EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000009328 (Gene tree)
Gene ID: 105980503
Gene Symbol: Larp4b
Alias: D13Wsu64e|Larp5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 44876 bases
Position: chrKN672355.1:6096174-6141049
Accession: 105980503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000008766	La	PF05383.17	1.8e-14	1	1
ENSDORP00000021866	La	PF05383.17	1.9e-14	1	1
ENSDORP00000016138	La	PF05383.17	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033725	-	2199	XM_013009357	ENSDORP00000016138	732 (aa)	XP_012864811	UPI000BAD2014
ENSDORT00000031209	-	1965	-	ENSDORP00000021866	654 (aa)	-	UPI000BAD19FD
ENSDORT00000009328	-	1947	-	ENSDORP00000008766	648 (aa)	-	UPI000BAD17C6

Gene Model

Click here to download ENSDORG00000009328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000009328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000009328	Larp4b	89	46.216	ENSDORG00000004013	Larp4	93	46.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000009328	Larp4b	100	86.604	ENSG00000107929	LARP4B	100	89.474	Homo_sapiens
ENSDORG00000009328	Larp4b	87	60.169	ENSAPOG00000020531	LARP4B	100	53.289	Acanthochromis_polyacanthus
ENSDORG00000009328	Larp4b	100	85.237	ENSAMEG00000001810	LARP4B	100	83.378	Ailuropoda_melanoleuca
ENSDORG00000009328	Larp4b	86	59.240	ENSAOCG00000007887	-	76	86.986	Amphiprion_ocellaris
ENSDORG00000009328	Larp4b	93	56.653	ENSAPEG00000002512	LARP4B	98	54.580	Amphiprion_percula
ENSDORG00000009328	Larp4b	100	51.935	ENSATEG00000012614	LARP4B	100	52.566	Anabas_testudineus
ENSDORG00000009328	Larp4b	100	76.817	ENSAPLG00000003813	LARP4B	98	74.301	Anas_platyrhynchos
ENSDORG00000009328	Larp4b	100	72.667	ENSACAG00000002858	LARP4B	100	72.667	Anolis_carolinensis
ENSDORG00000009328	Larp4b	100	85.521	ENSANAG00000007531	-	100	85.521	Aotus_nancymaae
ENSDORG00000009328	Larp4b	100	54.688	ENSACLG00000026356	LARP4B	100	55.056	Astatotilapia_calliptera
ENSDORG00000009328	Larp4b	99	49.130	ENSAMXG00000003335	larp4b	93	50.640	Astyanax_mexicanus
ENSDORG00000009328	Larp4b	100	80.593	ENSBTAG00000013899	LARP4B	100	80.593	Bos_taurus
ENSDORG00000009328	Larp4b	100	85.948	ENSCJAG00000018434	LARP4B	100	85.948	Callithrix_jacchus
ENSDORG00000009328	Larp4b	100	86.292	ENSCAFG00020004209	LARP4B	100	83.919	Canis_lupus_dingo
ENSDORG00000009328	Larp4b	100	80.458	ENSCHIG00000013543	LARP4B	100	80.458	Capra_hircus
ENSDORG00000009328	Larp4b	80	88.908	ENSTSYG00000002568	LARP4B	100	88.908	Carlito_syrichta
ENSDORG00000009328	Larp4b	96	78.011	ENSCAPG00000009725	LARP4B	97	77.731	Cavia_aperea
ENSDORG00000009328	Larp4b	100	91.021	ENSCPOG00000009375	LARP4B	100	89.445	Cavia_porcellus
ENSDORG00000009328	Larp4b	100	86.357	ENSCCAG00000024869	LARP4B	100	86.357	Cebus_capucinus
ENSDORG00000009328	Larp4b	100	88.115	ENSCATG00000019750	LARP4B	100	88.115	Cercocebus_atys
ENSDORG00000009328	Larp4b	100	90.510	ENSCLAG00000011570	LARP4B	100	88.919	Chinchilla_lanigera
ENSDORG00000009328	Larp4b	66	87.903	ENSCHOG00000007831	-	66	87.903	Choloepus_hoffmanni
ENSDORG00000009328	Larp4b	100	74.000	ENSCPBG00000017063	LARP4B	100	74.000	Chrysemys_picta_bellii
ENSDORG00000009328	Larp4b	100	88.251	ENSCANG00000038021	LARP4B	100	88.251	Colobus_angolensis_palliatus
ENSDORG00000009328	Larp4b	100	89.298	ENSCGRG00001022930	Larp4b	100	89.291	Cricetulus_griseus_chok1gshd
ENSDORG00000009328	Larp4b	100	89.298	ENSCGRG00000006022	Larp4b	100	89.291	Cricetulus_griseus_crigri
ENSDORG00000009328	Larp4b	100	51.664	ENSCSEG00000007342	LARP4B	100	51.798	Cynoglossus_semilaevis
ENSDORG00000009328	Larp4b	100	52.632	ENSCVAG00000008910	LARP4B	100	53.199	Cyprinodon_variegatus
ENSDORG00000009328	Larp4b	88	55.294	ENSDARG00000062146	larp4b	91	50.725	Danio_rerio
ENSDORG00000009328	Larp4b	93	87.115	ENSDNOG00000045543	-	100	87.726	Dasypus_novemcinctus
ENSDORG00000009328	Larp4b	89	83.333	ENSETEG00000011249	LARP4B	91	83.793	Echinops_telfairi
ENSDORG00000009328	Larp4b	100	84.054	ENSEASG00005019068	-	100	84.054	Equus_asinus_asinus
ENSDORG00000009328	Larp4b	100	84.189	ENSECAG00000024040	LARP4B	100	84.189	Equus_caballus
ENSDORG00000009328	Larp4b	100	80.215	ENSEEUG00000008391	LARP4B	98	80.215	Erinaceus_europaeus
ENSDORG00000009328	Larp4b	86	45.274	ENSELUG00000001417	-	94	37.962	Esox_lucius
ENSDORG00000009328	Larp4b	100	60.500	ENSELUG00000008626	LARP4B	100	55.611	Esox_lucius
ENSDORG00000009328	Larp4b	100	85.589	ENSFCAG00000000721	-	100	82.884	Felis_catus
ENSDORG00000009328	Larp4b	100	75.779	ENSFALG00000006961	LARP4B	100	73.333	Ficedula_albicollis
ENSDORG00000009328	Larp4b	100	91.373	ENSFDAG00000006158	LARP4B	97	89.865	Fukomys_damarensis
ENSDORG00000009328	Larp4b	100	48.831	ENSFHEG00000013037	LARP4B	64	90.678	Fundulus_heteroclitus
ENSDORG00000009328	Larp4b	80	60.377	ENSGMOG00000010818	-	89	59.850	Gadus_morhua
ENSDORG00000009328	Larp4b	100	75.737	ENSGALG00000006672	LARP4B	100	73.005	Gallus_gallus
ENSDORG00000009328	Larp4b	100	55.297	ENSGACG00000017535	LARP4B	98	56.202	Gasterosteus_aculeatus
ENSDORG00000009328	Larp4b	91	75.439	ENSGAGG00000008598	LARP4B	100	75.439	Gopherus_agassizii
ENSDORG00000009328	Larp4b	100	88.251	ENSGGOG00000003572	LARP4B	100	88.251	Gorilla_gorilla
ENSDORG00000009328	Larp4b	100	53.616	ENSHBUG00000007535	LARP4B	100	54.557	Haplochromis_burtoni
ENSDORG00000009328	Larp4b	100	91.579	ENSHGLG00000012936	LARP4B	100	91.566	Heterocephalus_glaber_female
ENSDORG00000009328	Larp4b	86	76.950	ENSHGLG00100017261	-	100	74.923	Heterocephalus_glaber_male
ENSDORG00000009328	Larp4b	100	91.725	ENSHGLG00100016220	-	100	90.405	Heterocephalus_glaber_male
ENSDORG00000009328	Larp4b	99	57.349	ENSHCOG00000011581	LARP4B	89	50.897	Hippocampus_comes
ENSDORG00000009328	Larp4b	95	49.655	ENSIPUG00000009705	larp4b	97	49.517	Ictalurus_punctatus
ENSDORG00000009328	Larp4b	100	86.235	ENSSTOG00000000587	LARP4B	100	86.235	Ictidomys_tridecemlineatus
ENSDORG00000009328	Larp4b	100	88.363	ENSJJAG00000020847	Larp4b	100	88.363	Jaculus_jaculus
ENSDORG00000009328	Larp4b	100	59.898	ENSKMAG00000021674	LARP4B	100	54.000	Kryptolebias_marmoratus
ENSDORG00000009328	Larp4b	90	57.303	ENSLBEG00000025293	-	83	57.624	Labrus_bergylta
ENSDORG00000009328	Larp4b	90	67.573	ENSLACG00000009492	LARP4B	100	64.058	Latimeria_chalumnae
ENSDORG00000009328	Larp4b	100	66.038	ENSLOCG00000012290	larp4b	100	63.059	Lepisosteus_oculatus
ENSDORG00000009328	Larp4b	100	84.140	ENSLAFG00000015334	LARP4B	100	84.140	Loxodonta_africana
ENSDORG00000009328	Larp4b	100	88.115	ENSMFAG00000001766	LARP4B	100	88.115	Macaca_fascicularis
ENSDORG00000009328	Larp4b	100	88.115	ENSMMUG00000005279	LARP4B	100	88.115	Macaca_mulatta
ENSDORG00000009328	Larp4b	100	87.978	ENSMNEG00000014019	LARP4B	100	87.978	Macaca_nemestrina
ENSDORG00000009328	Larp4b	100	87.585	ENSMLEG00000035198	LARP4B	100	87.585	Mandrillus_leucophaeus
ENSDORG00000009328	Larp4b	100	58.277	ENSMAMG00000013742	LARP4B	100	53.367	Mastacembelus_armatus
ENSDORG00000009328	Larp4b	82	75.862	ENSMZEG00005006498	-	93	75.862	Maylandia_zebra
ENSDORG00000009328	Larp4b	91	54.150	ENSMZEG00005014594	-	100	55.102	Maylandia_zebra
ENSDORG00000009328	Larp4b	100	76.696	ENSMGAG00000005472	LARP4B	100	71.963	Meleagris_gallopavo
ENSDORG00000009328	Larp4b	100	89.825	ENSMAUG00000021657	Larp4b	100	89.825	Mesocricetus_auratus
ENSDORG00000009328	Larp4b	100	82.394	ENSMICG00000001301	LARP4B	100	80.379	Microcebus_murinus
ENSDORG00000009328	Larp4b	100	90.045	ENSMOCG00000021452	Larp4b	100	90.045	Microtus_ochrogaster
ENSDORG00000009328	Larp4b	85	75.862	ENSMMOG00000011253	-	93	75.862	Mola_mola
ENSDORG00000009328	Larp4b	100	75.916	ENSMODG00000005957	LARP4B	100	73.052	Monodelphis_domestica
ENSDORG00000009328	Larp4b	100	47.222	ENSMALG00000012432	LARP4B	100	48.280	Monopterus_albus
ENSDORG00000009328	Larp4b	100	90.493	MGP_CAROLIEiJ_G0018216	Larp4b	100	89.124	Mus_caroli
ENSDORG00000009328	Larp4b	100	90.175	ENSMUSG00000033499	Larp4b	100	88.855	Mus_musculus
ENSDORG00000009328	Larp4b	100	88.671	MGP_PahariEiJ_G0019266	Larp4b	100	88.671	Mus_pahari
ENSDORG00000009328	Larp4b	100	90.175	MGP_SPRETEiJ_G0019074	Larp4b	100	88.705	Mus_spretus
ENSDORG00000009328	Larp4b	100	85.062	ENSMPUG00000016220	LARP4B	97	82.568	Mustela_putorius_furo
ENSDORG00000009328	Larp4b	93	85.632	ENSMLUG00000005880	LARP4B	100	80.375	Myotis_lucifugus
ENSDORG00000009328	Larp4b	100	89.437	ENSNGAG00000001750	Larp4b	100	87.415	Nannospalax_galili
ENSDORG00000009328	Larp4b	84	75.862	ENSNBRG00000020018	LARP4B	93	75.862	Neolamprologus_brichardi
ENSDORG00000009328	Larp4b	100	86.333	ENSNLEG00000013442	LARP4B	100	86.333	Nomascus_leucogenys
ENSDORG00000009328	Larp4b	80	81.579	ENSMEUG00000013114	-	83	69.837	Notamacropus_eugenii
ENSDORG00000009328	Larp4b	98	88.596	ENSOPRG00000003300	LARP4B	100	85.523	Ochotona_princeps
ENSDORG00000009328	Larp4b	100	91.579	ENSODEG00000001109	LARP4B	100	91.579	Octodon_degus
ENSDORG00000009328	Larp4b	100	56.338	ENSONIG00000017705	LARP4B	100	56.722	Oreochromis_niloticus
ENSDORG00000009328	Larp4b	100	73.861	ENSOANG00000006100	LARP4B	100	72.655	Ornithorhynchus_anatinus
ENSDORG00000009328	Larp4b	100	87.270	ENSOCUG00000004950	LARP4B	97	87.270	Oryctolagus_cuniculus
ENSDORG00000009328	Larp4b	100	52.070	ENSORLG00000006080	LARP4B	100	52.321	Oryzias_latipes
ENSDORG00000009328	Larp4b	100	51.815	ENSORLG00020020940	LARP4B	100	51.940	Oryzias_latipes_hni
ENSDORG00000009328	Larp4b	100	52.070	ENSORLG00015020608	LARP4B	100	52.196	Oryzias_latipes_hsok
ENSDORG00000009328	Larp4b	100	50.638	ENSOMEG00000019619	LARP4B	100	51.125	Oryzias_melastigma
ENSDORG00000009328	Larp4b	93	83.556	ENSOGAG00000011540	LARP4B	100	82.133	Otolemur_garnettii
ENSDORG00000009328	Larp4b	100	80.134	ENSOARG00000015320	LARP4B	98	80.134	Ovis_aries
ENSDORG00000009328	Larp4b	100	87.842	ENSPPAG00000039232	LARP4B	100	87.842	Pan_paniscus
ENSDORG00000009328	Larp4b	100	85.413	ENSPPRG00000009489	LARP4B	100	82.973	Panthera_pardus
ENSDORG00000009328	Larp4b	100	85.237	ENSPTIG00000008543	LARP4B	100	82.838	Panthera_tigris_altaica
ENSDORG00000009328	Larp4b	100	87.842	ENSPTRG00000002235	LARP4B	100	87.842	Pan_troglodytes
ENSDORG00000009328	Larp4b	100	88.115	ENSPANG00000023546	LARP4B	100	88.115	Papio_anubis
ENSDORG00000009328	Larp4b	98	57.850	ENSPKIG00000012368	LARP4B	98	55.200	Paramormyrops_kingsleyae
ENSDORG00000009328	Larp4b	85	80.952	ENSPSIG00000005600	LARP4B	99	80.952	Pelodiscus_sinensis
ENSDORG00000009328	Larp4b	97	56.459	ENSPMGG00000008261	LARP4B	91	52.217	Periophthalmus_magnuspinnatus
ENSDORG00000009328	Larp4b	100	89.445	ENSPEMG00000014052	Larp4b	100	89.445	Peromyscus_maniculatus_bairdii
ENSDORG00000009328	Larp4b	100	56.564	ENSPFOG00000000029	LARP4B	100	52.809	Poecilia_formosa
ENSDORG00000009328	Larp4b	100	58.549	ENSPLAG00000002871	LARP4B	100	53.264	Poecilia_latipinna
ENSDORG00000009328	Larp4b	100	56.472	ENSPMEG00000016361	LARP4B	100	52.743	Poecilia_mexicana
ENSDORG00000009328	Larp4b	100	86.892	ENSPPYG00000002035	LARP4B	97	86.892	Pongo_abelii
ENSDORG00000009328	Larp4b	100	86.092	ENSPCOG00000014688	LARP4B	100	84.303	Propithecus_coquereli
ENSDORG00000009328	Larp4b	85	94.286	ENSPVAG00000009784	LARP4B	88	94.286	Pteropus_vampyrus
ENSDORG00000009328	Larp4b	100	54.057	ENSPNYG00000024252	LARP4B	100	54.931	Pundamilia_nyererei
ENSDORG00000009328	Larp4b	99	49.486	ENSPNAG00000028956	larp4b	93	51.000	Pygocentrus_nattereri
ENSDORG00000009328	Larp4b	99	90.317	ENSRNOG00000015888	Larp4b	100	89.039	Rattus_norvegicus
ENSDORG00000009328	Larp4b	100	87.842	ENSRBIG00000033294	LARP4B	100	87.842	Rhinopithecus_bieti
ENSDORG00000009328	Larp4b	100	87.432	ENSRROG00000033879	LARP4B	100	87.432	Rhinopithecus_roxellana
ENSDORG00000009328	Larp4b	100	80.435	ENSSBOG00000021109	LARP4B	100	80.435	Saimiri_boliviensis_boliviensis
ENSDORG00000009328	Larp4b	100	76.963	ENSSHAG00000013392	LARP4B	100	74.599	Sarcophilus_harrisii
ENSDORG00000009328	Larp4b	91	58.143	ENSSFOG00015003256	LARP4B	90	56.242	Scleropages_formosus
ENSDORG00000009328	Larp4b	82	79.310	ENSSMAG00000005982	-	99	79.310	Scophthalmus_maximus
ENSDORG00000009328	Larp4b	100	59.898	ENSSDUG00000006704	LARP4B	100	54.591	Seriola_dumerili
ENSDORG00000009328	Larp4b	88	75.862	ENSSLDG00000020660	LARP4B	99	75.862	Seriola_lalandi_dorsalis
ENSDORG00000009328	Larp4b	64	97.196	ENSSARG00000001243	-	79	97.196	Sorex_araneus
ENSDORG00000009328	Larp4b	100	70.755	ENSSPUG00000002102	-	100	70.755	Sphenodon_punctatus
ENSDORG00000009328	Larp4b	87	76.831	ENSSPUG00000013734	-	98	76.831	Sphenodon_punctatus
ENSDORG00000009328	Larp4b	100	58.173	ENSSPAG00000014628	LARP4B	100	58.173	Stegastes_partitus
ENSDORG00000009328	Larp4b	100	79.865	ENSSSCG00000011162	LARP4B	100	82.102	Sus_scrofa
ENSDORG00000009328	Larp4b	100	76.348	ENSTGUG00000000811	-	100	73.762	Taeniopygia_guttata
ENSDORG00000009328	Larp4b	100	54.215	ENSTNIG00000004571	-	98	54.475	Tetraodon_nigroviridis
ENSDORG00000009328	Larp4b	86	62.228	ENSTNIG00000007991	LARP4B	99	52.809	Tetraodon_nigroviridis
ENSDORG00000009328	Larp4b	90	85.772	ENSTTRG00000011151	LARP4B	90	85.772	Tursiops_truncatus
ENSDORG00000009328	Larp4b	88	84.332	ENSUAMG00000016461	LARP4B	95	84.332	Ursus_americanus
ENSDORG00000009328	Larp4b	100	86.116	ENSUMAG00000016127	LARP4B	100	83.919	Ursus_maritimus
ENSDORG00000009328	Larp4b	57	86.034	ENSVPAG00000000128	-	73	86.034	Vicugna_pacos
ENSDORG00000009328	Larp4b	100	85.940	ENSVVUG00000008641	LARP4B	100	83.649	Vulpes_vulpes
ENSDORG00000009328	Larp4b	99	70.103	ENSXETG00000016882	larp4b	100	66.534	Xenopus_tropicalis
ENSDORG00000009328	Larp4b	100	54.811	ENSXCOG00000019952	LARP4B	65	88.525	Xiphophorus_couchianus
ENSDORG00000009328	Larp4b	100	56.402	ENSXMAG00000021533	LARP4B	100	52.513	Xiphophorus_maculatus