EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000010024 (Gene tree)
Gene ID: 105981985
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 135924 bases
Position: chrKN672360.1:12068271-12204194
Accession: 105981985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018922	Fox-1_C	PF12414.8	9.6e-43	1	1
ENSDORP00000009422	Fox-1_C	PF12414.8	1e-42	1	1
ENSDORP00000023095	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSDORP00000024018	Fox-1_C	PF12414.8	5.3e-33	1	1
ENSDORP00000018922	RRM_1	PF00076.22	2.6e-18	1	1
ENSDORP00000009422	RRM_1	PF00076.22	2.7e-18	1	1
ENSDORP00000023095	RRM_1	PF00076.22	2.8e-18	1	1
ENSDORP00000024018	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030457	-	1233	-	ENSDORP00000023095	410 (aa)	-	UPI000BAD07A8
ENSDORT00000030306	-	1167	XM_013011365	ENSDORP00000018922	388 (aa)	XP_012866819	UPI000BAD18D8
ENSDORT00000035724	-	1257	XM_013011363	ENSDORP00000024018	418 (aa)	XP_012866817	UPI000BAD2250
ENSDORT00000010024	-	1212	XM_013011364	ENSDORP00000009422	403 (aa)	XP_012866818	UPI000BAD138E

Gene Model

Click here to download ENSDORG00000010024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000010024	Rbfox1	91	51.442	ENSDORG00000005352	Rbfox3	100	53.608
ENSDORG00000010024	Rbfox1	91	59.474	ENSDORG00000015003	Rbfox2	100	58.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010024	Rbfox1	100	93.564	ENSG00000078328	RBFOX1	100	93.564	Homo_sapiens
ENSDORG00000010024	Rbfox1	100	74.224	ENSAPOG00000003197	rbfox1	98	74.693	Acanthochromis_polyacanthus
ENSDORG00000010024	Rbfox1	58	91.111	ENSAMEG00000008605	RBFOX1	89	91.556	Ailuropoda_melanoleuca
ENSDORG00000010024	Rbfox1	69	64.189	ENSACIG00000005478	rbfox1	76	60.909	Amphilophus_citrinellus
ENSDORG00000010024	Rbfox1	76	69.677	ENSAOCG00000008283	rbfox1	97	68.065	Amphiprion_ocellaris
ENSDORG00000010024	Rbfox1	94	70.341	ENSAPEG00000010636	rbfox1	100	70.079	Amphiprion_percula
ENSDORG00000010024	Rbfox1	78	67.601	ENSATEG00000007513	rbfox1	97	69.231	Anabas_testudineus
ENSDORG00000010024	Rbfox1	97	91.837	ENSAPLG00000013263	RBFOX1	97	92.092	Anas_platyrhynchos
ENSDORG00000010024	Rbfox1	98	85.139	ENSACAG00000004013	RBFOX1	99	85.139	Anolis_carolinensis
ENSDORG00000010024	Rbfox1	98	92.677	ENSANAG00000029527	RBFOX1	98	93.639	Aotus_nancymaae
ENSDORG00000010024	Rbfox1	61	81.013	ENSAMXG00000002431	rbfox1	78	70.758	Astyanax_mexicanus
ENSDORG00000010024	Rbfox1	98	92.424	ENSBTAG00000007210	RBFOX1	98	93.384	Bos_taurus
ENSDORG00000010024	Rbfox1	97	95.408	ENSCJAG00000017351	RBFOX1	93	95.663	Callithrix_jacchus
ENSDORG00000010024	Rbfox1	97	93.639	ENSCAFG00000019082	RBFOX1	93	93.893	Canis_familiaris
ENSDORG00000010024	Rbfox1	70	94.834	ENSCAFG00020024881	RBFOX1	75	95.203	Canis_lupus_dingo
ENSDORG00000010024	Rbfox1	98	92.424	ENSCHIG00000023549	RBFOX1	98	93.384	Capra_hircus
ENSDORG00000010024	Rbfox1	97	95.213	ENSTSYG00000005334	RBFOX1	100	95.213	Carlito_syrichta
ENSDORG00000010024	Rbfox1	97	95.652	ENSCAPG00000017669	RBFOX1	100	95.652	Cavia_aperea
ENSDORG00000010024	Rbfox1	100	93.317	ENSCPOG00000011314	RBFOX1	100	94.684	Cavia_porcellus
ENSDORG00000010024	Rbfox1	97	93.384	ENSCCAG00000023031	RBFOX1	93	93.639	Cebus_capucinus
ENSDORG00000010024	Rbfox1	100	93.316	ENSCATG00000033816	RBFOX1	93	93.893	Cercocebus_atys
ENSDORG00000010024	Rbfox1	99	93.781	ENSCLAG00000012761	RBFOX1	98	95.663	Chinchilla_lanigera
ENSDORG00000010024	Rbfox1	87	92.878	ENSCSAG00000008739	RBFOX1	88	94.012	Chlorocebus_sabaeus
ENSDORG00000010024	Rbfox1	74	96.923	ENSCHOG00000012843	RBFOX1	74	96.923	Choloepus_hoffmanni
ENSDORG00000010024	Rbfox1	97	92.327	ENSCPBG00000026626	RBFOX1	98	90.331	Chrysemys_picta_bellii
ENSDORG00000010024	Rbfox1	100	93.316	ENSCANG00000033125	RBFOX1	93	93.893	Colobus_angolensis_palliatus
ENSDORG00000010024	Rbfox1	100	93.052	ENSCGRG00001013729	Rbfox1	100	93.052	Cricetulus_griseus_chok1gshd
ENSDORG00000010024	Rbfox1	100	93.052	ENSCGRG00000003272	Rbfox1	100	93.052	Cricetulus_griseus_crigri
ENSDORG00000010024	Rbfox1	94	72.040	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSDORG00000010024	Rbfox1	97	79.847	ENSDARG00000014746	rbfox1	100	84.135	Danio_rerio
ENSDORG00000010024	Rbfox1	99	93.985	ENSDNOG00000043612	RBFOX1	97	92.683	Dasypus_novemcinctus
ENSDORG00000010024	Rbfox1	97	73.724	ENSETEG00000003771	RBFOX1	93	73.980	Echinops_telfairi
ENSDORG00000010024	Rbfox1	100	93.564	ENSEASG00005011599	RBFOX1	98	94.148	Equus_asinus_asinus
ENSDORG00000010024	Rbfox1	100	93.059	ENSECAG00000012667	RBFOX1	91	93.684	Equus_caballus
ENSDORG00000010024	Rbfox1	81	65.975	ENSELUG00000013096	rbfox1	98	64.835	Esox_lucius
ENSDORG00000010024	Rbfox1	100	93.069	ENSFCAG00000025322	RBFOX1	94	91.787	Felis_catus
ENSDORG00000010024	Rbfox1	84	91.411	ENSFALG00000004027	RBFOX1	97	91.718	Ficedula_albicollis
ENSDORG00000010024	Rbfox1	100	93.812	ENSFDAG00000007388	RBFOX1	100	93.812	Fukomys_damarensis
ENSDORG00000010024	Rbfox1	97	89.059	ENSGALG00000034325	RBFOX1	93	89.313	Gallus_gallus
ENSDORG00000010024	Rbfox1	94	92.632	ENSGAGG00000023681	RBFOX1	100	92.632	Gopherus_agassizii
ENSDORG00000010024	Rbfox1	100	93.316	ENSGGOG00000016871	-	100	89.604	Gorilla_gorilla
ENSDORG00000010024	Rbfox1	100	93.564	ENSHGLG00000016944	RBFOX1	100	93.564	Heterocephalus_glaber_female
ENSDORG00000010024	Rbfox1	100	93.564	ENSHGLG00100003272	RBFOX1	100	93.564	Heterocephalus_glaber_male
ENSDORG00000010024	Rbfox1	87	69.452	ENSHCOG00000016419	rbfox1	91	69.452	Hippocampus_comes
ENSDORG00000010024	Rbfox1	94	81.003	ENSIPUG00000015215	rbfox1	100	79.683	Ictalurus_punctatus
ENSDORG00000010024	Rbfox1	100	92.574	ENSSTOG00000000322	RBFOX1	100	92.695	Ictidomys_tridecemlineatus
ENSDORG00000010024	Rbfox1	100	91.067	ENSJJAG00000002575	Rbfox1	99	92.250	Jaculus_jaculus
ENSDORG00000010024	Rbfox1	97	73.232	ENSLBEG00000014659	rbfox1	98	72.980	Labrus_bergylta
ENSDORG00000010024	Rbfox1	98	84.000	ENSLOCG00000006675	rbfox1	98	85.063	Lepisosteus_oculatus
ENSDORG00000010024	Rbfox1	76	98.052	ENSLAFG00000011480	RBFOX1	100	98.052	Loxodonta_africana
ENSDORG00000010024	Rbfox1	100	93.059	ENSMFAG00000036447	RBFOX1	98	89.975	Macaca_fascicularis
ENSDORG00000010024	Rbfox1	100	93.059	ENSMMUG00000003458	RBFOX1	97	95.866	Macaca_mulatta
ENSDORG00000010024	Rbfox1	97	95.225	ENSMNEG00000032034	RBFOX1	93	95.225	Macaca_nemestrina
ENSDORG00000010024	Rbfox1	97	93.639	ENSMLEG00000015382	RBFOX1	93	93.893	Mandrillus_leucophaeus
ENSDORG00000010024	Rbfox1	94	74.490	ENSMAMG00000003142	rbfox1	100	73.724	Mastacembelus_armatus
ENSDORG00000010024	Rbfox1	74	85.017	ENSMGAG00000008606	RBFOX1	95	86.022	Meleagris_gallopavo
ENSDORG00000010024	Rbfox1	96	54.264	ENSMAUG00000020570	Rbfox1	96	55.181	Mesocricetus_auratus
ENSDORG00000010024	Rbfox1	100	93.316	ENSMICG00000034286	RBFOX1	97	89.031	Microcebus_murinus
ENSDORG00000010024	Rbfox1	100	93.052	ENSMOCG00000020932	Rbfox1	100	95.596	Microtus_ochrogaster
ENSDORG00000010024	Rbfox1	87	70.468	ENSMMOG00000009716	rbfox1	86	70.175	Mola_mola
ENSDORG00000010024	Rbfox1	83	92.236	ENSMODG00000005826	RBFOX1	90	92.236	Monodelphis_domestica
ENSDORG00000010024	Rbfox1	100	73.850	ENSMALG00000003337	rbfox1	98	75.062	Monopterus_albus
ENSDORG00000010024	Rbfox1	100	93.300	MGP_CAROLIEiJ_G0020427	Rbfox1	100	93.300	Mus_caroli
ENSDORG00000010024	Rbfox1	100	93.052	ENSMUSG00000008658	Rbfox1	99	94.430	Mus_musculus
ENSDORG00000010024	Rbfox1	100	93.300	MGP_PahariEiJ_G0016135	Rbfox1	100	93.300	Mus_pahari
ENSDORG00000010024	Rbfox1	100	92.804	MGP_SPRETEiJ_G0021321	Rbfox1	100	92.804	Mus_spretus
ENSDORG00000010024	Rbfox1	86	93.413	ENSMPUG00000014822	RBFOX1	84	93.713	Mustela_putorius_furo
ENSDORG00000010024	Rbfox1	76	98.697	ENSMLUG00000015896	RBFOX1	100	98.697	Myotis_lucifugus
ENSDORG00000010024	Rbfox1	100	93.564	ENSNGAG00000023276	Rbfox1	100	95.652	Nannospalax_galili
ENSDORG00000010024	Rbfox1	97	61.111	ENSNBRG00000011084	rbfox1	94	60.386	Neolamprologus_brichardi
ENSDORG00000010024	Rbfox1	100	93.059	ENSNLEG00000010017	-	93	93.639	Nomascus_leucogenys
ENSDORG00000010024	Rbfox1	77	96.923	ENSMEUG00000012525	RBFOX1	76	96.923	Notamacropus_eugenii
ENSDORG00000010024	Rbfox1	80	93.927	ENSOPRG00000006199	-	80	93.927	Ochotona_princeps
ENSDORG00000010024	Rbfox1	100	92.822	ENSODEG00000013166	RBFOX1	99	94.416	Octodon_degus
ENSDORG00000010024	Rbfox1	87	90.504	ENSOANG00000002379	RBFOX1	88	91.617	Ornithorhynchus_anatinus
ENSDORG00000010024	Rbfox1	60	88.362	ENSOCUG00000001205	-	99	90.749	Oryctolagus_cuniculus
ENSDORG00000010024	Rbfox1	98	95.443	ENSOGAG00000025535	RBFOX1	99	95.443	Otolemur_garnettii
ENSDORG00000010024	Rbfox1	63	82.927	ENSOARG00000005135	RBFOX1	99	81.673	Ovis_aries
ENSDORG00000010024	Rbfox1	97	95.908	ENSPPAG00000036238	-	100	95.908	Pan_paniscus
ENSDORG00000010024	Rbfox1	100	93.059	ENSPPRG00000006546	RBFOX1	93	93.639	Panthera_pardus
ENSDORG00000010024	Rbfox1	100	82.673	ENSPTIG00000021154	RBFOX1	99	83.887	Panthera_tigris_altaica
ENSDORG00000010024	Rbfox1	100	93.316	ENSPTRG00000007744	RBFOX1	100	89.604	Pan_troglodytes
ENSDORG00000010024	Rbfox1	100	93.316	ENSPANG00000026500	RBFOX1	93	93.893	Papio_anubis
ENSDORG00000010024	Rbfox1	98	81.726	ENSPKIG00000009667	-	95	82.114	Paramormyrops_kingsleyae
ENSDORG00000010024	Rbfox1	79	78.431	ENSPKIG00000019353	rbfox1	86	81.229	Paramormyrops_kingsleyae
ENSDORG00000010024	Rbfox1	98	91.392	ENSPSIG00000006523	RBFOX1	98	91.392	Pelodiscus_sinensis
ENSDORG00000010024	Rbfox1	100	93.300	ENSPEMG00000017607	Rbfox1	100	93.300	Peromyscus_maniculatus_bairdii
ENSDORG00000010024	Rbfox1	72	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSDORG00000010024	Rbfox1	86	93.713	ENSPPYG00000007079	-	84	94.012	Pongo_abelii
ENSDORG00000010024	Rbfox1	90	84.703	ENSPCAG00000002630	RBFOX1	93	84.986	Procavia_capensis
ENSDORG00000010024	Rbfox1	100	93.059	ENSPCOG00000025687	RBFOX1	93	93.639	Propithecus_coquereli
ENSDORG00000010024	Rbfox1	97	89.313	ENSPVAG00000013467	RBFOX1	93	89.567	Pteropus_vampyrus
ENSDORG00000010024	Rbfox1	94	78.697	ENSPNAG00000023109	rbfox1	100	77.444	Pygocentrus_nattereri
ENSDORG00000010024	Rbfox1	97	95.141	ENSRNOG00000002827	Rbfox1	94	95.153	Rattus_norvegicus
ENSDORG00000010024	Rbfox1	97	95.908	ENSRBIG00000044478	RBFOX1	100	95.908	Rhinopithecus_bieti
ENSDORG00000010024	Rbfox1	97	93.639	ENSRROG00000044411	RBFOX1	93	93.893	Rhinopithecus_roxellana
ENSDORG00000010024	Rbfox1	98	94.684	ENSSBOG00000033726	RBFOX1	98	94.684	Saimiri_boliviensis_boliviensis
ENSDORG00000010024	Rbfox1	97	91.049	ENSSHAG00000009257	RBFOX1	99	90.404	Sarcophilus_harrisii
ENSDORG00000010024	Rbfox1	93	68.956	ENSSFOG00015009955	-	85	68.392	Scleropages_formosus
ENSDORG00000010024	Rbfox1	84	80.198	ENSSFOG00015023675	rbfox1	97	80.198	Scleropages_formosus
ENSDORG00000010024	Rbfox1	100	74.641	ENSSMAG00000015505	rbfox1	98	72.494	Scophthalmus_maximus
ENSDORG00000010024	Rbfox1	98	72.319	ENSSDUG00000016413	rbfox1	100	71.571	Seriola_dumerili
ENSDORG00000010024	Rbfox1	87	70.554	ENSSLDG00000009353	rbfox1	95	70.122	Seriola_lalandi_dorsalis
ENSDORG00000010024	Rbfox1	87	80.175	ENSSPUG00000009732	RBFOX1	87	80.175	Sphenodon_punctatus
ENSDORG00000010024	Rbfox1	97	75.616	ENSSPAG00000009723	rbfox1	100	74.384	Stegastes_partitus
ENSDORG00000010024	Rbfox1	94	94.987	ENSSSCG00000007917	RBFOX1	91	95.251	Sus_scrofa
ENSDORG00000010024	Rbfox1	97	91.837	ENSTGUG00000004562	RBFOX1	100	92.092	Taeniopygia_guttata
ENSDORG00000010024	Rbfox1	98	75.061	ENSTRUG00000020940	rbfox1	100	74.817	Takifugu_rubripes
ENSDORG00000010024	Rbfox1	69	56.369	ENSTNIG00000002567	rbfox1	100	57.962	Tetraodon_nigroviridis
ENSDORG00000010024	Rbfox1	60	98.765	ENSTBEG00000009169	-	60	98.765	Tupaia_belangeri
ENSDORG00000010024	Rbfox1	97	93.130	ENSTTRG00000005700	RBFOX1	93	93.384	Tursiops_truncatus
ENSDORG00000010024	Rbfox1	98	89.421	ENSUAMG00000024633	RBFOX1	100	89.421	Ursus_americanus
ENSDORG00000010024	Rbfox1	96	82.902	ENSUMAG00000003579	RBFOX1	100	80.856	Ursus_maritimus
ENSDORG00000010024	Rbfox1	76	95.779	ENSVPAG00000001284	RBFOX1	74	95.779	Vicugna_pacos
ENSDORG00000010024	Rbfox1	100	93.069	ENSVVUG00000017311	RBFOX1	94	91.787	Vulpes_vulpes