EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000010144 (Gene tree)
Gene ID: 105980283
Gene Symbol: Rbm47
Alias: 9530077J19Rik
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 11628 bases
Position: chrKN672354.1:19218960-19230587
Accession: 105980283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000009536	RRM_1	PF00076.22	4.6e-38	1	3
ENSDORP00000009536	RRM_1	PF00076.22	4.6e-38	2	3
ENSDORP00000009536	RRM_1	PF00076.22	4.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000010144	-	1794	XM_013009035	ENSDORP00000009536	597 (aa)	XP_012864489	UPI000BAD0396

Gene Model

Click here to download ENSDORG00000010144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000010144	Rbm47	50	55.667	ENSDORG00000005217	Syncrip	79	46.272
ENSDORG00000010144	Rbm47	50	73.667	ENSDORG00000006405	Rbm46	64	73.667
ENSDORG00000010144	Rbm47	51	56.452	ENSDORG00000007435	Hnrnpr	71	46.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010144	Rbm47	100	93.813	ENSG00000163694	RBM47	100	96.774	Homo_sapiens
ENSDORG00000010144	Rbm47	100	77.243	ENSAPOG00000011062	rbm47	100	79.798	Acanthochromis_polyacanthus
ENSDORG00000010144	Rbm47	100	93.000	ENSAMEG00000009672	RBM47	100	93.833	Ailuropoda_melanoleuca
ENSDORG00000010144	Rbm47	100	76.246	ENSACIG00000011531	rbm47	100	75.914	Amphilophus_citrinellus
ENSDORG00000010144	Rbm47	100	77.371	ENSAOCG00000022245	rbm47	100	79.494	Amphiprion_ocellaris
ENSDORG00000010144	Rbm47	100	77.205	ENSAPEG00000018304	rbm47	100	79.494	Amphiprion_percula
ENSDORG00000010144	Rbm47	100	76.786	ENSATEG00000018400	rbm47	100	75.162	Anabas_testudineus
ENSDORG00000010144	Rbm47	100	87.458	ENSAPLG00000013974	RBM47	100	86.957	Anas_platyrhynchos
ENSDORG00000010144	Rbm47	100	85.572	ENSACAG00000011833	RBM47	100	85.240	Anolis_carolinensis
ENSDORG00000010144	Rbm47	100	94.314	ENSANAG00000029440	RBM47	100	93.980	Aotus_nancymaae
ENSDORG00000010144	Rbm47	100	76.384	ENSACLG00000016902	rbm47	100	81.330	Astatotilapia_calliptera
ENSDORG00000010144	Rbm47	100	74.797	ENSAMXG00000021794	rbm47	100	74.797	Astyanax_mexicanus
ENSDORG00000010144	Rbm47	100	95.310	ENSBTAG00000002356	RBM47	100	95.310	Bos_taurus
ENSDORG00000010144	Rbm47	100	94.157	ENSCJAG00000019385	RBM47	100	93.990	Callithrix_jacchus
ENSDORG00000010144	Rbm47	96	93.739	ENSCAFG00000015898	RBM47	100	92.821	Canis_familiaris
ENSDORG00000010144	Rbm47	83	94.556	ENSCAFG00020010558	RBM47	94	94.286	Canis_lupus_dingo
ENSDORG00000010144	Rbm47	100	95.477	ENSCHIG00000026214	RBM47	100	95.477	Capra_hircus
ENSDORG00000010144	Rbm47	90	84.553	ENSTSYG00000033612	RBM47	96	84.553	Carlito_syrichta
ENSDORG00000010144	Rbm47	100	86.957	ENSCAPG00000008426	RBM47	100	87.625	Cavia_aperea
ENSDORG00000010144	Rbm47	100	93.311	ENSCPOG00000014100	RBM47	100	93.980	Cavia_porcellus
ENSDORG00000010144	Rbm47	99	65.327	ENSCCAG00000024397	-	99	64.992	Cebus_capucinus
ENSDORG00000010144	Rbm47	100	94.324	ENSCCAG00000030129	-	100	94.491	Cebus_capucinus
ENSDORG00000010144	Rbm47	100	93.980	ENSCATG00000042064	RBM47	100	94.147	Cercocebus_atys
ENSDORG00000010144	Rbm47	100	93.144	ENSCLAG00000001684	RBM47	100	93.813	Chinchilla_lanigera
ENSDORG00000010144	Rbm47	100	93.980	ENSCSAG00000017060	RBM47	100	94.147	Chlorocebus_sabaeus
ENSDORG00000010144	Rbm47	88	91.139	ENSCHOG00000011731	RBM47	88	91.139	Choloepus_hoffmanni
ENSDORG00000010144	Rbm47	100	89.369	ENSCPBG00000013831	RBM47	100	89.369	Chrysemys_picta_bellii
ENSDORG00000010144	Rbm47	100	94.649	ENSCANG00000019997	RBM47	100	94.314	Colobus_angolensis_palliatus
ENSDORG00000010144	Rbm47	100	91.486	ENSCGRG00001000623	-	100	91.486	Cricetulus_griseus_chok1gshd
ENSDORG00000010144	Rbm47	89	87.664	ENSCGRG00001020102	-	100	70.234	Cricetulus_griseus_chok1gshd
ENSDORG00000010144	Rbm47	89	87.139	ENSCGRG00000014760	-	100	69.900	Cricetulus_griseus_crigri
ENSDORG00000010144	Rbm47	100	90.651	ENSCGRG00000007762	-	100	92.405	Cricetulus_griseus_crigri
ENSDORG00000010144	Rbm47	100	74.503	ENSCSEG00000004545	rbm47	100	74.338	Cynoglossus_semilaevis
ENSDORG00000010144	Rbm47	100	75.374	ENSCVAG00000020144	rbm47	100	79.747	Cyprinodon_variegatus
ENSDORG00000010144	Rbm47	100	75.856	ENSDARG00000061985	rbm47	100	76.183	Danio_rerio
ENSDORG00000010144	Rbm47	100	91.960	ENSDNOG00000046854	RBM47	100	92.965	Dasypus_novemcinctus
ENSDORG00000010144	Rbm47	100	94.314	ENSETEG00000009194	RBM47	100	94.314	Echinops_telfairi
ENSDORG00000010144	Rbm47	99	56.557	ENSEBUG00000011912	rbm47	91	60.323	Eptatretus_burgeri
ENSDORG00000010144	Rbm47	100	94.472	ENSEASG00005008443	RBM47	100	94.975	Equus_asinus_asinus
ENSDORG00000010144	Rbm47	100	94.472	ENSECAG00000004400	RBM47	100	94.975	Equus_caballus
ENSDORG00000010144	Rbm47	75	93.074	ENSEEUG00000001194	RBM47	75	94.372	Erinaceus_europaeus
ENSDORG00000010144	Rbm47	100	74.677	ENSELUG00000006148	rbm47	100	80.905	Esox_lucius
ENSDORG00000010144	Rbm47	100	94.975	ENSFCAG00000012399	RBM47	100	94.975	Felis_catus
ENSDORG00000010144	Rbm47	100	89.816	ENSFALG00000002861	RBM47	100	89.983	Ficedula_albicollis
ENSDORG00000010144	Rbm47	100	92.140	ENSFDAG00000016326	RBM47	100	91.973	Fukomys_damarensis
ENSDORG00000010144	Rbm47	100	76.119	ENSFHEG00000007938	rbm47	100	74.751	Fundulus_heteroclitus
ENSDORG00000010144	Rbm47	100	74.595	ENSGMOG00000014802	rbm47	100	74.595	Gadus_morhua
ENSDORG00000010144	Rbm47	63	90.237	ENSGALG00000014267	RBM47	99	90.237	Gallus_gallus
ENSDORG00000010144	Rbm47	63	81.627	ENSGAFG00000020571	rbm47	98	81.266	Gambusia_affinis
ENSDORG00000010144	Rbm47	100	73.786	ENSGACG00000016223	rbm47	100	78.734	Gasterosteus_aculeatus
ENSDORG00000010144	Rbm47	100	89.701	ENSGAGG00000020051	RBM47	100	89.701	Gopherus_agassizii
ENSDORG00000010144	Rbm47	100	93.980	ENSGGOG00000001367	RBM47	100	94.147	Gorilla_gorilla
ENSDORG00000010144	Rbm47	100	76.299	ENSHBUG00000003520	rbm47	100	81.330	Haplochromis_burtoni
ENSDORG00000010144	Rbm47	85	87.302	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSDORG00000010144	Rbm47	100	92.462	ENSHGLG00100014028	-	100	94.937	Heterocephalus_glaber_male
ENSDORG00000010144	Rbm47	100	83.082	ENSHGLG00100003071	-	100	83.082	Heterocephalus_glaber_male
ENSDORG00000010144	Rbm47	99	76.285	ENSHCOG00000002074	rbm47	99	80.253	Hippocampus_comes
ENSDORG00000010144	Rbm47	100	77.205	ENSIPUG00000004743	rbm47	100	76.539	Ictalurus_punctatus
ENSDORG00000010144	Rbm47	100	93.489	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSDORG00000010144	Rbm47	100	92.667	ENSJJAG00000013823	Rbm47	100	94.000	Jaculus_jaculus
ENSDORG00000010144	Rbm47	100	77.612	ENSKMAG00000000084	rbm47	100	80.506	Kryptolebias_marmoratus
ENSDORG00000010144	Rbm47	100	75.748	ENSLBEG00000008436	rbm47	100	78.481	Labrus_bergylta
ENSDORG00000010144	Rbm47	100	84.692	ENSLACG00000007196	RBM47	100	83.860	Latimeria_chalumnae
ENSDORG00000010144	Rbm47	100	81.364	ENSLOCG00000012966	rbm47	95	80.366	Lepisosteus_oculatus
ENSDORG00000010144	Rbm47	100	93.311	ENSLAFG00000011998	RBM47	100	93.645	Loxodonta_africana
ENSDORG00000010144	Rbm47	100	93.980	ENSMFAG00000037967	RBM47	100	94.147	Macaca_fascicularis
ENSDORG00000010144	Rbm47	100	93.980	ENSMMUG00000012036	RBM47	100	96.373	Macaca_mulatta
ENSDORG00000010144	Rbm47	100	93.980	ENSMNEG00000040774	RBM47	100	94.147	Macaca_nemestrina
ENSDORG00000010144	Rbm47	100	97.143	ENSMLEG00000041432	RBM47	100	97.143	Mandrillus_leucophaeus
ENSDORG00000010144	Rbm47	100	76.098	ENSMAMG00000019143	rbm47	100	77.670	Mastacembelus_armatus
ENSDORG00000010144	Rbm47	100	76.384	ENSMZEG00005023659	rbm47	100	76.059	Maylandia_zebra
ENSDORG00000010144	Rbm47	100	89.037	ENSMGAG00000012226	RBM47	100	88.704	Meleagris_gallopavo
ENSDORG00000010144	Rbm47	100	92.308	ENSMAUG00000006493	Rbm47	100	92.642	Mesocricetus_auratus
ENSDORG00000010144	Rbm47	100	88.945	ENSMICG00000026417	RBM47	100	89.615	Microcebus_murinus
ENSDORG00000010144	Rbm47	100	92.965	ENSMOCG00000021170	Rbm47	100	93.132	Microtus_ochrogaster
ENSDORG00000010144	Rbm47	100	76.948	ENSMMOG00000007260	rbm47	100	75.974	Mola_mola
ENSDORG00000010144	Rbm47	100	90.787	ENSMODG00000007003	RBM47	100	90.955	Monodelphis_domestica
ENSDORG00000010144	Rbm47	51	82.637	ENSMODG00000015426	-	97	82.637	Monodelphis_domestica
ENSDORG00000010144	Rbm47	100	80.402	ENSMODG00000020561	-	100	80.737	Monodelphis_domestica
ENSDORG00000010144	Rbm47	100	75.868	ENSMALG00000005167	rbm47	100	79.644	Monopterus_albus
ENSDORG00000010144	Rbm47	100	91.792	MGP_CAROLIEiJ_G0027258	Rbm47	100	92.127	Mus_caroli
ENSDORG00000010144	Rbm47	100	92.127	ENSMUSG00000070780	Rbm47	100	92.295	Mus_musculus
ENSDORG00000010144	Rbm47	100	92.127	MGP_PahariEiJ_G0017040	Rbm47	100	92.295	Mus_pahari
ENSDORG00000010144	Rbm47	100	91.792	MGP_SPRETEiJ_G0028253	Rbm47	100	91.960	Mus_spretus
ENSDORG00000010144	Rbm47	100	95.645	ENSMPUG00000006177	RBM47	94	95.645	Mustela_putorius_furo
ENSDORG00000010144	Rbm47	100	92.630	ENSMLUG00000000889	RBM47	100	92.965	Myotis_lucifugus
ENSDORG00000010144	Rbm47	100	92.642	ENSNGAG00000003325	Rbm47	100	92.977	Nannospalax_galili
ENSDORG00000010144	Rbm47	100	76.585	ENSNBRG00000015092	rbm47	100	76.260	Neolamprologus_brichardi
ENSDORG00000010144	Rbm47	100	93.645	ENSNLEG00000017151	RBM47	100	93.813	Nomascus_leucogenys
ENSDORG00000010144	Rbm47	72	86.574	ENSMEUG00000009516	-	99	86.111	Notamacropus_eugenii
ENSDORG00000010144	Rbm47	76	93.878	ENSOPRG00000016507	-	75	93.061	Ochotona_princeps
ENSDORG00000010144	Rbm47	100	92.642	ENSODEG00000004873	RBM47	100	93.478	Octodon_degus
ENSDORG00000010144	Rbm47	100	75.283	ENSONIG00000009061	rbm47	100	74.230	Oreochromis_niloticus
ENSDORG00000010144	Rbm47	100	85.762	ENSOANG00000008978	RBM47	100	87.252	Ornithorhynchus_anatinus
ENSDORG00000010144	Rbm47	100	95.151	ENSOCUG00000012034	RBM47	100	94.983	Oryctolagus_cuniculus
ENSDORG00000010144	Rbm47	100	76.080	ENSORLG00000005847	rbm47	100	80.612	Oryzias_latipes
ENSDORG00000010144	Rbm47	100	76.246	ENSORLG00020005154	rbm47	100	80.612	Oryzias_latipes_hni
ENSDORG00000010144	Rbm47	100	76.578	ENSORLG00015000066	rbm47	100	80.867	Oryzias_latipes_hsok
ENSDORG00000010144	Rbm47	100	77.741	ENSOMEG00000010730	rbm47	100	76.578	Oryzias_melastigma
ENSDORG00000010144	Rbm47	100	96.147	ENSOGAG00000029367	-	100	96.147	Otolemur_garnettii
ENSDORG00000010144	Rbm47	100	85.930	ENSOGAG00000025193	-	100	86.097	Otolemur_garnettii
ENSDORG00000010144	Rbm47	100	86.767	ENSOARG00000012711	RBM47	100	86.767	Ovis_aries
ENSDORG00000010144	Rbm47	100	93.813	ENSPPAG00000029763	RBM47	100	93.980	Pan_paniscus
ENSDORG00000010144	Rbm47	100	91.290	ENSPPRG00000012873	RBM47	100	94.459	Panthera_pardus
ENSDORG00000010144	Rbm47	85	90.748	ENSPTIG00000017046	RBM47	100	90.748	Panthera_tigris_altaica
ENSDORG00000010144	Rbm47	100	93.980	ENSPTRG00000016006	RBM47	100	94.147	Pan_troglodytes
ENSDORG00000010144	Rbm47	100	93.980	ENSPANG00000005980	RBM47	100	94.147	Papio_anubis
ENSDORG00000010144	Rbm47	100	73.134	ENSPKIG00000013431	RBM47	98	80.769	Paramormyrops_kingsleyae
ENSDORG00000010144	Rbm47	96	76.857	ENSPKIG00000005037	rbm47	100	74.548	Paramormyrops_kingsleyae
ENSDORG00000010144	Rbm47	89	90.075	ENSPSIG00000017516	RBM47	97	89.888	Pelodiscus_sinensis
ENSDORG00000010144	Rbm47	100	74.917	ENSPMGG00000018540	rbm47	100	74.917	Periophthalmus_magnuspinnatus
ENSDORG00000010144	Rbm47	100	92.642	ENSPEMG00000011088	Rbm47	100	93.144	Peromyscus_maniculatus_bairdii
ENSDORG00000010144	Rbm47	100	76.129	ENSPFOG00000007997	rbm47	100	75.081	Poecilia_formosa
ENSDORG00000010144	Rbm47	100	75.806	ENSPLAG00000002072	rbm47	100	81.003	Poecilia_latipinna
ENSDORG00000010144	Rbm47	100	78.146	ENSPMEG00000017492	rbm47	100	78.987	Poecilia_mexicana
ENSDORG00000010144	Rbm47	100	76.214	ENSPREG00000008456	rbm47	100	81.266	Poecilia_reticulata
ENSDORG00000010144	Rbm47	98	81.250	ENSPPYG00000014688	RBM47	99	80.405	Pongo_abelii
ENSDORG00000010144	Rbm47	81	93.564	ENSPCAG00000011879	RBM47	81	94.307	Procavia_capensis
ENSDORG00000010144	Rbm47	100	90.787	ENSPCOG00000023451	RBM47	100	91.457	Propithecus_coquereli
ENSDORG00000010144	Rbm47	100	94.305	ENSPVAG00000003812	RBM47	100	94.472	Pteropus_vampyrus
ENSDORG00000010144	Rbm47	100	76.337	ENSPNYG00000022868	rbm47	100	76.013	Pundamilia_nyererei
ENSDORG00000010144	Rbm47	100	75.610	ENSPNAG00000007940	rbm47	100	75.610	Pygocentrus_nattereri
ENSDORG00000010144	Rbm47	100	92.295	ENSRNOG00000002408	Rbm47	100	92.462	Rattus_norvegicus
ENSDORG00000010144	Rbm47	100	94.649	ENSRBIG00000039601	RBM47	100	94.314	Rhinopithecus_bieti
ENSDORG00000010144	Rbm47	100	94.649	ENSRROG00000044696	RBM47	100	94.314	Rhinopithecus_roxellana
ENSDORG00000010144	Rbm47	100	90.285	ENSSBOG00000028475	RBM47	100	94.057	Saimiri_boliviensis_boliviensis
ENSDORG00000010144	Rbm47	100	91.122	ENSSHAG00000017576	RBM47	100	90.955	Sarcophilus_harrisii
ENSDORG00000010144	Rbm47	100	74.793	ENSSFOG00015024101	RBM47	100	74.793	Scleropages_formosus
ENSDORG00000010144	Rbm47	100	72.459	ENSSFOG00015012445	rbm47	100	71.921	Scleropages_formosus
ENSDORG00000010144	Rbm47	100	74.230	ENSSMAG00000009744	rbm47	100	78.880	Scophthalmus_maximus
ENSDORG00000010144	Rbm47	100	77.741	ENSSDUG00000022684	rbm47	100	76.578	Seriola_dumerili
ENSDORG00000010144	Rbm47	100	77.741	ENSSLDG00000003109	rbm47	100	79.198	Seriola_lalandi_dorsalis
ENSDORG00000010144	Rbm47	84	95.536	ENSSARG00000001735	RBM47	75	95.749	Sorex_araneus
ENSDORG00000010144	Rbm47	100	86.522	ENSSPUG00000007515	RBM47	100	88.654	Sphenodon_punctatus
ENSDORG00000010144	Rbm47	100	78.239	ENSSPAG00000001257	rbm47	100	80.506	Stegastes_partitus
ENSDORG00000010144	Rbm47	100	95.142	ENSSSCG00000008796	RBM47	100	95.142	Sus_scrofa
ENSDORG00000010144	Rbm47	100	89.482	ENSTGUG00000008705	RBM47	100	89.482	Taeniopygia_guttata
ENSDORG00000010144	Rbm47	100	75.748	ENSTRUG00000014050	rbm47	100	74.917	Takifugu_rubripes
ENSDORG00000010144	Rbm47	100	75.974	ENSTNIG00000006127	rbm47	100	75.285	Tetraodon_nigroviridis
ENSDORG00000010144	Rbm47	77	88.608	ENSTBEG00000001607	RBM47	76	88.608	Tupaia_belangeri
ENSDORG00000010144	Rbm47	100	94.975	ENSTTRG00000002839	RBM47	100	94.975	Tursiops_truncatus
ENSDORG00000010144	Rbm47	100	95.142	ENSUAMG00000021346	RBM47	100	95.142	Ursus_americanus
ENSDORG00000010144	Rbm47	56	95.288	ENSVPAG00000000641	-	57	95.288	Vicugna_pacos
ENSDORG00000010144	Rbm47	96	93.565	ENSVVUG00000014774	RBM47	100	92.321	Vulpes_vulpes
ENSDORG00000010144	Rbm47	100	85.427	ENSXETG00000012802	rbm47	100	85.427	Xenopus_tropicalis
ENSDORG00000010144	Rbm47	88	81.365	ENSXCOG00000000780	rbm47	100	81.003	Xiphophorus_couchianus
ENSDORG00000010144	Rbm47	100	76.159	ENSXMAG00000009874	rbm47	100	79.241	Xiphophorus_maculatus