EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000009103 (Gene tree)
Gene ID: -
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y box protein 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 94300 bases
Position: chrKN672427.1:485195-579494
Accession: 2137670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008549	CSD	PF00313.22	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000009102	-	1068	-	ENSDORP00000008549	355 (aa)	-	UPI000BAD24DC

Gene Model

Click here to download ENSDORG00000009103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000009103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000009103	Ybx3	81	90.592	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSDORG00000009103	Ybx3	81	94.406	ENSAMEG00000009393	YBX3	98	83.526	Ailuropoda_melanoleuca
ENSDORG00000009103	Ybx3	80	69.474	ENSAPLG00000003147	YBX3	100	69.474	Anas_platyrhynchos
ENSDORG00000009103	Ybx3	81	80.769	ENSANAG00000033366	-	67	83.333	Aotus_nancymaae
ENSDORG00000009103	Ybx3	81	90.592	ENSANAG00000024492	-	90	91.228	Aotus_nancymaae
ENSDORG00000009103	Ybx3	81	91.608	ENSBTAG00000009663	YBX3	75	88.732	Bos_taurus
ENSDORG00000009103	Ybx3	51	86.765	ENSCJAG00000033824	-	71	85.507	Callithrix_jacchus
ENSDORG00000009103	Ybx3	81	91.289	ENSCJAG00000021660	-	77	91.930	Callithrix_jacchus
ENSDORG00000009103	Ybx3	81	93.080	ENSCAFG00000013401	YBX3	84	95.076	Canis_familiaris
ENSDORG00000009103	Ybx3	81	90.559	ENSCAFG00020006412	YBX3	89	81.711	Canis_lupus_dingo
ENSDORG00000009103	Ybx3	81	91.608	ENSCHIG00000010863	YBX3	79	91.901	Capra_hircus
ENSDORG00000009103	Ybx3	91	53.354	ENSTSYG00000035821	-	85	75.000	Carlito_syrichta
ENSDORG00000009103	Ybx3	85	91.118	ENSTSYG00000004204	-	94	91.503	Carlito_syrichta
ENSDORG00000009103	Ybx3	83	88.737	ENSCAPG00000015039	YBX3	93	89.437	Cavia_aperea
ENSDORG00000009103	Ybx3	81	89.161	ENSCPOG00000011329	YBX3	100	77.247	Cavia_porcellus
ENSDORG00000009103	Ybx3	81	90.244	ENSCCAG00000016469	YBX3	90	80.896	Cebus_capucinus
ENSDORG00000009103	Ybx3	81	89.895	ENSCATG00000034411	YBX3	90	80.588	Cercocebus_atys
ENSDORG00000009103	Ybx3	88	85.942	ENSCLAG00000016030	YBX3	100	84.345	Chinchilla_lanigera
ENSDORG00000009103	Ybx3	81	90.244	ENSCSAG00000008744	YBX3	90	80.882	Chlorocebus_sabaeus
ENSDORG00000009103	Ybx3	81	80.836	ENSCPBG00000014147	YBX3	100	69.359	Chrysemys_picta_bellii
ENSDORG00000009103	Ybx3	81	90.244	ENSCANG00000036801	YBX3	90	90.877	Colobus_angolensis_palliatus
ENSDORG00000009103	Ybx3	89	85.714	ENSCGRG00001016148	Ybx3	86	85.350	Cricetulus_griseus_chok1gshd
ENSDORG00000009103	Ybx3	82	89.865	ENSCGRG00000004563	Ybx3	97	90.311	Cricetulus_griseus_crigri
ENSDORG00000009103	Ybx3	80	83.916	ENSETEG00000002557	YBX3	99	82.042	Echinops_telfairi
ENSDORG00000009103	Ybx3	81	87.762	ENSEASG00005014726	YBX3	84	90.566	Equus_asinus_asinus
ENSDORG00000009103	Ybx3	81	91.608	ENSECAG00000013777	YBX3	90	82.596	Equus_caballus
ENSDORG00000009103	Ybx3	80	89.437	ENSEEUG00000010415	YBX3	100	89.789	Erinaceus_europaeus
ENSDORG00000009103	Ybx3	81	91.638	ENSFCAG00000027748	YBX3	90	82.647	Felis_catus
ENSDORG00000009103	Ybx3	80	66.899	ENSFALG00000003661	YBX3	100	64.014	Ficedula_albicollis
ENSDORG00000009103	Ybx3	83	86.735	ENSFDAG00000021192	YBX3	91	87.676	Fukomys_damarensis
ENSDORG00000009103	Ybx3	81	61.324	ENSGALG00000031890	YBX3	68	100.000	Gallus_gallus
ENSDORG00000009103	Ybx3	81	79.443	ENSGAGG00000017780	YBX3	98	69.034	Gopherus_agassizii
ENSDORG00000009103	Ybx3	81	90.592	ENSGGOG00000001352	YBX3	90	81.176	Gorilla_gorilla
ENSDORG00000009103	Ybx3	81	77.241	ENSHGLG00000014798	-	99	70.206	Heterocephalus_glaber_female
ENSDORG00000009103	Ybx3	75	78.947	ENSHGLG00000015495	-	100	67.552	Heterocephalus_glaber_female
ENSDORG00000009103	Ybx3	58	95.833	ENSHGLG00100003589	YBX3	86	67.018	Heterocephalus_glaber_male
ENSDORG00000009103	Ybx3	81	89.860	ENSSTOG00000032577	-	92	78.466	Ictidomys_tridecemlineatus
ENSDORG00000009103	Ybx3	83	85.714	ENSSTOG00000002108	-	88	86.268	Ictidomys_tridecemlineatus
ENSDORG00000009103	Ybx3	81	67.361	ENSJJAG00000014239	Ybx3	90	84.615	Jaculus_jaculus
ENSDORG00000009103	Ybx3	81	94.056	ENSLAFG00000017247	YBX3	99	78.902	Loxodonta_africana
ENSDORG00000009103	Ybx3	81	90.244	ENSMFAG00000039369	YBX3	90	80.882	Macaca_fascicularis
ENSDORG00000009103	Ybx3	81	90.244	ENSMMUG00000022469	YBX3	88	90.877	Macaca_mulatta
ENSDORG00000009103	Ybx3	81	90.244	ENSMNEG00000045109	YBX3	90	80.896	Macaca_nemestrina
ENSDORG00000009103	Ybx3	92	84.639	ENSMLEG00000033618	YBX3	80	92.254	Mandrillus_leucophaeus
ENSDORG00000009103	Ybx3	80	68.531	ENSMGAG00000014224	YBX3	92	100.000	Meleagris_gallopavo
ENSDORG00000009103	Ybx3	95	80.115	ENSMAUG00000012185	Ybx3	98	85.032	Mesocricetus_auratus
ENSDORG00000009103	Ybx3	81	94.056	ENSMICG00000038002	-	90	84.911	Microcebus_murinus
ENSDORG00000009103	Ybx3	80	80.899	ENSMICG00000031459	-	90	81.429	Microcebus_murinus
ENSDORG00000009103	Ybx3	89	86.076	ENSMOCG00000016291	Ybx3	99	87.662	Microtus_ochrogaster
ENSDORG00000009103	Ybx3	83	84.014	ENSMODG00000018248	YBX3	91	84.912	Monodelphis_domestica
ENSDORG00000009103	Ybx3	89	85.714	MGP_CAROLIEiJ_G0028947	Ybx3	91	82.979	Mus_caroli
ENSDORG00000009103	Ybx3	89	85.079	ENSMUSG00000030189	Ybx3	91	82.371	Mus_musculus
ENSDORG00000009103	Ybx3	89	85.714	MGP_PahariEiJ_G0022709	Ybx3	91	82.979	Mus_pahari
ENSDORG00000009103	Ybx3	89	85.397	MGP_SPRETEiJ_G0029994	Ybx3	91	82.675	Mus_spretus
ENSDORG00000009103	Ybx3	81	73.898	ENSMPUG00000011810	YBX3	90	66.379	Mustela_putorius_furo
ENSDORG00000009103	Ybx3	74	91.450	ENSMLUG00000007476	YBX3	100	89.219	Myotis_lucifugus
ENSDORG00000009103	Ybx3	79	86.620	ENSNGAG00000000710	Ybx3	85	88.660	Nannospalax_galili
ENSDORG00000009103	Ybx3	81	88.153	ENSNLEG00000034844	YBX3	96	77.193	Nomascus_leucogenys
ENSDORG00000009103	Ybx3	58	69.082	ENSMEUG00000002507	-	97	69.082	Notamacropus_eugenii
ENSDORG00000009103	Ybx3	76	86.617	ENSODEG00000017957	YBX3	94	78.769	Octodon_degus
ENSDORG00000009103	Ybx3	81	88.462	ENSOCUG00000001889	YBX3	81	89.680	Oryctolagus_cuniculus
ENSDORG00000009103	Ybx3	81	91.126	ENSOGAG00000013245	YBX3	90	82.609	Otolemur_garnettii
ENSDORG00000009103	Ybx3	81	83.333	ENSOARG00000020919	YBX3	96	83.566	Ovis_aries
ENSDORG00000009103	Ybx3	81	90.592	ENSPPAG00000039068	YBX3	79	91.228	Pan_paniscus
ENSDORG00000009103	Ybx3	81	91.986	ENSPPRG00000005859	YBX3	90	82.941	Panthera_pardus
ENSDORG00000009103	Ybx3	80	94.366	ENSPTIG00000005322	YBX3	80	94.366	Panthera_tigris_altaica
ENSDORG00000009103	Ybx3	81	90.592	ENSPTRG00000004681	YBX3	90	81.176	Pan_troglodytes
ENSDORG00000009103	Ybx3	81	89.895	ENSPANG00000010280	YBX3	90	80.588	Papio_anubis
ENSDORG00000009103	Ybx3	59	99.038	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSDORG00000009103	Ybx3	89	86.032	ENSPEMG00000012132	-	99	85.669	Peromyscus_maniculatus_bairdii
ENSDORG00000009103	Ybx3	64	84.685	ENSPEMG00000010391	-	80	88.000	Peromyscus_maniculatus_bairdii
ENSDORG00000009103	Ybx3	73	81.467	ENSPCIG00000029949	YBX3	100	81.467	Phascolarctos_cinereus
ENSDORG00000009103	Ybx3	81	90.244	ENSPPYG00000004279	YBX3	90	80.882	Pongo_abelii
ENSDORG00000009103	Ybx3	58	94.203	ENSPCAG00000001397	YBX3	86	81.569	Procavia_capensis
ENSDORG00000009103	Ybx3	81	78.049	ENSPVAG00000006740	YBX3	66	82.745	Pteropus_vampyrus
ENSDORG00000009103	Ybx3	89	86.032	ENSRNOG00000005480	Ybx3	91	83.283	Rattus_norvegicus
ENSDORG00000009103	Ybx3	81	90.244	ENSRBIG00000039208	YBX3	90	80.588	Rhinopithecus_bieti
ENSDORG00000009103	Ybx3	81	90.244	ENSRROG00000029638	YBX3	90	80.882	Rhinopithecus_roxellana
ENSDORG00000009103	Ybx3	83	92.517	ENSSBOG00000030573	YBX3	84	91.228	Saimiri_boliviensis_boliviensis
ENSDORG00000009103	Ybx3	80	79.381	ENSSHAG00000003262	YBX3	98	79.725	Sarcophilus_harrisii
ENSDORG00000009103	Ybx3	81	92.334	ENSSSCG00000000633	YBX3	89	81.844	Sus_scrofa
ENSDORG00000009103	Ybx3	80	67.832	ENSTGUG00000012047	YBX3	100	67.133	Taeniopygia_guttata
ENSDORG00000009103	Ybx3	81	91.638	ENSTBEG00000012570	YBX3	78	92.606	Tupaia_belangeri
ENSDORG00000009103	Ybx3	74	83.083	ENSTTRG00000008045	YBX3	100	83.459	Tursiops_truncatus
ENSDORG00000009103	Ybx3	78	90.975	ENSUAMG00000016662	YBX3	100	90.975	Ursus_americanus
ENSDORG00000009103	Ybx3	80	94.366	ENSUMAG00000016118	YBX3	94	94.366	Ursus_maritimus
ENSDORG00000009103	Ybx3	80	67.820	ENSVPAG00000000876	YBX3	100	67.820	Vicugna_pacos
ENSDORG00000009103	Ybx3	78	90.975	ENSVVUG00000004956	YBX3	100	90.975	Vulpes_vulpes
ENSDORG00000009103	Ybx3	55	92.045	ENSXETG00000016239	ybx3	98	55.625	Xenopus_tropicalis