EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000010461 (Gene tree)
Gene ID: 105991521
Gene Symbol: Cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 293741 bases
Position: chrKN672419.1:9775839-10069579
Accession: 105991521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000009833	CMS1	PF14617.6	4.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000010462	-	837	XM_013024173	ENSDORP00000009833	279 (aa)	XP_012879627	A0A1S3FUV9

Gene Model

Click here to download ENSDORG00000010461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010461	Cmss1	100	86.380	ENSG00000184220	CMSS1	99	90.123	Homo_sapiens
ENSDORG00000010461	Cmss1	72	64.356	ENSAPOG00000010604	cmss1	81	64.000	Acanthochromis_polyacanthus
ENSDORG00000010461	Cmss1	92	87.645	ENSAMEG00000004092	CMSS1	100	87.645	Ailuropoda_melanoleuca
ENSDORG00000010461	Cmss1	72	54.950	ENSACIG00000021854	cmss1	91	51.653	Amphilophus_citrinellus
ENSDORG00000010461	Cmss1	100	52.595	ENSAOCG00000013361	cmss1	100	52.901	Amphiprion_ocellaris
ENSDORG00000010461	Cmss1	100	52.069	ENSAPEG00000005829	cmss1	100	52.901	Amphiprion_percula
ENSDORG00000010461	Cmss1	100	53.979	ENSATEG00000008209	cmss1	100	54.110	Anabas_testudineus
ENSDORG00000010461	Cmss1	82	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSDORG00000010461	Cmss1	84	68.487	ENSACAG00000011065	CMSS1	87	68.487	Anolis_carolinensis
ENSDORG00000010461	Cmss1	100	86.071	ENSANAG00000023565	CMSS1	100	86.071	Aotus_nancymaae
ENSDORG00000010461	Cmss1	100	49.338	ENSACLG00000027294	cmss1	100	51.890	Astatotilapia_calliptera
ENSDORG00000010461	Cmss1	100	45.819	ENSAMXG00000002046	cmss1	100	47.157	Astyanax_mexicanus
ENSDORG00000010461	Cmss1	100	86.380	ENSBTAG00000013663	CMSS1	100	86.380	Bos_taurus
ENSDORG00000010461	Cmss1	100	86.786	ENSCJAG00000000610	CMSS1	100	86.786	Callithrix_jacchus
ENSDORG00000010461	Cmss1	92	88.760	ENSCAFG00000009230	CMSS1	93	88.760	Canis_familiaris
ENSDORG00000010461	Cmss1	93	88.417	ENSCAFG00020009464	-	95	88.417	Canis_lupus_dingo
ENSDORG00000010461	Cmss1	83	84.052	ENSCAFG00020024156	-	72	84.052	Canis_lupus_dingo
ENSDORG00000010461	Cmss1	92	85.938	ENSCHIG00000013003	CMSS1	93	85.938	Capra_hircus
ENSDORG00000010461	Cmss1	92	86.434	ENSTSYG00000009266	CMSS1	99	86.434	Carlito_syrichta
ENSDORG00000010461	Cmss1	80	71.179	ENSCAPG00000013584	CMSS1	100	71.616	Cavia_aperea
ENSDORG00000010461	Cmss1	100	85.663	ENSCPOG00000014680	CMSS1	100	85.663	Cavia_porcellus
ENSDORG00000010461	Cmss1	100	87.857	ENSCCAG00000034685	CMSS1	100	87.857	Cebus_capucinus
ENSDORG00000010461	Cmss1	100	86.738	ENSCATG00000031980	CMSS1	100	86.738	Cercocebus_atys
ENSDORG00000010461	Cmss1	82	91.703	ENSCLAG00000011241	CMSS1	98	91.703	Chinchilla_lanigera
ENSDORG00000010461	Cmss1	88	89.388	ENSCSAG00000006024	CMSS1	100	89.388	Chlorocebus_sabaeus
ENSDORG00000010461	Cmss1	100	67.025	ENSCHOG00000012098	CMSS1	100	67.025	Choloepus_hoffmanni
ENSDORG00000010461	Cmss1	67	41.361	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSDORG00000010461	Cmss1	100	86.380	ENSCANG00000031337	CMSS1	100	86.380	Colobus_angolensis_palliatus
ENSDORG00000010461	Cmss1	100	81.004	ENSCGRG00001014305	Cmss1	100	81.004	Cricetulus_griseus_chok1gshd
ENSDORG00000010461	Cmss1	92	81.250	ENSCGRG00000006722	Cmss1	99	81.250	Cricetulus_griseus_crigri
ENSDORG00000010461	Cmss1	100	52.721	ENSCSEG00000004958	cmss1	100	52.721	Cynoglossus_semilaevis
ENSDORG00000010461	Cmss1	100	52.249	ENSCVAG00000005039	cmss1	100	54.110	Cyprinodon_variegatus
ENSDORG00000010461	Cmss1	100	47.333	ENSDARG00000112579	cmss1	100	47.279	Danio_rerio
ENSDORG00000010461	Cmss1	94	82.443	ENSDNOG00000040418	CMSS1	92	83.012	Dasypus_novemcinctus
ENSDORG00000010461	Cmss1	96	81.041	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSDORG00000010461	Cmss1	95	85.714	ENSECAG00000015662	CMSS1	99	89.823	Equus_caballus
ENSDORG00000010461	Cmss1	100	56.631	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSDORG00000010461	Cmss1	100	50.000	ENSELUG00000019459	cmss1	100	50.667	Esox_lucius
ENSDORG00000010461	Cmss1	100	91.756	ENSFCAG00000044577	CMSS1	100	91.756	Felis_catus
ENSDORG00000010461	Cmss1	86	64.017	ENSFALG00000005816	CMSS1	100	64.017	Ficedula_albicollis
ENSDORG00000010461	Cmss1	82	89.035	ENSFDAG00000012577	CMSS1	100	89.035	Fukomys_damarensis
ENSDORG00000010461	Cmss1	81	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSDORG00000010461	Cmss1	99	51.864	ENSGMOG00000016729	cmss1	100	53.521	Gadus_morhua
ENSDORG00000010461	Cmss1	85	68.220	ENSGALG00000015267	CMSS1	90	68.220	Gallus_gallus
ENSDORG00000010461	Cmss1	74	63.285	ENSGAFG00000021217	cmss1	76	63.000	Gambusia_affinis
ENSDORG00000010461	Cmss1	99	48.763	ENSGACG00000002798	cmss1	100	49.104	Gasterosteus_aculeatus
ENSDORG00000010461	Cmss1	85	71.730	ENSGAGG00000019861	CMSS1	92	71.730	Gopherus_agassizii
ENSDORG00000010461	Cmss1	92	87.597	ENSGGOG00000014125	CMSS1	99	87.597	Gorilla_gorilla
ENSDORG00000010461	Cmss1	100	49.169	ENSHBUG00000008431	cmss1	100	51.034	Haplochromis_burtoni
ENSDORG00000010461	Cmss1	91	84.980	ENSHGLG00000019481	CMSS1	99	85.600	Heterocephalus_glaber_female
ENSDORG00000010461	Cmss1	92	84.766	ENSHGLG00100010314	CMSS1	99	84.766	Heterocephalus_glaber_male
ENSDORG00000010461	Cmss1	100	55.593	ENSHCOG00000003222	cmss1	100	55.932	Hippocampus_comes
ENSDORG00000010461	Cmss1	100	48.276	ENSIPUG00000011591	cmss1	100	49.655	Ictalurus_punctatus
ENSDORG00000010461	Cmss1	100	88.530	ENSSTOG00000019366	CMSS1	100	88.530	Ictidomys_tridecemlineatus
ENSDORG00000010461	Cmss1	100	81.720	ENSJJAG00000014894	Cmss1	100	81.720	Jaculus_jaculus
ENSDORG00000010461	Cmss1	72	54.950	ENSKMAG00000002390	cmss1	80	54.500	Kryptolebias_marmoratus
ENSDORG00000010461	Cmss1	72	58.128	ENSLBEG00000006298	cmss1	82	57.711	Labrus_bergylta
ENSDORG00000010461	Cmss1	82	65.217	ENSLACG00000009293	CMSS1	100	65.217	Latimeria_chalumnae
ENSDORG00000010461	Cmss1	100	52.465	ENSLOCG00000009391	cmss1	100	53.169	Lepisosteus_oculatus
ENSDORG00000010461	Cmss1	82	88.158	ENSLAFG00000017509	CMSS1	100	88.158	Loxodonta_africana
ENSDORG00000010461	Cmss1	100	87.455	ENSMFAG00000045006	CMSS1	100	87.455	Macaca_fascicularis
ENSDORG00000010461	Cmss1	100	87.097	ENSMMUG00000002939	CMSS1	98	90.455	Macaca_mulatta
ENSDORG00000010461	Cmss1	100	87.097	ENSMNEG00000031315	CMSS1	100	87.097	Macaca_nemestrina
ENSDORG00000010461	Cmss1	100	86.738	ENSMLEG00000033660	CMSS1	100	86.738	Mandrillus_leucophaeus
ENSDORG00000010461	Cmss1	100	52.381	ENSMAMG00000017176	cmss1	100	53.425	Mastacembelus_armatus
ENSDORG00000010461	Cmss1	100	49.338	ENSMZEG00005021886	cmss1	100	51.890	Maylandia_zebra
ENSDORG00000010461	Cmss1	82	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSDORG00000010461	Cmss1	100	61.071	ENSMAUG00000020609	Cmss1	100	61.071	Mesocricetus_auratus
ENSDORG00000010461	Cmss1	100	87.455	ENSMICG00000048977	CMSS1	100	87.455	Microcebus_murinus
ENSDORG00000010461	Cmss1	100	81.720	ENSMOCG00000021937	Cmss1	100	81.720	Microtus_ochrogaster
ENSDORG00000010461	Cmss1	72	61.386	ENSMMOG00000019794	cmss1	83	61.000	Mola_mola
ENSDORG00000010461	Cmss1	92	77.308	ENSMODG00000002275	CMSS1	97	77.308	Monodelphis_domestica
ENSDORG00000010461	Cmss1	100	51.505	ENSMALG00000004250	cmss1	100	52.218	Monopterus_albus
ENSDORG00000010461	Cmss1	100	82.500	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.500	Mus_caroli
ENSDORG00000010461	Cmss1	100	83.214	ENSMUSG00000022748	Cmss1	100	83.214	Mus_musculus
ENSDORG00000010461	Cmss1	100	81.786	MGP_PahariEiJ_G0016524	Cmss1	100	81.786	Mus_pahari
ENSDORG00000010461	Cmss1	100	82.500	MGP_SPRETEiJ_G0021724	Cmss1	100	82.500	Mus_spretus
ENSDORG00000010461	Cmss1	87	93.033	ENSMPUG00000011324	CMSS1	99	90.272	Mustela_putorius_furo
ENSDORG00000010461	Cmss1	92	88.462	ENSMLUG00000001131	CMSS1	99	88.462	Myotis_lucifugus
ENSDORG00000010461	Cmss1	100	83.871	ENSNGAG00000020316	Cmss1	100	83.871	Nannospalax_galili
ENSDORG00000010461	Cmss1	100	50.680	ENSNBRG00000003095	cmss1	100	51.890	Neolamprologus_brichardi
ENSDORG00000010461	Cmss1	100	88.530	ENSNLEG00000034172	CMSS1	100	88.530	Nomascus_leucogenys
ENSDORG00000010461	Cmss1	82	67.982	ENSMEUG00000014505	CMSS1	100	67.982	Notamacropus_eugenii
ENSDORG00000010461	Cmss1	100	87.814	ENSOPRG00000002986	CMSS1	100	87.814	Ochotona_princeps
ENSDORG00000010461	Cmss1	100	74.194	ENSODEG00000001853	-	100	74.194	Octodon_degus
ENSDORG00000010461	Cmss1	100	84.588	ENSODEG00000005226	-	100	84.588	Octodon_degus
ENSDORG00000010461	Cmss1	100	79.715	ENSODEG00000003558	-	100	79.715	Octodon_degus
ENSDORG00000010461	Cmss1	100	69.534	ENSODEG00000009446	-	100	69.534	Octodon_degus
ENSDORG00000010461	Cmss1	72	61.386	ENSONIG00000006678	cmss1	93	55.372	Oreochromis_niloticus
ENSDORG00000010461	Cmss1	91	70.751	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSDORG00000010461	Cmss1	92	87.984	ENSOCUG00000025366	CMSS1	93	87.984	Oryctolagus_cuniculus
ENSDORG00000010461	Cmss1	100	55.088	ENSORLG00000020340	cmss1	100	54.704	Oryzias_latipes
ENSDORG00000010461	Cmss1	76	55.450	ENSORLG00020012235	cmss1	85	56.000	Oryzias_latipes_hni
ENSDORG00000010461	Cmss1	72	55.941	ENSORLG00015015551	cmss1	75	55.500	Oryzias_latipes_hsok
ENSDORG00000010461	Cmss1	100	54.483	ENSOMEG00000012555	cmss1	100	54.671	Oryzias_melastigma
ENSDORG00000010461	Cmss1	82	89.912	ENSOGAG00000002045	CMSS1	100	89.912	Otolemur_garnettii
ENSDORG00000010461	Cmss1	96	84.015	ENSOARG00000017899	CMSS1	90	84.015	Ovis_aries
ENSDORG00000010461	Cmss1	92	87.597	ENSPPAG00000038515	CMSS1	95	87.597	Pan_paniscus
ENSDORG00000010461	Cmss1	100	91.756	ENSPPRG00000016767	CMSS1	100	91.756	Panthera_pardus
ENSDORG00000010461	Cmss1	100	91.039	ENSPTIG00000018274	CMSS1	100	91.039	Panthera_tigris_altaica
ENSDORG00000010461	Cmss1	100	86.738	ENSPTRG00000015157	CMSS1	100	88.980	Pan_troglodytes
ENSDORG00000010461	Cmss1	92	84.109	ENSPANG00000019980	CMSS1	99	84.109	Papio_anubis
ENSDORG00000010461	Cmss1	91	56.716	ENSPKIG00000012609	cmss1	97	56.757	Paramormyrops_kingsleyae
ENSDORG00000010461	Cmss1	82	73.799	ENSPSIG00000003849	CMSS1	100	73.799	Pelodiscus_sinensis
ENSDORG00000010461	Cmss1	72	62.069	ENSPMGG00000010286	cmss1	86	61.692	Periophthalmus_magnuspinnatus
ENSDORG00000010461	Cmss1	100	82.500	ENSPEMG00000016384	Cmss1	100	82.500	Peromyscus_maniculatus_bairdii
ENSDORG00000010461	Cmss1	73	52.451	ENSPMAG00000001146	cmss1	98	52.500	Petromyzon_marinus
ENSDORG00000010461	Cmss1	92	75.096	ENSPCIG00000015656	CMSS1	99	75.573	Phascolarctos_cinereus
ENSDORG00000010461	Cmss1	100	52.962	ENSPFOG00000016849	cmss1	100	53.147	Poecilia_formosa
ENSDORG00000010461	Cmss1	100	52.613	ENSPLAG00000008323	cmss1	100	52.797	Poecilia_latipinna
ENSDORG00000010461	Cmss1	100	53.287	ENSPMEG00000021020	cmss1	100	53.819	Poecilia_mexicana
ENSDORG00000010461	Cmss1	83	58.228	ENSPREG00000007618	cmss1	68	62.000	Poecilia_reticulata
ENSDORG00000010461	Cmss1	100	86.738	ENSPPYG00000013606	CMSS1	100	86.738	Pongo_abelii
ENSDORG00000010461	Cmss1	100	87.814	ENSPCOG00000020035	CMSS1	100	87.814	Propithecus_coquereli
ENSDORG00000010461	Cmss1	100	78.495	ENSPVAG00000017031	CMSS1	100	78.495	Pteropus_vampyrus
ENSDORG00000010461	Cmss1	91	49.275	ENSPNYG00000013428	cmss1	97	52.075	Pundamilia_nyererei
ENSDORG00000010461	Cmss1	100	48.322	ENSPNAG00000007912	cmss1	100	49.664	Pygocentrus_nattereri
ENSDORG00000010461	Cmss1	92	81.467	ENSRNOG00000027888	Cmss1	99	81.467	Rattus_norvegicus
ENSDORG00000010461	Cmss1	100	86.380	ENSRBIG00000037931	CMSS1	100	86.380	Rhinopithecus_bieti
ENSDORG00000010461	Cmss1	100	86.380	ENSRROG00000042910	CMSS1	100	86.380	Rhinopithecus_roxellana
ENSDORG00000010461	Cmss1	100	81.429	ENSSBOG00000030980	CMSS1	99	86.873	Saimiri_boliviensis_boliviensis
ENSDORG00000010461	Cmss1	89	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSDORG00000010461	Cmss1	100	54.027	ENSSFOG00015001509	cmss1	100	55.517	Scleropages_formosus
ENSDORG00000010461	Cmss1	100	56.271	ENSSMAG00000001653	cmss1	100	55.782	Scophthalmus_maximus
ENSDORG00000010461	Cmss1	100	53.265	ENSSDUG00000007719	cmss1	100	54.795	Seriola_dumerili
ENSDORG00000010461	Cmss1	74	63.768	ENSSLDG00000012300	cmss1	99	50.000	Seriola_lalandi_dorsalis
ENSDORG00000010461	Cmss1	100	71.429	ENSSARG00000003584	CMSS1	100	71.429	Sorex_araneus
ENSDORG00000010461	Cmss1	81	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSDORG00000010461	Cmss1	74	64.563	ENSSPAG00000019182	cmss1	62	64.500	Stegastes_partitus
ENSDORG00000010461	Cmss1	100	91.039	ENSSSCG00000011970	CMSS1	100	91.039	Sus_scrofa
ENSDORG00000010461	Cmss1	82	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSDORG00000010461	Cmss1	100	50.340	ENSTRUG00000015265	cmss1	100	51.408	Takifugu_rubripes
ENSDORG00000010461	Cmss1	72	55.941	ENSTNIG00000002880	cmss1	72	55.500	Tetraodon_nigroviridis
ENSDORG00000010461	Cmss1	100	61.071	ENSTBEG00000016722	CMSS1	100	61.071	Tupaia_belangeri
ENSDORG00000010461	Cmss1	100	86.380	ENSTTRG00000001562	CMSS1	100	86.380	Tursiops_truncatus
ENSDORG00000010461	Cmss1	97	86.131	ENSUAMG00000024209	CMSS1	100	92.825	Ursus_americanus
ENSDORG00000010461	Cmss1	93	88.417	ENSUMAG00000001983	CMSS1	99	88.672	Ursus_maritimus
ENSDORG00000010461	Cmss1	100	68.459	ENSVPAG00000000263	CMSS1	100	68.459	Vicugna_pacos
ENSDORG00000010461	Cmss1	78	91.244	ENSVVUG00000007776	-	85	91.244	Vulpes_vulpes
ENSDORG00000010461	Cmss1	88	90.650	ENSVVUG00000021647	-	100	90.650	Vulpes_vulpes
ENSDORG00000010461	Cmss1	100	56.338	ENSXETG00000011858	cmss1	100	56.338	Xenopus_tropicalis
ENSDORG00000010461	Cmss1	75	62.500	ENSXCOG00000018724	cmss1	68	62.500	Xiphophorus_couchianus
ENSDORG00000010461	Cmss1	75	62.500	ENSXMAG00000011243	cmss1	75	62.500	Xiphophorus_maculatus