EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000010468 (Gene tree)
Gene ID: 105986875
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 190494 bases
Position: chrKN672383.1:6138283-6328776
Accession: 105986875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000009843	S1	PF00575.23	5.8e-09	1	1
ENSDORP00000024497	S1	PF00575.23	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000010472	-	2943	XM_013017994	ENSDORP00000009843	980 (aa)	XP_012873448	UPI000BAD146F
ENSDORT00000029459	-	2997	-	ENSDORP00000024497	998 (aa)	-	UPI000BAD21E5

Gene Model

Click here to download ENSDORG00000010468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010468	Srbd1	100	85.930	ENSG00000068784	SRBD1	100	85.930	Homo_sapiens
ENSDORG00000010468	Srbd1	100	51.378	ENSAPOG00000005103	si:ch211-117n7.8	99	51.572	Acanthochromis_polyacanthus
ENSDORG00000010468	Srbd1	100	87.626	ENSAMEG00000005993	SRBD1	100	87.626	Ailuropoda_melanoleuca
ENSDORG00000010468	Srbd1	83	57.706	ENSACIG00000009875	si:ch211-117n7.8	85	57.770	Amphilophus_citrinellus
ENSDORG00000010468	Srbd1	99	51.881	ENSAOCG00000024718	si:ch211-117n7.8	99	52.028	Amphiprion_ocellaris
ENSDORG00000010468	Srbd1	97	53.354	ENSAPEG00000002645	si:ch211-117n7.8	99	53.354	Amphiprion_percula
ENSDORG00000010468	Srbd1	84	57.926	ENSATEG00000010844	si:ch211-117n7.8	98	52.457	Anabas_testudineus
ENSDORG00000010468	Srbd1	100	70.341	ENSAPLG00000006313	SRBD1	100	70.341	Anas_platyrhynchos
ENSDORG00000010468	Srbd1	100	86.030	ENSANAG00000025573	SRBD1	100	86.030	Aotus_nancymaae
ENSDORG00000010468	Srbd1	84	57.720	ENSACLG00000024219	si:ch211-117n7.8	99	51.315	Astatotilapia_calliptera
ENSDORG00000010468	Srbd1	90	58.804	ENSAMXG00000004294	SRBD1	92	56.408	Astyanax_mexicanus
ENSDORG00000010468	Srbd1	100	86.834	ENSBTAG00000007508	SRBD1	97	86.834	Bos_taurus
ENSDORG00000010468	Srbd1	100	85.427	ENSCJAG00000000727	SRBD1	100	85.427	Callithrix_jacchus
ENSDORG00000010468	Srbd1	100	87.262	ENSCAFG00000002554	SRBD1	100	87.262	Canis_familiaris
ENSDORG00000010468	Srbd1	100	84.739	ENSCAFG00020026284	SRBD1	99	89.449	Canis_lupus_dingo
ENSDORG00000010468	Srbd1	100	86.734	ENSCHIG00000016535	SRBD1	98	86.734	Capra_hircus
ENSDORG00000010468	Srbd1	100	86.774	ENSTSYG00000012797	SRBD1	100	86.874	Carlito_syrichta
ENSDORG00000010468	Srbd1	100	87.576	ENSCPOG00000004773	SRBD1	100	87.576	Cavia_porcellus
ENSDORG00000010468	Srbd1	100	86.332	ENSCCAG00000025589	SRBD1	100	86.332	Cebus_capucinus
ENSDORG00000010468	Srbd1	100	86.834	ENSCATG00000039530	SRBD1	100	86.834	Cercocebus_atys
ENSDORG00000010468	Srbd1	100	87.919	ENSCLAG00000008623	SRBD1	100	87.919	Chinchilla_lanigera
ENSDORG00000010468	Srbd1	100	86.935	ENSCSAG00000013350	SRBD1	100	86.935	Chlorocebus_sabaeus
ENSDORG00000010468	Srbd1	87	92.157	ENSCHOG00000003805	SRBD1	87	92.157	Choloepus_hoffmanni
ENSDORG00000010468	Srbd1	100	71.759	ENSCPBG00000005677	SRBD1	100	71.960	Chrysemys_picta_bellii
ENSDORG00000010468	Srbd1	79	42.038	ENSCING00000005950	-	99	42.038	Ciona_intestinalis
ENSDORG00000010468	Srbd1	80	43.511	ENSCSAVG00000000861	-	99	43.511	Ciona_savignyi
ENSDORG00000010468	Srbd1	99	86.606	ENSCANG00000016307	SRBD1	99	86.606	Colobus_angolensis_palliatus
ENSDORG00000010468	Srbd1	100	84.467	ENSCGRG00001000513	Srbd1	100	84.467	Cricetulus_griseus_chok1gshd
ENSDORG00000010468	Srbd1	100	84.467	ENSCGRG00000002283	Srbd1	100	84.467	Cricetulus_griseus_crigri
ENSDORG00000010468	Srbd1	100	51.083	ENSCSEG00000000856	si:ch211-117n7.8	99	51.181	Cynoglossus_semilaevis
ENSDORG00000010468	Srbd1	84	57.432	ENSCVAG00000020212	si:ch211-117n7.8	89	57.432	Cyprinodon_variegatus
ENSDORG00000010468	Srbd1	100	86.486	ENSDNOG00000018686	SRBD1	100	86.486	Dasypus_novemcinctus
ENSDORG00000010468	Srbd1	94	33.770	FBgn0051156	CG31156	98	33.972	Drosophila_melanogaster
ENSDORG00000010468	Srbd1	89	82.971	ENSETEG00000000739	SRBD1	92	82.971	Echinops_telfairi
ENSDORG00000010468	Srbd1	74	47.510	ENSEBUG00000008902	si:ch211-117n7.8	98	47.510	Eptatretus_burgeri
ENSDORG00000010468	Srbd1	100	84.739	ENSEASG00005003132	SRBD1	97	91.083	Equus_asinus_asinus
ENSDORG00000010468	Srbd1	100	87.751	ENSECAG00000013865	SRBD1	98	87.751	Equus_caballus
ENSDORG00000010468	Srbd1	90	57.623	ENSELUG00000012592	si:ch211-117n7.8	86	57.623	Esox_lucius
ENSDORG00000010468	Srbd1	100	88.253	ENSFCAG00000005101	SRBD1	100	88.253	Felis_catus
ENSDORG00000010468	Srbd1	100	68.502	ENSFALG00000012966	SRBD1	100	68.432	Ficedula_albicollis
ENSDORG00000010468	Srbd1	98	87.161	ENSFDAG00000016670	SRBD1	99	87.161	Fukomys_damarensis
ENSDORG00000010468	Srbd1	86	57.809	ENSFHEG00000019480	si:ch211-117n7.8	84	57.809	Fundulus_heteroclitus
ENSDORG00000010468	Srbd1	50	52.740	ENSGMOG00000018010	-	100	52.740	Gadus_morhua
ENSDORG00000010468	Srbd1	100	69.920	ENSGALG00000009990	SRBD1	100	69.950	Gallus_gallus
ENSDORG00000010468	Srbd1	85	56.345	ENSGAFG00000019664	si:ch211-117n7.8	99	48.974	Gambusia_affinis
ENSDORG00000010468	Srbd1	62	59.840	ENSGACG00000010794	si:ch211-117n7.8	100	59.840	Gasterosteus_aculeatus
ENSDORG00000010468	Srbd1	84	79.232	ENSGAGG00000006166	SRBD1	99	79.232	Gopherus_agassizii
ENSDORG00000010468	Srbd1	97	86.584	ENSGGOG00000005910	SRBD1	99	86.584	Gorilla_gorilla
ENSDORG00000010468	Srbd1	84	50.907	ENSHBUG00000013207	si:ch211-117n7.8	99	46.660	Haplochromis_burtoni
ENSDORG00000010468	Srbd1	99	88.571	ENSHGLG00000018153	-	99	88.571	Heterocephalus_glaber_female
ENSDORG00000010468	Srbd1	99	88.367	ENSHGLG00100015183	-	99	88.367	Heterocephalus_glaber_male
ENSDORG00000010468	Srbd1	85	61.356	ENSIPUG00000009661	srbd1	85	61.356	Ictalurus_punctatus
ENSDORG00000010468	Srbd1	100	89.206	ENSSTOG00000005898	SRBD1	100	89.206	Ictidomys_tridecemlineatus
ENSDORG00000010468	Srbd1	100	80.488	ENSJJAG00000022244	Srbd1	100	80.488	Jaculus_jaculus
ENSDORG00000010468	Srbd1	100	50.433	ENSKMAG00000003473	si:ch211-117n7.8	99	51.429	Kryptolebias_marmoratus
ENSDORG00000010468	Srbd1	98	51.476	ENSLBEG00000027518	si:ch211-117n7.8	98	51.476	Labrus_bergylta
ENSDORG00000010468	Srbd1	85	69.668	ENSLACG00000009790	SRBD1	99	69.668	Latimeria_chalumnae
ENSDORG00000010468	Srbd1	96	59.326	ENSLOCG00000016360	si:ch211-117n7.8	99	57.555	Lepisosteus_oculatus
ENSDORG00000010468	Srbd1	100	87.035	ENSMFAG00000042026	SRBD1	100	87.035	Macaca_fascicularis
ENSDORG00000010468	Srbd1	100	86.935	ENSMMUG00000003490	SRBD1	100	86.935	Macaca_mulatta
ENSDORG00000010468	Srbd1	100	84.623	ENSMNEG00000034701	SRBD1	100	84.623	Macaca_nemestrina
ENSDORG00000010468	Srbd1	100	86.633	ENSMLEG00000000745	SRBD1	100	86.633	Mandrillus_leucophaeus
ENSDORG00000010468	Srbd1	82	56.280	ENSMAMG00000021921	si:ch211-117n7.8	99	50.598	Mastacembelus_armatus
ENSDORG00000010468	Srbd1	84	57.720	ENSMZEG00005027369	si:ch211-117n7.8	99	51.315	Maylandia_zebra
ENSDORG00000010468	Srbd1	80	75.188	ENSMGAG00000010273	SRBD1	100	75.188	Meleagris_gallopavo
ENSDORG00000010468	Srbd1	82	84.606	ENSMAUG00000013916	Srbd1	99	84.569	Mesocricetus_auratus
ENSDORG00000010468	Srbd1	100	87.538	ENSMICG00000007835	SRBD1	100	87.538	Microcebus_murinus
ENSDORG00000010468	Srbd1	100	84.162	ENSMOCG00000018716	Srbd1	100	84.162	Microtus_ochrogaster
ENSDORG00000010468	Srbd1	86	55.981	ENSMMOG00000007507	si:ch211-117n7.8	89	55.981	Mola_mola
ENSDORG00000010468	Srbd1	96	53.132	ENSMALG00000001562	si:ch211-117n7.8	92	53.236	Monopterus_albus
ENSDORG00000010468	Srbd1	100	82.114	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.948	Mus_caroli
ENSDORG00000010468	Srbd1	100	81.809	ENSMUSG00000024135	Srbd1	100	81.809	Mus_musculus
ENSDORG00000010468	Srbd1	100	80.691	MGP_PahariEiJ_G0020924	Srbd1	100	80.691	Mus_pahari
ENSDORG00000010468	Srbd1	100	82.012	MGP_SPRETEiJ_G0022850	Srbd1	100	82.012	Mus_spretus
ENSDORG00000010468	Srbd1	100	84.137	ENSMLUG00000007039	SRBD1	100	84.137	Myotis_lucifugus
ENSDORG00000010468	Srbd1	100	82.708	ENSNGAG00000011893	Srbd1	100	82.708	Nannospalax_galili
ENSDORG00000010468	Srbd1	84	56.197	ENSNBRG00000012873	si:ch211-117n7.8	99	50.660	Neolamprologus_brichardi
ENSDORG00000010468	Srbd1	100	86.332	ENSNLEG00000016877	SRBD1	100	86.332	Nomascus_leucogenys
ENSDORG00000010468	Srbd1	100	85.031	ENSODEG00000012095	SRBD1	100	85.031	Octodon_degus
ENSDORG00000010468	Srbd1	84	58.103	ENSONIG00000000945	si:ch211-117n7.8	100	58.223	Oreochromis_niloticus
ENSDORG00000010468	Srbd1	100	87.185	ENSOCUG00000015385	SRBD1	100	87.689	Oryctolagus_cuniculus
ENSDORG00000010468	Srbd1	97	49.405	ENSORLG00000004427	si:ch211-117n7.8	97	49.405	Oryzias_latipes
ENSDORG00000010468	Srbd1	99	50.194	ENSORLG00020012792	si:ch211-117n7.8	99	50.339	Oryzias_latipes_hni
ENSDORG00000010468	Srbd1	99	50.532	ENSORLG00015018598	si:ch211-117n7.8	99	50.532	Oryzias_latipes_hsok
ENSDORG00000010468	Srbd1	96	52.277	ENSOMEG00000012229	si:ch211-117n7.8	92	55.678	Oryzias_melastigma
ENSDORG00000010468	Srbd1	100	81.307	ENSOGAG00000001076	SRBD1	100	81.307	Otolemur_garnettii
ENSDORG00000010468	Srbd1	100	82.233	ENSOARG00000005958	SRBD1	100	82.233	Ovis_aries
ENSDORG00000010468	Srbd1	100	86.633	ENSPPAG00000038442	SRBD1	100	86.633	Pan_paniscus
ENSDORG00000010468	Srbd1	100	88.442	ENSPPRG00000003449	SRBD1	100	88.442	Panthera_pardus
ENSDORG00000010468	Srbd1	100	88.643	ENSPTIG00000012495	SRBD1	100	88.643	Panthera_tigris_altaica
ENSDORG00000010468	Srbd1	100	86.432	ENSPTRG00000011889	SRBD1	100	86.432	Pan_troglodytes
ENSDORG00000010468	Srbd1	100	86.633	ENSPANG00000008063	SRBD1	100	86.633	Papio_anubis
ENSDORG00000010468	Srbd1	97	53.293	ENSPKIG00000021973	si:ch211-117n7.8	99	52.947	Paramormyrops_kingsleyae
ENSDORG00000010468	Srbd1	100	72.306	ENSPSIG00000008992	SRBD1	100	72.306	Pelodiscus_sinensis
ENSDORG00000010468	Srbd1	90	53.166	ENSPMGG00000013348	si:ch211-117n7.8	99	50.800	Periophthalmus_magnuspinnatus
ENSDORG00000010468	Srbd1	100	82.738	ENSPEMG00000020684	Srbd1	100	82.738	Peromyscus_maniculatus_bairdii
ENSDORG00000010468	Srbd1	96	53.702	ENSPFOG00000010650	si:ch211-117n7.8	99	50.048	Poecilia_formosa
ENSDORG00000010468	Srbd1	99	49.616	ENSPLAG00000002141	si:ch211-117n7.8	99	49.616	Poecilia_latipinna
ENSDORG00000010468	Srbd1	96	53.742	ENSPMEG00000018537	si:ch211-117n7.8	99	50.240	Poecilia_mexicana
ENSDORG00000010468	Srbd1	96	53.583	ENSPREG00000003258	si:ch211-117n7.8	94	53.583	Poecilia_reticulata
ENSDORG00000010468	Srbd1	100	90.351	ENSPPYG00000012444	SRBD1	93	90.351	Pongo_abelii
ENSDORG00000010468	Srbd1	82	81.635	ENSPCAG00000005629	SRBD1	86	81.635	Procavia_capensis
ENSDORG00000010468	Srbd1	100	75.150	ENSPCOG00000017669	SRBD1	100	75.150	Propithecus_coquereli
ENSDORG00000010468	Srbd1	100	77.286	ENSPVAG00000001782	SRBD1	100	77.286	Pteropus_vampyrus
ENSDORG00000010468	Srbd1	84	54.545	ENSPNYG00000000508	si:ch211-117n7.8	99	49.796	Pundamilia_nyererei
ENSDORG00000010468	Srbd1	96	56.635	ENSPNAG00000013492	SRBD1	94	56.635	Pygocentrus_nattereri
ENSDORG00000010468	Srbd1	100	80.468	ENSRNOG00000014720	Srbd1	99	81.606	Rattus_norvegicus
ENSDORG00000010468	Srbd1	99	86.506	ENSRBIG00000033486	SRBD1	99	86.506	Rhinopithecus_bieti
ENSDORG00000010468	Srbd1	99	86.506	ENSRROG00000041599	SRBD1	99	86.506	Rhinopithecus_roxellana
ENSDORG00000010468	Srbd1	100	86.332	ENSSBOG00000024982	SRBD1	100	86.332	Saimiri_boliviensis_boliviensis
ENSDORG00000010468	Srbd1	87	58.439	ENSSFOG00015001128	si:ch211-117n7.8	93	58.439	Scleropages_formosus
ENSDORG00000010468	Srbd1	98	51.181	ENSSMAG00000018256	si:ch211-117n7.8	98	51.280	Scophthalmus_maximus
ENSDORG00000010468	Srbd1	85	56.776	ENSSLDG00000023189	si:ch211-117n7.8	84	56.776	Seriola_lalandi_dorsalis
ENSDORG00000010468	Srbd1	100	76.829	ENSSARG00000009740	SRBD1	100	76.829	Sorex_araneus
ENSDORG00000010468	Srbd1	85	77.897	ENSSPUG00000010475	SRBD1	94	77.897	Sphenodon_punctatus
ENSDORG00000010468	Srbd1	84	56.005	ENSSPAG00000008092	-	84	56.228	Stegastes_partitus
ENSDORG00000010468	Srbd1	100	86.533	ENSSSCG00000008445	SRBD1	98	86.533	Sus_scrofa
ENSDORG00000010468	Srbd1	83	76.727	ENSTGUG00000003878	SRBD1	99	76.727	Taeniopygia_guttata
ENSDORG00000010468	Srbd1	83	57.775	ENSTRUG00000007080	si:ch211-117n7.8	92	58.134	Takifugu_rubripes
ENSDORG00000010468	Srbd1	99	50.195	ENSTNIG00000007464	si:ch211-117n7.8	99	50.195	Tetraodon_nigroviridis
ENSDORG00000010468	Srbd1	82	94.681	ENSTBEG00000004556	SRBD1	82	94.681	Tupaia_belangeri
ENSDORG00000010468	Srbd1	94	87.169	ENSTTRG00000011871	SRBD1	94	87.169	Tursiops_truncatus
ENSDORG00000010468	Srbd1	100	87.550	ENSUAMG00000008126	SRBD1	100	85.996	Ursus_americanus
ENSDORG00000010468	Srbd1	100	87.651	ENSUMAG00000012902	SRBD1	98	87.651	Ursus_maritimus
ENSDORG00000010468	Srbd1	91	87.528	ENSVPAG00000006825	SRBD1	100	87.528	Vicugna_pacos
ENSDORG00000010468	Srbd1	100	87.437	ENSVVUG00000005389	SRBD1	100	87.437	Vulpes_vulpes
ENSDORG00000010468	Srbd1	100	51.691	ENSXETG00000002760	srbd1	100	51.691	Xenopus_tropicalis
ENSDORG00000010468	Srbd1	84	56.941	ENSXMAG00000016861	si:ch211-117n7.8	84	56.941	Xiphophorus_maculatus