EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000009046 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 39724 bases
Position: chrKN672489.1:1372284-1412007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008496	zf-CCHC	PF00098.23	9.2e-15	1	3
ENSDORP00000008496	zf-CCHC	PF00098.23	9.2e-15	2	3
ENSDORP00000008496	zf-CCHC	PF00098.23	9.2e-15	3	3
ENSDORP00000021662	zf-CCHC	PF00098.23	1e-10	1	2
ENSDORP00000021662	zf-CCHC	PF00098.23	1e-10	2	2
ENSDORP00000021662	PAP_assoc	PF03828.19	3.2e-15	1	1
ENSDORP00000008496	PAP_assoc	PF03828.19	6.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000024521	-	1173	-	ENSDORP00000021662	390 (aa)	-	UPI000BACEE9B
ENSDORT00000009048	-	2325	-	ENSDORP00000008496	774 (aa)	-	UPI000BAD2369

Gene Model

Click here to download ENSDORG00000009046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000009046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000009046	-	97	96.316	ENSG00000083223	TUT7	96	96.316	Homo_sapiens
ENSDORG00000009046	-	94	55.419	ENSAPOG00000012979	TUT7	74	58.347	Acanthochromis_polyacanthus
ENSDORG00000009046	-	97	86.603	ENSAMEG00000004148	TUT7	77	80.000	Ailuropoda_melanoleuca
ENSDORG00000009046	-	53	70.690	ENSAOCG00000004223	-	57	53.906	Amphiprion_ocellaris
ENSDORG00000009046	-	92	58.217	ENSAPEG00000014922	-	88	58.286	Amphiprion_percula
ENSDORG00000009046	-	97	74.880	ENSAPLG00000015510	TUT7	75	70.336	Anas_platyrhynchos
ENSDORG00000009046	-	51	83.208	ENSACAG00000000279	TUT7	77	83.208	Anolis_carolinensis
ENSDORG00000009046	-	97	96.579	ENSANAG00000025848	TUT7	96	96.579	Aotus_nancymaae
ENSDORG00000009046	-	96	55.932	ENSACLG00000018198	TUT7	68	64.286	Astatotilapia_calliptera
ENSDORG00000009046	-	97	86.842	ENSBTAG00000001737	TUT7	81	82.487	Bos_taurus
ENSDORG00000009046	-	97	96.579	ENSCJAG00000001845	TUT7	96	96.579	Callithrix_jacchus
ENSDORG00000009046	-	97	86.603	ENSCAFG00000001331	TUT7	77	80.506	Canis_familiaris
ENSDORG00000009046	-	97	90.789	ENSCAFG00020023620	TUT7	96	90.789	Canis_lupus_dingo
ENSDORG00000009046	-	97	86.603	ENSCHIG00000017690	TUT7	81	82.868	Capra_hircus
ENSDORG00000009046	-	97	95.000	ENSTSYG00000008907	TUT7	96	95.000	Carlito_syrichta
ENSDORG00000009046	-	96	75.696	ENSCPOG00000002500	TUT7	71	80.195	Cavia_porcellus
ENSDORG00000009046	-	97	96.316	ENSCATG00000032888	TUT7	96	96.316	Cercocebus_atys
ENSDORG00000009046	-	97	82.775	ENSCLAG00000007535	TUT7	77	79.381	Chinchilla_lanigera
ENSDORG00000009046	-	97	87.321	ENSCSAG00000007408	TUT7	81	83.312	Chlorocebus_sabaeus
ENSDORG00000009046	-	99	75.607	ENSCHOG00000011129	TUT7	77	75.734	Choloepus_hoffmanni
ENSDORG00000009046	-	97	67.527	ENSCPBG00000005272	TUT7	67	75.602	Chrysemys_picta_bellii
ENSDORG00000009046	-	97	96.053	ENSCANG00000035790	TUT7	96	96.053	Colobus_angolensis_palliatus
ENSDORG00000009046	-	92	83.417	ENSCGRG00001020605	-	76	77.530	Cricetulus_griseus_chok1gshd
ENSDORG00000009046	-	97	76.356	ENSCGRG00000016585	-	77	71.514	Cricetulus_griseus_crigri
ENSDORG00000009046	-	92	55.639	ENSCSEG00000007068	TUT7	77	58.194	Cynoglossus_semilaevis
ENSDORG00000009046	-	92	52.750	ENSCVAG00000012526	-	71	60.935	Cyprinodon_variegatus
ENSDORG00000009046	-	96	82.345	ENSDNOG00000010663	TUT7	72	90.047	Dasypus_novemcinctus
ENSDORG00000009046	-	85	84.119	ENSETEG00000007739	TUT7	61	84.119	Echinops_telfairi
ENSDORG00000009046	-	97	85.885	ENSEASG00005020165	TUT7	77	82.174	Equus_asinus_asinus
ENSDORG00000009046	-	97	85.885	ENSECAG00000014831	TUT7	77	82.174	Equus_caballus
ENSDORG00000009046	-	94	66.486	ENSEEUG00000012794	TUT7	71	66.485	Erinaceus_europaeus
ENSDORG00000009046	-	94	62.712	ENSELUG00000013049	-	93	71.845	Esox_lucius
ENSDORG00000009046	-	97	94.474	ENSFCAG00000003491	TUT7	96	94.474	Felis_catus
ENSDORG00000009046	-	97	74.163	ENSFALG00000003541	TUT7	71	72.688	Ficedula_albicollis
ENSDORG00000009046	-	98	75.887	ENSFDAG00000002315	TUT7	73	80.754	Fukomys_damarensis
ENSDORG00000009046	-	97	53.699	ENSFHEG00000004770	-	74	61.023	Fundulus_heteroclitus
ENSDORG00000009046	-	66	68.367	ENSGMOG00000001464	-	67	75.181	Gadus_morhua
ENSDORG00000009046	-	92	73.300	ENSGALG00000012607	ZCCHC6	69	73.303	Gallus_gallus
ENSDORG00000009046	-	85	59.697	ENSGAFG00000017138	-	92	61.059	Gambusia_affinis
ENSDORG00000009046	-	66	68.243	ENSGACG00000004735	TUT7	77	67.460	Gasterosteus_aculeatus
ENSDORG00000009046	-	94	69.877	ENSGAGG00000013087	TUT7	68	72.932	Gopherus_agassizii
ENSDORG00000009046	-	97	96.579	ENSGGOG00000007523	ZCCHC6	96	96.579	Gorilla_gorilla
ENSDORG00000009046	-	93	56.948	ENSHBUG00000011514	-	94	58.974	Haplochromis_burtoni
ENSDORG00000009046	-	96	79.808	ENSHGLG00000018427	TUT7	75	79.057	Heterocephalus_glaber_female
ENSDORG00000009046	-	96	79.567	ENSHGLG00100004701	TUT7	75	78.918	Heterocephalus_glaber_male
ENSDORG00000009046	-	91	62.712	ENSHCOG00000006100	-	93	63.218	Hippocampus_comes
ENSDORG00000009046	-	97	83.420	ENSSTOG00000000586	TUT7	78	83.553	Ictidomys_tridecemlineatus
ENSDORG00000009046	-	97	93.158	ENSJJAG00000000106	-	98	93.158	Jaculus_jaculus
ENSDORG00000009046	-	96	61.905	ENSKMAG00000005782	-	99	61.905	Kryptolebias_marmoratus
ENSDORG00000009046	-	96	64.833	ENSLACG00000001637	TUT7	64	64.368	Latimeria_chalumnae
ENSDORG00000009046	-	91	61.905	ENSLOCG00000002472	TUT7	65	65.686	Lepisosteus_oculatus
ENSDORG00000009046	-	100	75.893	ENSLAFG00000007884	TUT7	93	75.765	Loxodonta_africana
ENSDORG00000009046	-	97	96.053	ENSMFAG00000000971	TUT7	96	96.053	Macaca_fascicularis
ENSDORG00000009046	-	97	96.316	ENSMMUG00000003401	TUT7	96	96.316	Macaca_mulatta
ENSDORG00000009046	-	97	96.316	ENSMNEG00000031427	TUT7	96	96.316	Macaca_nemestrina
ENSDORG00000009046	-	97	96.316	ENSMLEG00000027049	TUT7	96	96.316	Mandrillus_leucophaeus
ENSDORG00000009046	-	73	73.239	ENSMAMG00000011815	TUT7	92	62.393	Mastacembelus_armatus
ENSDORG00000009046	-	93	55.693	ENSMZEG00005012809	TUT7	66	65.835	Maylandia_zebra
ENSDORG00000009046	-	97	58.974	ENSMGAG00000006542	TUT7	75	62.607	Meleagris_gallopavo
ENSDORG00000009046	-	97	84.928	ENSMAUG00000006963	-	77	78.289	Mesocricetus_auratus
ENSDORG00000009046	-	94	96.438	ENSMICG00000016944	TUT7	100	96.438	Microcebus_murinus
ENSDORG00000009046	-	97	93.158	ENSMOCG00000007812	-	96	93.158	Microtus_ochrogaster
ENSDORG00000009046	-	94	73.515	ENSMODG00000003542	TUT7	73	74.341	Monodelphis_domestica
ENSDORG00000009046	-	91	60.452	ENSMALG00000000634	TUT7	87	59.710	Monopterus_albus
ENSDORG00000009046	-	99	73.861	MGP_CAROLIEiJ_G0018612	-	78	73.501	Mus_caroli
ENSDORG00000009046	-	97	83.254	ENSMUSG00000035248	Tut7	93	77.665	Mus_musculus
ENSDORG00000009046	-	92	81.910	MGP_PahariEiJ_G0019676	-	76	75.616	Mus_pahari
ENSDORG00000009046	-	92	82.915	MGP_SPRETEiJ_G0019491	-	87	73.735	Mus_spretus
ENSDORG00000009046	-	100	76.105	ENSMPUG00000002191	TUT7	73	80.366	Mustela_putorius_furo
ENSDORG00000009046	-	97	83.493	ENSMLUG00000001298	TUT7	77	79.231	Myotis_lucifugus
ENSDORG00000009046	-	97	93.947	ENSNGAG00000022758	-	97	93.947	Nannospalax_galili
ENSDORG00000009046	-	93	53.616	ENSNBRG00000021961	TUT7	67	63.774	Neolamprologus_brichardi
ENSDORG00000009046	-	97	95.789	ENSNLEG00000005138	TUT7	96	95.789	Nomascus_leucogenys
ENSDORG00000009046	-	99	73.745	ENSOPRG00000002893	TUT7	57	73.745	Ochotona_princeps
ENSDORG00000009046	-	97	91.579	ENSODEG00000006904	-	96	91.579	Octodon_degus
ENSDORG00000009046	-	72	63.385	ENSONIG00000017001	TUT7	74	71.681	Oreochromis_niloticus
ENSDORG00000009046	-	97	84.689	ENSOCUG00000010949	TUT7	73	79.371	Oryctolagus_cuniculus
ENSDORG00000009046	-	90	50.141	ENSORLG00000001714	-	94	50.000	Oryzias_latipes
ENSDORG00000009046	-	94	45.854	ENSORLG00020007882	-	69	56.215	Oryzias_latipes_hni
ENSDORG00000009046	-	94	45.144	ENSORLG00015017233	-	67	50.936	Oryzias_latipes_hsok
ENSDORG00000009046	-	92	59.384	ENSOMEG00000015528	-	81	60.458	Oryzias_melastigma
ENSDORG00000009046	-	100	84.949	ENSOGAG00000015630	TUT7	77	84.949	Otolemur_garnettii
ENSDORG00000009046	-	100	77.964	ENSOARG00000008732	TUT7	77	82.152	Ovis_aries
ENSDORG00000009046	-	97	96.579	ENSPPAG00000038548	TUT7	96	96.579	Pan_paniscus
ENSDORG00000009046	-	97	94.211	ENSPPRG00000011084	TUT7	96	94.211	Panthera_pardus
ENSDORG00000009046	-	97	94.211	ENSPTIG00000007881	TUT7	96	94.211	Panthera_tigris_altaica
ENSDORG00000009046	-	97	96.579	ENSPTRG00000021076	TUT7	96	96.579	Pan_troglodytes
ENSDORG00000009046	-	97	96.316	ENSPANG00000024890	TUT7	96	96.316	Papio_anubis
ENSDORG00000009046	-	97	58.993	ENSPKIG00000022326	TUT7	56	68.821	Paramormyrops_kingsleyae
ENSDORG00000009046	-	97	67.312	ENSPSIG00000003600	TUT7	68	75.562	Pelodiscus_sinensis
ENSDORG00000009046	-	97	58.684	ENSPMGG00000012649	-	89	60.458	Periophthalmus_magnuspinnatus
ENSDORG00000009046	-	97	84.928	ENSPEMG00000014030	-	77	78.389	Peromyscus_maniculatus_bairdii
ENSDORG00000009046	-	97	77.327	ENSPCIG00000018302	TUT7	77	74.286	Phascolarctos_cinereus
ENSDORG00000009046	-	69	66.667	ENSPFOG00000011606	-	68	75.714	Poecilia_formosa
ENSDORG00000009046	-	90	62.286	ENSPLAG00000006121	TUT7	93	63.636	Poecilia_latipinna
ENSDORG00000009046	-	90	62.286	ENSPMEG00000015937	-	93	63.636	Poecilia_mexicana
ENSDORG00000009046	-	93	54.926	ENSPREG00000009118	TUT7	82	59.667	Poecilia_reticulata
ENSDORG00000009046	-	100	84.459	ENSPPYG00000019340	TUT7	81	84.459	Pongo_abelii
ENSDORG00000009046	-	94	83.375	ENSPCAG00000011630	TUT7	50	88.660	Procavia_capensis
ENSDORG00000009046	-	97	96.053	ENSPCOG00000023407	TUT7	96	96.053	Propithecus_coquereli
ENSDORG00000009046	-	97	85.167	ENSPVAG00000004589	TUT7	63	81.664	Pteropus_vampyrus
ENSDORG00000009046	-	93	55.446	ENSPNYG00000004149	TUT7	66	65.643	Pundamilia_nyererei
ENSDORG00000009046	-	92	82.161	ENSRNOG00000016629	Tut7	76	76.974	Rattus_norvegicus
ENSDORG00000009046	-	97	96.316	ENSRBIG00000016827	TUT7	96	96.316	Rhinopithecus_bieti
ENSDORG00000009046	-	97	96.316	ENSRROG00000034432	TUT7	96	96.316	Rhinopithecus_roxellana
ENSDORG00000009046	-	95	73.930	ENSSHAG00000008290	TUT7	75	74.159	Sarcophilus_harrisii
ENSDORG00000009046	-	92	61.404	ENSSFOG00015009813	zcchc6	58	69.905	Scleropages_formosus
ENSDORG00000009046	-	88	61.159	ENSSMAG00000010045	-	90	61.947	Scophthalmus_maximus
ENSDORG00000009046	-	92	61.732	ENSSDUG00000012876	TUT7	91	62.751	Seriola_dumerili
ENSDORG00000009046	-	92	62.011	ENSSLDG00000019107	-	85	62.500	Seriola_lalandi_dorsalis
ENSDORG00000009046	-	80	71.704	ENSSARG00000009763	TUT7	67	71.613	Sorex_araneus
ENSDORG00000009046	-	92	75.315	ENSSPUG00000004029	TUT7	71	73.820	Sphenodon_punctatus
ENSDORG00000009046	-	92	60.615	ENSSPAG00000018387	-	86	61.605	Stegastes_partitus
ENSDORG00000009046	-	97	86.364	ENSSSCG00000010952	TUT7	77	81.562	Sus_scrofa
ENSDORG00000009046	-	97	73.381	ENSTGUG00000000624	TUT7	71	73.907	Taeniopygia_guttata
ENSDORG00000009046	-	92	60.784	ENSTRUG00000023807	-	87	61.891	Takifugu_rubripes
ENSDORG00000009046	-	68	64.474	ENSTNIG00000015951	TUT7	80	64.870	Tetraodon_nigroviridis
ENSDORG00000009046	-	99	74.905	ENSTBEG00000010446	TUT7	81	74.905	Tupaia_belangeri
ENSDORG00000009046	-	97	87.799	ENSTTRG00000004236	TUT7	57	85.752	Tursiops_truncatus
ENSDORG00000009046	-	97	95.789	ENSUAMG00000027094	-	96	95.789	Ursus_americanus
ENSDORG00000009046	-	93	85.821	ENSUMAG00000004929	TUT7	75	80.759	Ursus_maritimus
ENSDORG00000009046	-	99	77.905	ENSVPAG00000001946	TUT7	74	78.033	Vicugna_pacos
ENSDORG00000009046	-	97	86.603	ENSVVUG00000022427	TUT7	77	80.506	Vulpes_vulpes
ENSDORG00000009046	-	99	67.689	ENSXETG00000017552	tut7	64	69.171	Xenopus_tropicalis
ENSDORG00000009046	-	92	55.808	ENSXCOG00000009445	-	62	65.318	Xiphophorus_couchianus
ENSDORG00000009046	-	90	62.000	ENSXMAG00000028804	-	93	63.050	Xiphophorus_maculatus