EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000010531 (Gene tree)
Gene ID: 105989657
Gene Symbol: Swt1
Alias: 1200016B10Rik
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 55716 bases
Position: chrKN672403.1:7891755-7947470
Accession: 105989657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000009896	PIN_4	PF13638.6	3.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000010530	-	2523	XM_013021796	ENSDORP00000009896	840 (aa)	XP_012877250	UPI000BAD23CF

Gene Model

Click here to download ENSDORG00000010531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010531	Swt1	98	78.271	ENSG00000116668	SWT1	91	78.271	Homo_sapiens
ENSDORG00000010531	Swt1	65	33.333	ENSAPOG00000014897	-	58	34.021	Acanthochromis_polyacanthus
ENSDORG00000010531	Swt1	95	79.208	ENSAMEG00000013585	SWT1	89	79.208	Ailuropoda_melanoleuca
ENSDORG00000010531	Swt1	65	32.988	ENSAOCG00000013932	swt1	58	33.505	Amphiprion_ocellaris
ENSDORG00000010531	Swt1	65	32.988	ENSAPEG00000009613	-	58	33.333	Amphiprion_percula
ENSDORG00000010531	Swt1	65	35.395	ENSATEG00000018946	swt1	57	34.708	Anabas_testudineus
ENSDORG00000010531	Swt1	71	53.167	ENSAPLG00000008607	SWT1	99	47.606	Anas_platyrhynchos
ENSDORG00000010531	Swt1	69	46.062	ENSACAG00000002276	SWT1	67	46.062	Anolis_carolinensis
ENSDORG00000010531	Swt1	95	79.259	ENSANAG00000027068	SWT1	89	79.259	Aotus_nancymaae
ENSDORG00000010531	Swt1	64	32.517	ENSACLG00000009742	swt1	68	31.542	Astatotilapia_calliptera
ENSDORG00000010531	Swt1	69	39.693	ENSAMXG00000010971	swt1	59	39.353	Astyanax_mexicanus
ENSDORG00000010531	Swt1	70	69.726	ENSBTAG00000004492	SWT1	99	69.726	Bos_taurus
ENSDORG00000010531	Swt1	97	76.932	ENSCJAG00000005544	SWT1	91	76.932	Callithrix_jacchus
ENSDORG00000010531	Swt1	95	78.234	ENSCAFG00000013543	SWT1	99	71.163	Canis_familiaris
ENSDORG00000010531	Swt1	95	77.943	ENSCAFG00020015648	SWT1	94	77.943	Canis_lupus_dingo
ENSDORG00000010531	Swt1	94	79.276	ENSCHIG00000023511	SWT1	99	83.249	Capra_hircus
ENSDORG00000010531	Swt1	95	78.545	ENSTSYG00000010470	SWT1	89	78.545	Carlito_syrichta
ENSDORG00000010531	Swt1	93	74.257	ENSCPOG00000014251	SWT1	100	74.257	Cavia_porcellus
ENSDORG00000010531	Swt1	95	80.000	ENSCCAG00000033926	SWT1	89	80.000	Cebus_capucinus
ENSDORG00000010531	Swt1	98	78.828	ENSCATG00000042210	SWT1	99	85.085	Cercocebus_atys
ENSDORG00000010531	Swt1	94	78.141	ENSCLAG00000013959	SWT1	89	78.141	Chinchilla_lanigera
ENSDORG00000010531	Swt1	98	78.110	ENSCSAG00000012895	SWT1	91	78.110	Chlorocebus_sabaeus
ENSDORG00000010531	Swt1	83	50.833	ENSCPBG00000015691	SWT1	81	50.135	Chrysemys_picta_bellii
ENSDORG00000010531	Swt1	98	78.391	ENSCANG00000032207	SWT1	99	84.497	Colobus_angolensis_palliatus
ENSDORG00000010531	Swt1	100	70.968	ENSCGRG00001022955	Swt1	100	69.522	Cricetulus_griseus_chok1gshd
ENSDORG00000010531	Swt1	100	70.968	ENSCGRG00000010224	Swt1	100	70.968	Cricetulus_griseus_crigri
ENSDORG00000010531	Swt1	66	34.118	ENSCSEG00000017352	swt1	75	33.782	Cynoglossus_semilaevis
ENSDORG00000010531	Swt1	67	39.652	ENSDARG00000094010	swt1	57	39.478	Danio_rerio
ENSDORG00000010531	Swt1	85	72.329	ENSDNOG00000005254	SWT1	88	72.329	Dasypus_novemcinctus
ENSDORG00000010531	Swt1	96	73.358	ENSEASG00005005530	SWT1	97	73.358	Equus_asinus_asinus
ENSDORG00000010531	Swt1	96	74.909	ENSECAG00000012085	SWT1	97	74.421	Equus_caballus
ENSDORG00000010531	Swt1	82	85.714	ENSEEUG00000003664	SWT1	80	85.714	Erinaceus_europaeus
ENSDORG00000010531	Swt1	65	36.897	ENSELUG00000020565	swt1	56	36.724	Esox_lucius
ENSDORG00000010531	Swt1	100	72.566	ENSFCAG00000011286	SWT1	100	72.566	Felis_catus
ENSDORG00000010531	Swt1	69	51.155	ENSFALG00000003206	SWT1	85	44.231	Ficedula_albicollis
ENSDORG00000010531	Swt1	95	78.261	ENSFDAG00000007569	SWT1	90	78.261	Fukomys_damarensis
ENSDORG00000010531	Swt1	69	51.871	ENSGALG00000034230	SWT1	67	52.041	Gallus_gallus
ENSDORG00000010531	Swt1	66	33.555	ENSGAFG00000007803	-	60	32.387	Gambusia_affinis
ENSDORG00000010531	Swt1	85	49.587	ENSGAGG00000025050	SWT1	99	55.882	Gopherus_agassizii
ENSDORG00000010531	Swt1	62	84.762	ENSGGOG00000041167	-	95	84.762	Gorilla_gorilla
ENSDORG00000010531	Swt1	66	32.328	ENSHBUG00000006188	swt1	68	31.658	Haplochromis_burtoni
ENSDORG00000010531	Swt1	99	75.029	ENSHGLG00000006542	SWT1	99	75.029	Heterocephalus_glaber_female
ENSDORG00000010531	Swt1	94	79.219	ENSHGLG00100014408	SWT1	89	79.219	Heterocephalus_glaber_male
ENSDORG00000010531	Swt1	79	33.577	ENSIPUG00000009113	-	69	34.257	Ictalurus_punctatus
ENSDORG00000010531	Swt1	95	77.833	ENSSTOG00000010356	SWT1	89	77.833	Ictidomys_tridecemlineatus
ENSDORG00000010531	Swt1	100	72.569	ENSJJAG00000015927	Swt1	100	72.569	Jaculus_jaculus
ENSDORG00000010531	Swt1	66	33.836	ENSKMAG00000012533	swt1	59	33.501	Kryptolebias_marmoratus
ENSDORG00000010531	Swt1	66	35.987	ENSLBEG00000020663	-	59	35.821	Labrus_bergylta
ENSDORG00000010531	Swt1	81	45.637	ENSLACG00000009194	SWT1	99	45.494	Latimeria_chalumnae
ENSDORG00000010531	Swt1	64	42.058	ENSLOCG00000001749	swt1	98	41.002	Lepisosteus_oculatus
ENSDORG00000010531	Swt1	70	85.544	ENSLAFG00000004346	-	99	85.544	Loxodonta_africana
ENSDORG00000010531	Swt1	98	78.708	ENSMFAG00000031793	SWT1	99	85.495	Macaca_fascicularis
ENSDORG00000010531	Swt1	98	75.948	ENSMMUG00000013882	SWT1	99	82.333	Macaca_mulatta
ENSDORG00000010531	Swt1	98	78.828	ENSMNEG00000035502	SWT1	99	85.495	Macaca_nemestrina
ENSDORG00000010531	Swt1	98	79.352	ENSMLEG00000038692	SWT1	99	85.254	Mandrillus_leucophaeus
ENSDORG00000010531	Swt1	66	32.328	ENSMZEG00005018489	swt1	68	31.926	Maylandia_zebra
ENSDORG00000010531	Swt1	69	50.332	ENSMGAG00000000973	SWT1	100	50.332	Meleagris_gallopavo
ENSDORG00000010531	Swt1	100	63.404	ENSMAUG00000007996	Swt1	97	63.626	Mesocricetus_auratus
ENSDORG00000010531	Swt1	95	82.302	ENSMICG00000014975	SWT1	89	82.302	Microcebus_murinus
ENSDORG00000010531	Swt1	100	71.156	ENSMOCG00000009776	Swt1	98	71.156	Microtus_ochrogaster
ENSDORG00000010531	Swt1	94	60.901	ENSMODG00000007472	SWT1	89	60.901	Monodelphis_domestica
ENSDORG00000010531	Swt1	65	36.014	ENSMALG00000019308	swt1	57	35.915	Monopterus_albus
ENSDORG00000010531	Swt1	99	69.058	MGP_CAROLIEiJ_G0014692	Swt1	99	69.731	Mus_caroli
ENSDORG00000010531	Swt1	99	68.462	ENSMUSG00000052748	Swt1	98	69.136	Mus_musculus
ENSDORG00000010531	Swt1	100	70.549	MGP_PahariEiJ_G0027928	Swt1	98	71.221	Mus_pahari
ENSDORG00000010531	Swt1	99	69.024	MGP_SPRETEiJ_G0015499	Swt1	98	69.697	Mus_spretus
ENSDORG00000010531	Swt1	95	78.067	ENSMPUG00000011913	SWT1	89	78.067	Mustela_putorius_furo
ENSDORG00000010531	Swt1	95	75.498	ENSMLUG00000001142	SWT1	88	75.498	Myotis_lucifugus
ENSDORG00000010531	Swt1	100	73.133	ENSNGAG00000021080	Swt1	98	73.579	Nannospalax_galili
ENSDORG00000010531	Swt1	98	77.791	ENSNLEG00000018031	SWT1	91	77.791	Nomascus_leucogenys
ENSDORG00000010531	Swt1	95	47.702	ENSMEUG00000000236	-	89	48.323	Notamacropus_eugenii
ENSDORG00000010531	Swt1	87	68.029	ENSOPRG00000000692	SWT1	88	68.029	Ochotona_princeps
ENSDORG00000010531	Swt1	64	35.832	ENSONIG00000009994	swt1	99	36.162	Oreochromis_niloticus
ENSDORG00000010531	Swt1	81	60.232	ENSOANG00000001013	-	97	55.897	Ornithorhynchus_anatinus
ENSDORG00000010531	Swt1	99	65.708	ENSOCUG00000004901	SWT1	99	65.708	Oryctolagus_cuniculus
ENSDORG00000010531	Swt1	64	33.737	ENSORLG00000009682	swt1	58	33.564	Oryzias_latipes
ENSDORG00000010531	Swt1	68	33.225	ENSORLG00020011654	swt1	62	32.846	Oryzias_latipes_hni
ENSDORG00000010531	Swt1	68	32.520	ENSORLG00015007734	swt1	63	32.358	Oryzias_latipes_hsok
ENSDORG00000010531	Swt1	67	33.895	ENSOMEG00000006607	swt1	59	33.727	Oryzias_melastigma
ENSDORG00000010531	Swt1	100	72.898	ENSOGAG00000016195	SWT1	100	72.898	Otolemur_garnettii
ENSDORG00000010531	Swt1	95	79.032	ENSOARG00000004156	SWT1	88	79.032	Ovis_aries
ENSDORG00000010531	Swt1	95	79.803	ENSPPAG00000021400	SWT1	99	73.731	Pan_paniscus
ENSDORG00000010531	Swt1	100	72.707	ENSPPRG00000023754	SWT1	100	72.707	Panthera_pardus
ENSDORG00000010531	Swt1	100	72.597	ENSPTIG00000021889	SWT1	100	72.597	Panthera_tigris_altaica
ENSDORG00000010531	Swt1	95	79.557	ENSPTRG00000001777	SWT1	99	73.510	Pan_troglodytes
ENSDORG00000010531	Swt1	98	78.469	ENSPANG00000005099	SWT1	99	84.746	Papio_anubis
ENSDORG00000010531	Swt1	67	35.951	ENSPKIG00000005979	swt1	59	35.826	Paramormyrops_kingsleyae
ENSDORG00000010531	Swt1	69	55.857	ENSPSIG00000008961	SWT1	85	47.535	Pelodiscus_sinensis
ENSDORG00000010531	Swt1	95	76.980	ENSPEMG00000008208	Swt1	88	76.980	Peromyscus_maniculatus_bairdii
ENSDORG00000010531	Swt1	95	60.501	ENSPCIG00000002443	SWT1	88	72.519	Phascolarctos_cinereus
ENSDORG00000010531	Swt1	66	33.387	ENSPFOG00000010988	-	70	32.633	Poecilia_formosa
ENSDORG00000010531	Swt1	64	33.727	ENSPLAG00000022908	-	58	32.709	Poecilia_latipinna
ENSDORG00000010531	Swt1	64	33.727	ENSPMEG00000006943	-	58	32.715	Poecilia_mexicana
ENSDORG00000010531	Swt1	98	77.671	ENSPPYG00000000415	SWT1	91	77.671	Pongo_abelii
ENSDORG00000010531	Swt1	94	66.667	ENSPCAG00000008337	SWT1	89	66.667	Procavia_capensis
ENSDORG00000010531	Swt1	73	85.714	ENSPCOG00000018195	-	94	85.714	Propithecus_coquereli
ENSDORG00000010531	Swt1	85	76.297	ENSPVAG00000005968	SWT1	80	76.177	Pteropus_vampyrus
ENSDORG00000010531	Swt1	66	32.601	ENSPNYG00000012934	swt1	68	31.658	Pundamilia_nyererei
ENSDORG00000010531	Swt1	66	37.913	ENSPNAG00000017795	swt1	58	37.456	Pygocentrus_nattereri
ENSDORG00000010531	Swt1	100	71.094	ENSRNOG00000032258	Swt1	98	71.763	Rattus_norvegicus
ENSDORG00000010531	Swt1	99	72.564	ENSRBIG00000040630	SWT1	99	81.431	Rhinopithecus_bieti
ENSDORG00000010531	Swt1	69	75.254	ENSRROG00000028596	SWT1	92	75.254	Rhinopithecus_roxellana
ENSDORG00000010531	Swt1	95	80.370	ENSSBOG00000028825	SWT1	89	80.370	Saimiri_boliviensis_boliviensis
ENSDORG00000010531	Swt1	92	60.777	ENSSHAG00000009241	SWT1	86	61.529	Sarcophilus_harrisii
ENSDORG00000010531	Swt1	67	39.719	ENSSFOG00015004895	swt1	57	39.719	Scleropages_formosus
ENSDORG00000010531	Swt1	72	32.769	ENSSMAG00000020761	-	50	33.077	Scophthalmus_maximus
ENSDORG00000010531	Swt1	65	34.354	ENSSDUG00000012345	swt1	58	34.418	Seriola_dumerili
ENSDORG00000010531	Swt1	65	34.184	ENSSLDG00000003821	swt1	58	34.247	Seriola_lalandi_dorsalis
ENSDORG00000010531	Swt1	55	78.992	ENSSARG00000011524	-	89	78.992	Sorex_araneus
ENSDORG00000010531	Swt1	84	47.051	ENSSPUG00000003899	SWT1	81	46.395	Sphenodon_punctatus
ENSDORG00000010531	Swt1	65	32.297	ENSSPAG00000001030	swt1	58	32.474	Stegastes_partitus
ENSDORG00000010531	Swt1	95	80.322	ENSSSCG00000015569	SWT1	90	80.446	Sus_scrofa
ENSDORG00000010531	Swt1	66	53.488	ENSTGUG00000003718	-	100	53.309	Taeniopygia_guttata
ENSDORG00000010531	Swt1	67	35.254	ENSTRUG00000006420	swt1	62	35.254	Takifugu_rubripes
ENSDORG00000010531	Swt1	95	77.531	ENSTTRG00000005914	SWT1	89	77.531	Tursiops_truncatus
ENSDORG00000010531	Swt1	95	79.430	ENSUAMG00000020937	SWT1	97	79.430	Ursus_americanus
ENSDORG00000010531	Swt1	95	78.934	ENSUMAG00000021918	SWT1	89	78.934	Ursus_maritimus
ENSDORG00000010531	Swt1	86	83.491	ENSVPAG00000011855	SWT1	81	83.491	Vicugna_pacos
ENSDORG00000010531	Swt1	100	73.973	ENSVVUG00000009182	SWT1	100	73.973	Vulpes_vulpes
ENSDORG00000010531	Swt1	65	33.618	ENSXMAG00000023472	-	59	33.390	Xiphophorus_maculatus