EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000009134 (Gene tree)
Gene ID: 105980601
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 18518 bases
Position: chrKN672356.1:14838596-14857113
Accession: 105980601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008579	RNase_Zc3h12a	PF11977.8	2.2e-65	1	1
ENSDORP00000018150	RNase_Zc3h12a	PF11977.8	2.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000009134	-	2634	XM_013009481	ENSDORP00000008579	877 (aa)	XP_012864935	UPI000BAD2175
ENSDORT00000031510	-	2670	-	ENSDORP00000018150	889 (aa)	-	UPI000BACF871

Gene Model

Click here to download ENSDORG00000009134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000009134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000009134	Zc3h12c	94	52.859	ENSDORG00000024832	Zc3h12b	95	54.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000009134	Zc3h12c	99	90.525	ENSG00000149289	ZC3H12C	100	90.962	Homo_sapiens
ENSDORG00000009134	Zc3h12c	99	89.954	ENSAMEG00000009188	ZC3H12C	99	89.954	Ailuropoda_melanoleuca
ENSDORG00000009134	Zc3h12c	71	87.680	ENSAPLG00000002854	ZC3H12C	100	87.680	Anas_platyrhynchos
ENSDORG00000009134	Zc3h12c	99	82.025	ENSACAG00000001031	ZC3H12C	97	81.684	Anolis_carolinensis
ENSDORG00000009134	Zc3h12c	99	90.868	ENSANAG00000026999	ZC3H12C	99	90.868	Aotus_nancymaae
ENSDORG00000009134	Zc3h12c	99	89.396	ENSBTAG00000008732	ZC3H12C	99	89.396	Bos_taurus
ENSDORG00000009134	Zc3h12c	99	90.297	ENSCJAG00000010319	ZC3H12C	99	90.297	Callithrix_jacchus
ENSDORG00000009134	Zc3h12c	99	87.457	ENSCAFG00000014297	ZC3H12C	99	87.457	Canis_familiaris
ENSDORG00000009134	Zc3h12c	100	87.358	ENSCAFG00020006999	ZC3H12C	99	87.457	Canis_lupus_dingo
ENSDORG00000009134	Zc3h12c	99	89.510	ENSCHIG00000021221	ZC3H12C	99	89.510	Capra_hircus
ENSDORG00000009134	Zc3h12c	95	88.497	ENSTSYG00000005412	ZC3H12C	99	88.497	Carlito_syrichta
ENSDORG00000009134	Zc3h12c	100	87.343	ENSCAPG00000011610	ZC3H12C	100	87.144	Cavia_aperea
ENSDORG00000009134	Zc3h12c	100	87.229	ENSCPOG00000032962	ZC3H12C	99	87.329	Cavia_porcellus
ENSDORG00000009134	Zc3h12c	99	90.868	ENSCCAG00000022395	ZC3H12C	100	91.197	Cebus_capucinus
ENSDORG00000009134	Zc3h12c	99	90.982	ENSCATG00000041641	ZC3H12C	99	90.982	Cercocebus_atys
ENSDORG00000009134	Zc3h12c	99	90.982	ENSCLAG00000012577	ZC3H12C	100	91.197	Chinchilla_lanigera
ENSDORG00000009134	Zc3h12c	99	90.639	ENSCSAG00000002945	ZC3H12C	99	90.639	Chlorocebus_sabaeus
ENSDORG00000009134	Zc3h12c	99	84.396	ENSCHOG00000013202	-	99	84.738	Choloepus_hoffmanni
ENSDORG00000009134	Zc3h12c	99	83.409	ENSCPBG00000021043	ZC3H12C	100	83.411	Chrysemys_picta_bellii
ENSDORG00000009134	Zc3h12c	99	90.525	ENSCANG00000040994	ZC3H12C	99	90.525	Colobus_angolensis_palliatus
ENSDORG00000009134	Zc3h12c	99	91.438	ENSCGRG00001013672	Zc3h12c	99	91.438	Cricetulus_griseus_chok1gshd
ENSDORG00000009134	Zc3h12c	99	91.438	ENSCGRG00000001308	Zc3h12c	99	90.258	Cricetulus_griseus_crigri
ENSDORG00000009134	Zc3h12c	100	88.623	ENSDNOG00000013040	ZC3H12C	99	88.623	Dasypus_novemcinctus
ENSDORG00000009134	Zc3h12c	71	94.880	ENSETEG00000008027	ZC3H12C	100	94.880	Echinops_telfairi
ENSDORG00000009134	Zc3h12c	99	90.411	ENSEASG00005010098	ZC3H12C	99	90.411	Equus_asinus_asinus
ENSDORG00000009134	Zc3h12c	99	90.411	ENSECAG00000000462	ZC3H12C	100	90.845	Equus_caballus
ENSDORG00000009134	Zc3h12c	65	89.825	ENSEEUG00000005709	-	99	89.825	Erinaceus_europaeus
ENSDORG00000009134	Zc3h12c	100	88.597	ENSFCAG00000010665	ZC3H12C	99	88.699	Felis_catus
ENSDORG00000009134	Zc3h12c	99	82.520	ENSFALG00000008776	ZC3H12C	99	82.520	Ficedula_albicollis
ENSDORG00000009134	Zc3h12c	99	91.667	ENSFDAG00000017997	ZC3H12C	100	92.136	Fukomys_damarensis
ENSDORG00000009134	Zc3h12c	97	82.030	ENSGALG00000017154	ZC3H12C	100	82.030	Gallus_gallus
ENSDORG00000009134	Zc3h12c	95	82.113	ENSGAGG00000024154	ZC3H12C	86	81.851	Gopherus_agassizii
ENSDORG00000009134	Zc3h12c	99	90.297	ENSGGOG00000010117	ZC3H12C	99	90.297	Gorilla_gorilla
ENSDORG00000009134	Zc3h12c	99	91.324	ENSHGLG00000019021	ZC3H12C	99	91.324	Heterocephalus_glaber_female
ENSDORG00000009134	Zc3h12c	99	91.324	ENSHGLG00100007295	ZC3H12C	99	91.324	Heterocephalus_glaber_male
ENSDORG00000009134	Zc3h12c	99	92.580	ENSSTOG00000022143	ZC3H12C	100	92.580	Ictidomys_tridecemlineatus
ENSDORG00000009134	Zc3h12c	99	91.781	ENSJJAG00000001147	Zc3h12c	100	91.781	Jaculus_jaculus
ENSDORG00000009134	Zc3h12c	99	74.045	ENSLACG00000009305	ZC3H12C	99	73.933	Latimeria_chalumnae
ENSDORG00000009134	Zc3h12c	71	94.258	ENSLAFG00000016296	ZC3H12C	100	94.258	Loxodonta_africana
ENSDORG00000009134	Zc3h12c	99	90.982	ENSMFAG00000042068	ZC3H12C	99	90.982	Macaca_fascicularis
ENSDORG00000009134	Zc3h12c	99	90.982	ENSMMUG00000048435	ZC3H12C	99	90.982	Macaca_mulatta
ENSDORG00000009134	Zc3h12c	99	90.982	ENSMNEG00000032663	ZC3H12C	100	91.432	Macaca_nemestrina
ENSDORG00000009134	Zc3h12c	99	90.868	ENSMLEG00000032083	ZC3H12C	99	90.868	Mandrillus_leucophaeus
ENSDORG00000009134	Zc3h12c	99	80.952	ENSMGAG00000015143	ZC3H12C	99	80.952	Meleagris_gallopavo
ENSDORG00000009134	Zc3h12c	100	90.433	ENSMAUG00000020412	Zc3h12c	100	90.433	Mesocricetus_auratus
ENSDORG00000009134	Zc3h12c	99	91.667	ENSMICG00000011455	ZC3H12C	100	92.136	Microcebus_murinus
ENSDORG00000009134	Zc3h12c	100	92.018	ENSMOCG00000020090	Zc3h12c	99	92.018	Microtus_ochrogaster
ENSDORG00000009134	Zc3h12c	97	87.150	ENSMODG00000014555	ZC3H12C	100	86.682	Monodelphis_domestica
ENSDORG00000009134	Zc3h12c	99	90.868	MGP_CAROLIEiJ_G0032210	Zc3h12c	99	90.868	Mus_caroli
ENSDORG00000009134	Zc3h12c	99	91.438	ENSMUSG00000035164	Zc3h12c	99	91.438	Mus_musculus
ENSDORG00000009134	Zc3h12c	99	90.411	MGP_PahariEiJ_G0015078	Zc3h12c	99	90.411	Mus_pahari
ENSDORG00000009134	Zc3h12c	99	91.096	MGP_SPRETEiJ_G0033350	Zc3h12c	99	91.096	Mus_spretus
ENSDORG00000009134	Zc3h12c	99	86.187	ENSMPUG00000005888	ZC3H12C	99	85.011	Mustela_putorius_furo
ENSDORG00000009134	Zc3h12c	99	89.041	ENSMLUG00000017189	ZC3H12C	100	89.041	Myotis_lucifugus
ENSDORG00000009134	Zc3h12c	100	91.904	ENSNGAG00000023957	Zc3h12c	99	92.009	Nannospalax_galili
ENSDORG00000009134	Zc3h12c	99	90.753	ENSNLEG00000029829	ZC3H12C	99	90.753	Nomascus_leucogenys
ENSDORG00000009134	Zc3h12c	99	83.959	ENSMEUG00000015398	ZC3H12C	100	83.732	Notamacropus_eugenii
ENSDORG00000009134	Zc3h12c	72	82.409	ENSOPRG00000003370	-	96	82.409	Ochotona_princeps
ENSDORG00000009134	Zc3h12c	99	88.813	ENSODEG00000011026	ZC3H12C	100	88.724	Octodon_degus
ENSDORG00000009134	Zc3h12c	72	84.177	ENSOANG00000006242	-	99	84.177	Ornithorhynchus_anatinus
ENSDORG00000009134	Zc3h12c	100	90.774	ENSOCUG00000005283	ZC3H12C	100	90.774	Oryctolagus_cuniculus
ENSDORG00000009134	Zc3h12c	99	90.080	ENSOGAG00000013223	ZC3H12C	99	90.080	Otolemur_garnettii
ENSDORG00000009134	Zc3h12c	99	84.475	ENSOARG00000012999	ZC3H12C	97	89.572	Ovis_aries
ENSDORG00000009134	Zc3h12c	99	90.639	ENSPPAG00000041914	ZC3H12C	99	90.639	Pan_paniscus
ENSDORG00000009134	Zc3h12c	100	88.369	ENSPPRG00000006582	ZC3H12C	99	88.470	Panthera_pardus
ENSDORG00000009134	Zc3h12c	87	84.914	ENSPTIG00000009995	ZC3H12C	99	85.070	Panthera_tigris_altaica
ENSDORG00000009134	Zc3h12c	99	90.639	ENSPTRG00000050494	ZC3H12C	99	90.639	Pan_troglodytes
ENSDORG00000009134	Zc3h12c	99	90.982	ENSPANG00000023930	ZC3H12C	99	90.982	Papio_anubis
ENSDORG00000009134	Zc3h12c	97	81.713	ENSPSIG00000005959	ZC3H12C	100	82.292	Pelodiscus_sinensis
ENSDORG00000009134	Zc3h12c	91	93.763	ENSPEMG00000008502	Zc3h12c	97	93.763	Peromyscus_maniculatus_bairdii
ENSDORG00000009134	Zc3h12c	97	86.916	ENSPCIG00000022169	ZC3H12C	100	86.565	Phascolarctos_cinereus
ENSDORG00000009134	Zc3h12c	97	91.080	ENSPPYG00000003851	ZC3H12C	100	91.080	Pongo_abelii
ENSDORG00000009134	Zc3h12c	65	93.684	ENSPCAG00000015682	ZC3H12C	100	93.684	Procavia_capensis
ENSDORG00000009134	Zc3h12c	99	91.895	ENSPCOG00000024737	ZC3H12C	99	91.895	Propithecus_coquereli
ENSDORG00000009134	Zc3h12c	99	88.623	ENSPVAG00000014329	ZC3H12C	99	88.623	Pteropus_vampyrus
ENSDORG00000009134	Zc3h12c	99	90.868	ENSRNOG00000012470	Zc3h12c	99	90.868	Rattus_norvegicus
ENSDORG00000009134	Zc3h12c	99	90.525	ENSRBIG00000040441	ZC3H12C	100	90.962	Rhinopithecus_bieti
ENSDORG00000009134	Zc3h12c	99	90.525	ENSRROG00000004335	ZC3H12C	99	90.525	Rhinopithecus_roxellana
ENSDORG00000009134	Zc3h12c	99	90.982	ENSSBOG00000025582	ZC3H12C	100	91.315	Saimiri_boliviensis_boliviensis
ENSDORG00000009134	Zc3h12c	97	86.916	ENSSHAG00000005597	ZC3H12C	100	86.565	Sarcophilus_harrisii
ENSDORG00000009134	Zc3h12c	71	95.215	ENSSARG00000003433	ZC3H12C	100	95.215	Sorex_araneus
ENSDORG00000009134	Zc3h12c	99	84.091	ENSSPUG00000001832	ZC3H12C	99	83.750	Sphenodon_punctatus
ENSDORG00000009134	Zc3h12c	99	90.080	ENSSSCG00000015014	ZC3H12C	100	90.739	Sus_scrofa
ENSDORG00000009134	Zc3h12c	73	86.719	ENSTGUG00000011244	ZC3H12C	100	86.719	Taeniopygia_guttata
ENSDORG00000009134	Zc3h12c	99	90.639	ENSTTRG00000005096	ZC3H12C	100	90.639	Tursiops_truncatus
ENSDORG00000009134	Zc3h12c	99	90.741	ENSUAMG00000006051	ZC3H12C	99	90.741	Ursus_americanus
ENSDORG00000009134	Zc3h12c	99	90.525	ENSUMAG00000007283	ZC3H12C	98	90.525	Ursus_maritimus
ENSDORG00000009134	Zc3h12c	88	91.040	ENSVPAG00000003110	ZC3H12C	88	91.040	Vicugna_pacos
ENSDORG00000009134	Zc3h12c	99	70.434	ENSXETG00000033837	ZC3H12C	99	70.091	Xenopus_tropicalis