EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000009677 (Gene tree)
Gene ID: 105996760
Gene Symbol: Zbtb48
Alias: -
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 8785 bases
Position: chrKN672352.1:3509263-3518047
Accession: 105996760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	1	6
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	2	6
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	3	6
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	4	6
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	5	6
ENSDORP00000009095	zf-C2H2	PF00096.26	1.6e-34	6	6
ENSDORP00000017079	zf-C2H2	PF00096.26	7.7e-24	1	4
ENSDORP00000017079	zf-C2H2	PF00096.26	7.7e-24	2	4
ENSDORP00000017079	zf-C2H2	PF00096.26	7.7e-24	3	4
ENSDORP00000017079	zf-C2H2	PF00096.26	7.7e-24	4	4
ENSDORP00000009095	zf-met	PF12874.7	7.7e-07	1	1
ENSDORP00000017079	zf-met	PF12874.7	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000009678	-	2193	XM_013030947	ENSDORP00000009095	685 (aa)	XP_012886401	A0A1S3GC55
ENSDORT00000023613	-	1953	-	ENSDORP00000017079	650 (aa)	-	UPI000BACF163

Gene Model

Click here to download ENSDORG00000009677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000009677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000009677	Zbtb48	53	34.717	ENSDORG00000011855	Gzf1	83	34.615
ENSDORG00000009677	Zbtb48	50	36.119	ENSDORG00000009396	Zfp354a	75	36.119
ENSDORG00000009677	Zbtb48	87	32.308	ENSDORG00000001433	Zbtb41	75	33.803
ENSDORG00000009677	Zbtb48	62	32.086	ENSDORG00000016625	Zfp661	88	37.333
ENSDORG00000009677	Zbtb48	62	40.476	ENSDORG00000010756	Zbtb34	51	40.476
ENSDORG00000009677	Zbtb48	87	44.643	ENSDORG00000026644	Zbtb14	89	44.643
ENSDORG00000009677	Zbtb48	50	33.624	ENSDORG00000023200	Zfp865	78	38.053
ENSDORG00000009677	Zbtb48	57	38.956	ENSDORG00000014484	Zfp334	71	38.956
ENSDORG00000009677	Zbtb48	50	54.348	ENSDORG00000012841	Sall4	54	46.000
ENSDORG00000009677	Zbtb48	52	30.000	ENSDORG00000009702	Zfp574	62	34.266
ENSDORG00000009677	Zbtb48	66	40.179	ENSDORG00000004536	Zbtb44	58	40.179
ENSDORG00000009677	Zbtb48	60	37.714	ENSDORG00000023529	Zfp13	72	37.931
ENSDORG00000009677	Zbtb48	62	32.967	ENSDORG00000016495	Zbtb40	52	30.841
ENSDORG00000009677	Zbtb48	53	33.333	ENSDORG00000023772	Zfp423	90	33.333
ENSDORG00000009677	Zbtb48	54	36.025	ENSDORG00000027564	Zfp26	79	41.358
ENSDORG00000009677	Zbtb48	89	39.216	ENSDORG00000006402	Zbtb26	87	39.216
ENSDORG00000009677	Zbtb48	86	38.043	ENSDORG00000023834	Patz1	79	38.043
ENSDORG00000009677	Zbtb48	86	42.683	ENSDORG00000025398	Zbtb6	93	42.683
ENSDORG00000009677	Zbtb48	88	32.669	ENSDORG00000006492	Zbtb24	72	34.661
ENSDORG00000009677	Zbtb48	62	41.228	ENSDORG00000005538	Bcl6b	90	41.228
ENSDORG00000009677	Zbtb48	65	37.391	ENSDORG00000028360	Hic2	50	37.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000009677	Zbtb48	86	72.358	ENSAPOG00000002861	zbtb48	99	72.358	Acanthochromis_polyacanthus
ENSDORG00000009677	Zbtb48	94	41.483	ENSAOCG00000008304	zbtb48	92	46.445	Amphiprion_ocellaris
ENSDORG00000009677	Zbtb48	90	50.749	ENSATEG00000024413	zbtb48	84	50.909	Anabas_testudineus
ENSDORG00000009677	Zbtb48	95	89.127	ENSCAPG00000012228	ZBTB48	100	89.127	Cavia_aperea
ENSDORG00000009677	Zbtb48	54	76.676	ENSDARG00000039263	zbtb48	89	53.226	Danio_rerio
ENSDORG00000009677	Zbtb48	59	90.394	ENSFALG00000009796	ZBTB48	90	84.598	Ficedula_albicollis
ENSDORG00000009677	Zbtb48	76	89.750	ENSGALG00000000637	ZBTB48	91	83.482	Gallus_gallus
ENSDORG00000009677	Zbtb48	90	53.407	ENSGACG00000011187	zbtb48	100	53.651	Gasterosteus_aculeatus
ENSDORG00000009677	Zbtb48	52	68.347	ENSKMAG00000002963	zbtb48	86	50.553	Kryptolebias_marmoratus
ENSDORG00000009677	Zbtb48	68	66.364	ENSLBEG00000012151	zbtb48	88	47.764	Labrus_bergylta
ENSDORG00000009677	Zbtb48	60	88.592	ENSMGAG00000001275	ZBTB48	100	88.592	Meleagris_gallopavo
ENSDORG00000009677	Zbtb48	90	51.530	ENSMMOG00000014996	zbtb48	95	51.530	Mola_mola
ENSDORG00000009677	Zbtb48	93	49.765	ENSORLG00000019331	zbtb48	97	49.385	Oryzias_latipes
ENSDORG00000009677	Zbtb48	52	67.123	ENSORLG00020007790	zbtb48	94	51.452	Oryzias_latipes_hni
ENSDORG00000009677	Zbtb48	92	42.567	ENSORLG00015002568	zbtb48	96	48.044	Oryzias_latipes_hsok
ENSDORG00000009677	Zbtb48	92	49.531	ENSOMEG00000017762	zbtb48	95	49.531	Oryzias_melastigma
ENSDORG00000009677	Zbtb48	90	48.142	ENSPMGG00000019913	zbtb48	87	46.861	Periophthalmus_magnuspinnatus
ENSDORG00000009677	Zbtb48	67	91.703	ENSPVAG00000013020	ZBTB48	100	91.703	Pteropus_vampyrus
ENSDORG00000009677	Zbtb48	90	50.528	ENSSDUG00000004449	zbtb48	83	49.775	Seriola_dumerili
ENSDORG00000009677	Zbtb48	94	51.163	ENSSLDG00000017718	zbtb48	98	51.163	Seriola_lalandi_dorsalis
ENSDORG00000009677	Zbtb48	83	82.734	ENSSPUG00000011853	ZBTB48	98	82.734	Sphenodon_punctatus
ENSDORG00000009677	Zbtb48	59	89.901	ENSTGUG00000002589	ZBTB48	88	83.705	Taeniopygia_guttata
ENSDORG00000009677	Zbtb48	91	48.936	ENSTRUG00000008615	zbtb48	89	48.946	Takifugu_rubripes
ENSDORG00000009677	Zbtb48	90	50.464	ENSTNIG00000012449	zbtb48	99	50.774	Tetraodon_nigroviridis
ENSDORG00000009677	Zbtb48	97	82.009	ENSTBEG00000014014	ZBTB48	99	82.009	Tupaia_belangeri