalumnae
ENSDORG00000008920	Rab12	99	89.778	ENSLOCG00000002680	rab12	91	89.778	Lepisosteus_oculatus
ENSDORG00000008920	Rab12	100	98.238	ENSMFAG00000043551	RAB12	92	98.238	Macaca_fascicularis
ENSDORG00000008920	Rab12	100	98.238	ENSMNEG00000040853	RAB12	90	98.238	Macaca_nemestrina
ENSDORG00000008920	Rab12	98	87.892	ENSMAMG00000006862	rab12	93	83.260	Mastacembelus_armatus
ENSDORG00000008920	Rab12	98	87.892	ENSMZEG00005024316	rab12	92	83.260	Maylandia_zebra
ENSDORG00000008920	Rab12	90	98.039	ENSMGAG00000009197	RAB12	100	98.039	Meleagris_gallopavo
ENSDORG00000008920	Rab12	100	98.678	ENSMAUG00000008371	Rab12	77	98.678	Mesocricetus_auratus
ENSDORG00000008920	Rab12	100	97.797	ENSMICG00000030661	RAB12	95	97.797	Microcebus_murinus
ENSDORG00000008920	Rab12	96	99.543	ENSMOCG00000000452	Rab12	100	99.543	Microtus_ochrogaster
ENSDORG00000008920	Rab12	99	98.230	ENSMODG00000021452	RAB12	67	98.230	Monodelphis_domestica
ENSDORG00000008920	Rab12	99	85.714	ENSMALG00000015762	rab12	84	87.317	Monopterus_albus
ENSDORG00000008920	Rab12	100	98.238	MGP_CAROLIEiJ_G0021839	Rab12	78	98.238	Mus_caroli
ENSDORG00000008920	Rab12	100	98.238	ENSMUSG00000023460	Rab12	93	98.238	Mus_musculus
ENSDORG00000008920	Rab12	100	98.238	MGP_PahariEiJ_G0020826	Rab12	93	98.238	Mus_pahari
ENSDORG00000008920	Rab12	100	98.238	MGP_SPRETEiJ_G0022750	Rab12	78	98.238	Mus_spretus
ENSDORG00000008920	Rab12	100	98.678	ENSMLUG00000002883	RAB12	93	98.678	Myotis_lucifugus
ENSDORG00000008920	Rab12	99	86.607	ENSNGAG00000019722	-	93	86.344	Nannospalax_galili
ENSDORG00000008920	Rab12	100	97.357	ENSNGAG00000024103	-	97	97.357	Nannospalax_galili
ENSDORG00000008920	Rab12	98	87.892	ENSNBRG00000014428	rab12	92	83.260	Neolamprologus_brichardi
ENSDORG00000008920	Rab12	100	98.678	ENSNLEG00000006939	RAB12	93	98.678	Nomascus_leucogenys
ENSDORG00000008920	Rab12	100	97.797	ENSMEUG00000000493	RAB12	92	97.797	Notamacropus_eugenii
ENSDORG00000008920	Rab12	96	98.174	ENSODEG00000006414	RAB12	100	98.174	Octodon_degus
ENSDORG00000008920	Rab12	98	87.892	ENSONIG00000018469	rab12	91	84.375	Oreochromis_niloticus
ENSDORG00000008920	Rab12	98	87.892	ENSORLG00000003902	rab12	93	83.260	Oryzias_latipes
ENSDORG00000008920	Rab12	98	87.892	ENSORLG00020005131	rab12	93	83.260	Oryzias_latipes_hni
ENSDORG00000008920	Rab12	98	87.892	ENSORLG00015007869	rab12	93	83.260	Oryzias_latipes_hsok
ENSDORG00000008920	Rab12	98	87.892	ENSOMEG00000008191	rab12	93	83.260	Oryzias_melastigma
ENSDORG00000008920	Rab12	93	99.524	ENSOGAG00000028002	RAB12	99	99.524	Otolemur_garnettii
ENSDORG00000008920	Rab12	93	97.619	ENSOARG00000000728	RAB12	94	92.982	Ovis_aries
ENSDORG00000008920	Rab12	91	99.029	ENSPPAG00000009152	RAB12	97	99.029	Pan_paniscus
ENSDORG00000008920	Rab12	100	98.678	ENSPPRG00000024521	RAB12	93	98.678	Panthera_pardus
ENSDORG00000008920	Rab12	100	98.238	ENSPTRG00000009853	RAB12	93	98.238	Pan_troglodytes
ENSDORG00000008920	Rab12	100	98.678	ENSPANG00000009320	RAB12	92	98.678	Papio_anubis
ENSDORG00000008920	Rab12	84	91.053	ENSPKIG00000008579	rab12	94	85.022	Paramormyrops_kingsleyae
ENSDORG00000008920	Rab12	96	85.780	ENSPMGG00000001890	rab12	86	85.577	Periophthalmus_magnuspinnatus
ENSDORG00000008920	Rab12	100	99.119	ENSPEMG00000021032	Rab12	78	99.119	Peromyscus_maniculatus_bairdii
ENSDORG00000008920	Rab12	99	98.230	ENSPCIG00000010453	RAB12	56	98.230	Phascolarctos_cinereus
ENSDORG00000008920	Rab12	99	85.398	ENSPFOG00000001579	rab12	91	82.589	Poecilia_formosa
ENSDORG00000008920	Rab12	99	85.398	ENSPLAG00000013594	rab12	91	82.589	Poecilia_latipinna
ENSDORG00000008920	Rab12	99	85.398	ENSPMEG00000010417	rab12	91	82.589	Poecilia_mexicana
ENSDORG00000008920	Rab12	99	85.398	ENSPREG00000017487	rab12	91	82.589	Poecilia_reticulata
ENSDORG00000008920	Rab12	100	98.238	ENSPPYG00000009015	-	67	98.238	Pongo_abelii
ENSDORG00000008920	Rab12	100	98.678	ENSPCAG00000015007	RAB12	93	98.678	Procavia_capensis
ENSDORG00000008920	Rab12	100	97.797	ENSPCOG00000019816	RAB12	93	97.797	Propithecus_coquereli
ENSDORG00000008920	Rab12	100	98.238	ENSPVAG00000002757	RAB12	93	98.238	Pteropus_vampyrus
ENSDORG00000008920	Rab12	98	87.892	ENSPNYG00000023905	rab12	92	83.260	Pundamilia_nyererei
ENSDORG00000008920	Rab12	98	87.892	ENSPNYG00000005654	rab12	92	83.260	Pundamilia_nyererei
ENSDORG00000008920	Rab12	99	87.946	ENSPNAG00000015031	rab12	91	84.141	Pygocentrus_nattereri
ENSDORG00000008920	Rab12	100	90.435	ENSRNOG00000019295	Rab12	93	90.870	Rattus_norvegicus
ENSDORG00000008920	Rab12	100	98.238	ENSRBIG00000028760	RAB12	97	98.238	Rhinopithecus_bieti
ENSDORG00000008920	Rab12	100	98.238	ENSRROG00000019249	RAB12	95	98.238	Rhinopithecus_roxellana
ENSDORG00000008920	Rab12	92	98.565	ENSSBOG00000021125	RAB12	80	98.565	Saimiri_boliviensis_boliviensis
ENSDORG00000008920	Rab12	91	96.602	ENSSHAG00000001489	RAB12	91	96.602	Sarcophilus_harrisii
ENSDORG00000008920	Rab12	96	87.215	ENSSMAG00000012678	rab12	93	82.379	Scophthalmus_maximus
ENSDORG00000008920	Rab12	98	87.892	ENSSDUG00000008505	rab12	93	83.260	Seriola_dumerili
ENSDORG00000008920	Rab12	98	87.892	ENSSLDG00000022239	rab12	93	83.260	Seriola_lalandi_dorsalis
ENSDORG00000008920	Rab12	99	97.333	ENSSPUG00000003222	RAB12	91	97.333	Sphenodon_punctatus
ENSDORG00000008920	Rab12	98	87.892	ENSSPAG00000010822	rab12	92	83.260	Stegastes_partitus
ENSDORG00000008920	Rab12	100	98.678	ENSSSCG00000038026	RAB12	93	98.678	Sus_scrofa
ENSDORG00000008920	Rab12	100	96.476	ENSTGUG00000009889	RAB12	91	96.476	Taeniopygia_guttata
ENSDORG00000008920	Rab12	100	85.903	ENSTRUG00000024455	rab12	93	82.379	Takifugu_rubripes
ENSDORG00000008920	Rab12	99	86.283	ENSTNIG00000014859	rab12	92	82.743	Tetraodon_nigroviridis
ENSDORG00000008920	Rab12	98	97.748	ENSTTRG00000008711	RAB12	100	97.748	Tursiops_truncatus
ENSDORG00000008920	Rab12	100	98.678	ENSUAMG00000018092	RAB12	93	98.678	Ursus_americanus
ENSDORG00000008920	Rab12	99	96.889	ENSVVUG00000011748	RAB12	100	96.889	Vulpes_vulpes
ENSDORG00000008920	Rab12	100	92.982	ENSXETG00000004289	rab12	73	92.982	Xenopus_tropicalis
ENSDORG00000008920	Rab12	99	85.398	ENSXCOG00000019310	rab12	91	82.589	Xiphophorus_couchianus
ENSDORG00000008920	Rab12	99	85.841	ENSXMAG00000023617	rab12	91	83.036	Xiphophorus_maculatus