EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000010285 (Gene tree)
Gene ID: 105982088
Gene Symbol: Rbbp6
Alias: 4933422O15Rik|C030034J04Rik
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 34468 bases
Position: chrKN672360.1:2646510-2680977
Accession: 105982088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000019572	zf-CCHC_2	PF13696.6	3e-09	1	1
ENSDORP00000009668	zf-CCHC_2	PF13696.6	3e-09	1	1
ENSDORP00000019572	zf-CCHC	PF00098.23	0.00013	1	1
ENSDORP00000009668	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033780	-	5130	XM_013011508	ENSDORP00000019572	1709 (aa)	XP_012866962	UPI000BAD1B80
ENSDORT00000023609	-	372	-	ENSDORP00000016954	123 (aa)	-	UPI000BAD062D
ENSDORT00000010285	-	5232	XM_013011507	ENSDORP00000009668	1743 (aa)	XP_012866961	UPI000BAD1A9E

Gene Model

Click here to download ENSDORG00000010285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010285	Rbbp6	96	90.153	ENSG00000122257	RBBP6	97	100.000	Homo_sapiens
ENSDORG00000010285	Rbbp6	96	87.713	ENSAMEG00000009312	RBBP6	96	87.500	Ailuropoda_melanoleuca
ENSDORG00000010285	Rbbp6	96	89.564	ENSANAG00000037384	RBBP6	96	89.367	Aotus_nancymaae
ENSDORG00000010285	Rbbp6	96	89.223	ENSBTAG00000009441	RBBP6	63	85.323	Bos_taurus
ENSDORG00000010285	Rbbp6	96	89.669	ENSCJAG00000020661	RBBP6	96	89.412	Callithrix_jacchus
ENSDORG00000010285	Rbbp6	96	89.741	ENSCAFG00000017566	RBBP6	99	87.812	Canis_familiaris
ENSDORG00000010285	Rbbp6	96	88.987	ENSCHIG00000013732	RBBP6	64	85.057	Capra_hircus
ENSDORG00000010285	Rbbp6	95	89.598	ENSTSYG00000000822	RBBP6	96	89.425	Carlito_syrichta
ENSDORG00000010285	Rbbp6	83	85.829	ENSCAPG00000012399	RBBP6	94	84.991	Cavia_aperea
ENSDORG00000010285	Rbbp6	95	88.744	ENSCPOG00000040025	RBBP6	96	88.540	Cavia_porcellus
ENSDORG00000010285	Rbbp6	96	89.269	ENSCCAG00000023229	RBBP6	96	89.076	Cebus_capucinus
ENSDORG00000010285	Rbbp6	96	89.800	ENSCATG00000033601	RBBP6	96	89.599	Cercocebus_atys
ENSDORG00000010285	Rbbp6	95	87.101	ENSCLAG00000009872	RBBP6	96	86.926	Chinchilla_lanigera
ENSDORG00000010285	Rbbp6	96	89.741	ENSCSAG00000006609	RBBP6	96	89.541	Chlorocebus_sabaeus
ENSDORG00000010285	Rbbp6	64	95.084	ENSCHOG00000000278	RBBP6	64	95.062	Choloepus_hoffmanni
ENSDORG00000010285	Rbbp6	90	76.923	ENSCPBG00000001818	RBBP6	95	76.792	Chrysemys_picta_bellii
ENSDORG00000010285	Rbbp6	96	89.623	ENSCANG00000039613	RBBP6	96	89.425	Colobus_angolensis_palliatus
ENSDORG00000010285	Rbbp6	96	87.839	ENSCGRG00001017193	Rbbp6	96	87.565	Cricetulus_griseus_chok1gshd
ENSDORG00000010285	Rbbp6	96	87.839	ENSCGRG00000011887	Rbbp6	96	87.565	Cricetulus_griseus_crigri
ENSDORG00000010285	Rbbp6	96	88.732	ENSDNOG00000048802	RBBP6	96	88.560	Dasypus_novemcinctus
ENSDORG00000010285	Rbbp6	89	89.755	ENSEEUG00000001683	RBBP6	91	89.450	Erinaceus_europaeus
ENSDORG00000010285	Rbbp6	95	89.722	ENSFCAG00000043694	RBBP6	94	89.505	Felis_catus
ENSDORG00000010285	Rbbp6	95	89.527	ENSFDAG00000013132	RBBP6	96	89.483	Fukomys_damarensis
ENSDORG00000010285	Rbbp6	82	77.672	ENSGALG00000006043	RBBP6	81	77.186	Gallus_gallus
ENSDORG00000010285	Rbbp6	90	77.885	ENSGAGG00000004371	RBBP6	95	77.083	Gopherus_agassizii
ENSDORG00000010285	Rbbp6	96	89.858	ENSGGOG00000007137	RBBP6	96	89.657	Gorilla_gorilla
ENSDORG00000010285	Rbbp6	95	87.567	ENSHGLG00000008327	RBBP6	96	87.267	Heterocephalus_glaber_female
ENSDORG00000010285	Rbbp6	95	85.080	ENSHGLG00100007773	RBBP6	96	84.951	Heterocephalus_glaber_male
ENSDORG00000010285	Rbbp6	95	89.882	ENSSTOG00000016006	RBBP6	96	89.773	Ictidomys_tridecemlineatus
ENSDORG00000010285	Rbbp6	95	86.576	ENSJJAG00000014549	Rbbp6	96	87.209	Jaculus_jaculus
ENSDORG00000010285	Rbbp6	93	49.436	ENSLOCG00000005487	RBBP6	94	52.754	Lepisosteus_oculatus
ENSDORG00000010285	Rbbp6	96	88.371	ENSLAFG00000009528	RBBP6	96	88.205	Loxodonta_africana
ENSDORG00000010285	Rbbp6	96	89.858	ENSMFAG00000038627	RBBP6	96	89.657	Macaca_fascicularis
ENSDORG00000010285	Rbbp6	96	89.800	ENSMMUG00000015908	RBBP6	96	89.599	Macaca_mulatta
ENSDORG00000010285	Rbbp6	96	89.741	ENSMNEG00000033630	RBBP6	96	89.541	Macaca_nemestrina
ENSDORG00000010285	Rbbp6	96	89.917	ENSMLEG00000030073	RBBP6	96	89.715	Mandrillus_leucophaeus
ENSDORG00000010285	Rbbp6	95	90.124	ENSMICG00000008059	RBBP6	96	89.890	Microcebus_murinus
ENSDORG00000010285	Rbbp6	95	77.053	ENSMODG00000016318	-	96	76.812	Monodelphis_domestica
ENSDORG00000010285	Rbbp6	68	93.681	MGP_CAROLIEiJ_G0030424	-	100	94.805	Mus_caroli
ENSDORG00000010285	Rbbp6	96	86.777	ENSMUSG00000030779	Rbbp6	99	84.764	Mus_musculus
ENSDORG00000010285	Rbbp6	96	86.026	MGP_PahariEiJ_G0013634	Rbbp6	96	85.947	Mus_pahari
ENSDORG00000010285	Rbbp6	96	86.600	MGP_SPRETEiJ_G0031538	Rbbp6	96	86.403	Mus_spretus
ENSDORG00000010285	Rbbp6	96	86.903	ENSMLUG00000010601	-	96	86.818	Myotis_lucifugus
ENSDORG00000010285	Rbbp6	61	84.991	ENSNGAG00000002381	Rbbp6	64	84.854	Nannospalax_galili
ENSDORG00000010285	Rbbp6	53	96.104	ENSNLEG00000011896	RBBP6	89	94.700	Nomascus_leucogenys
ENSDORG00000010285	Rbbp6	85	80.298	ENSMEUG00000014491	RBBP6	86	80.298	Notamacropus_eugenii
ENSDORG00000010285	Rbbp6	58	99.435	ENSOPRG00000016272	RBBP6	59	99.415	Ochotona_princeps
ENSDORG00000010285	Rbbp6	95	86.528	ENSODEG00000012319	RBBP6	96	86.213	Octodon_degus
ENSDORG00000010285	Rbbp6	95	75.629	ENSOANG00000007673	RBBP6	96	75.996	Ornithorhynchus_anatinus
ENSDORG00000010285	Rbbp6	95	86.753	ENSOCUG00000004346	RBBP6	99	86.411	Oryctolagus_cuniculus
ENSDORG00000010285	Rbbp6	95	89.781	ENSOGAG00000026986	RBBP6	96	89.663	Otolemur_garnettii
ENSDORG00000010285	Rbbp6	96	87.066	ENSOARG00000017741	RBBP6	63	84.881	Ovis_aries
ENSDORG00000010285	Rbbp6	96	88.430	ENSPPAG00000023595	RBBP6	96	88.249	Pan_paniscus
ENSDORG00000010285	Rbbp6	95	89.663	ENSPPRG00000004074	RBBP6	94	89.446	Panthera_pardus
ENSDORG00000010285	Rbbp6	95	89.663	ENSPTIG00000010342	RBBP6	94	89.446	Panthera_tigris_altaica
ENSDORG00000010285	Rbbp6	96	90.094	ENSPTRG00000007897	RBBP6	96	89.890	Pan_troglodytes
ENSDORG00000010285	Rbbp6	96	89.976	ENSPANG00000019625	RBBP6	96	89.773	Papio_anubis
ENSDORG00000010285	Rbbp6	95	80.140	ENSPCIG00000014000	RBBP6	96	79.851	Phascolarctos_cinereus
ENSDORG00000010285	Rbbp6	96	89.771	ENSPPYG00000007201	RBBP6	96	89.567	Pongo_abelii
ENSDORG00000010285	Rbbp6	95	89.953	ENSPCOG00000021939	RBBP6	96	89.715	Propithecus_coquereli
ENSDORG00000010285	Rbbp6	83	90.112	ENSPVAG00000001110	RBBP6	83	90.418	Pteropus_vampyrus
ENSDORG00000010285	Rbbp6	96	86.498	ENSRNOG00000012806	Rbbp6	96	86.941	Rattus_norvegicus
ENSDORG00000010285	Rbbp6	100	90.823	ENSRBIG00000004517	RBBP6	90	88.194	Rhinopithecus_bieti
ENSDORG00000010285	Rbbp6	96	89.682	ENSRROG00000032092	RBBP6	96	89.483	Rhinopithecus_roxellana
ENSDORG00000010285	Rbbp6	96	89.847	ENSSBOG00000021666	RBBP6	96	89.645	Saimiri_boliviensis_boliviensis
ENSDORG00000010285	Rbbp6	95	80.978	ENSSHAG00000004727	-	96	80.613	Sarcophilus_harrisii
ENSDORG00000010285	Rbbp6	87	94.097	ENSSARG00000004977	RBBP6	96	84.381	Sorex_araneus
ENSDORG00000010285	Rbbp6	96	88.974	ENSSSCG00000007830	RBBP6	96	88.624	Sus_scrofa
ENSDORG00000010285	Rbbp6	95	87.847	ENSTTRG00000002696	RBBP6	94	87.750	Tursiops_truncatus
ENSDORG00000010285	Rbbp6	96	88.194	ENSUMAG00000008537	RBBP6	96	87.972	Ursus_maritimus
ENSDORG00000010285	Rbbp6	69	91.574	ENSVPAG00000006458	RBBP6	79	91.574	Vicugna_pacos
ENSDORG00000010285	Rbbp6	96	89.682	ENSVVUG00000005484	RBBP6	96	89.379	Vulpes_vulpes