EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000010713 (Gene tree)
Gene ID: 105983285
Gene Symbol: Chd3
Alias: 2600010P09Rik|Chd7|Mi-2 alpha|Prp7|Prp9-1
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 23995 bases
Position: chrKN672365.1:11530692-11554686
Accession: 105983285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018721	ResIII	PF04851.15	1.5e-08	1	1
ENSDORP00000010071	ResIII	PF04851.15	1.5e-08	1	1
ENSDORP00000017980	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000023713	-	5793	-	ENSDORP00000018721	1930 (aa)	-	UPI000BACFC97
ENSDORT00000010716	-	5895	XM_013013123	ENSDORP00000010071	1964 (aa)	XP_012868577	UPI000BAD0DEA
ENSDORT00000036832	-	5895	-	ENSDORP00000017980	1964 (aa)	-	UPI000BAD1B59

Gene Model

Click here to download ENSDORG00000010713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000010713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000010713	Chd3	93	71.521	ENSDORG00000005923	Chd5	99	69.845
ENSDORG00000010713	Chd3	92	69.641	ENSDORG00000001847	Chd4	95	68.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000010713	Chd3	100	98.085	ENSG00000170004	CHD3	99	97.917	Homo_sapiens
ENSDORG00000010713	Chd3	86	76.721	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSDORG00000010713	Chd3	69	96.188	ENSAMEG00000003025	-	100	96.188	Ailuropoda_melanoleuca
ENSDORG00000010713	Chd3	86	76.322	ENSACIG00000019671	chd3	99	80.846	Amphilophus_citrinellus
ENSDORG00000010713	Chd3	92	80.756	ENSAOCG00000023784	chd3	98	81.250	Amphiprion_ocellaris
ENSDORG00000010713	Chd3	92	80.069	ENSAPEG00000006341	chd3	96	73.484	Amphiprion_percula
ENSDORG00000010713	Chd3	92	80.623	ENSATEG00000000848	chd3	95	81.579	Anabas_testudineus
ENSDORG00000010713	Chd3	99	84.883	ENSACAG00000004276	CHD3	95	84.732	Anolis_carolinensis
ENSDORG00000010713	Chd3	100	95.031	ENSANAG00000034323	CHD3	99	97.710	Aotus_nancymaae
ENSDORG00000010713	Chd3	98	73.361	ENSACLG00000009222	chd3	99	74.305	Astatotilapia_calliptera
ENSDORG00000010713	Chd3	100	97.409	ENSBTAG00000014377	CHD3	97	97.396	Bos_taurus
ENSDORG00000010713	Chd3	100	97.981	ENSCJAG00000014766	CHD3	98	97.981	Callithrix_jacchus
ENSDORG00000010713	Chd3	100	97.711	ENSCAFG00000016859	CHD3	98	97.711	Canis_familiaris
ENSDORG00000010713	Chd3	95	97.666	ENSCAFG00020007422	CHD3	100	97.653	Canis_lupus_dingo
ENSDORG00000010713	Chd3	100	97.763	ENSCHIG00000016737	CHD3	99	97.763	Capra_hircus
ENSDORG00000010713	Chd3	100	97.931	ENSTSYG00000035658	CHD3	98	97.931	Carlito_syrichta
ENSDORG00000010713	Chd3	100	94.611	ENSCAPG00000014864	CHD3	98	94.611	Cavia_aperea
ENSDORG00000010713	Chd3	100	97.153	ENSCPOG00000022653	CHD3	98	97.153	Cavia_porcellus
ENSDORG00000010713	Chd3	100	98.033	ENSCCAG00000034792	CHD3	98	97.915	Cebus_capucinus
ENSDORG00000010713	Chd3	100	97.930	ENSCATG00000041717	CHD3	98	97.930	Cercocebus_atys
ENSDORG00000010713	Chd3	100	97.931	ENSCLAG00000010523	CHD3	100	97.931	Chinchilla_lanigera
ENSDORG00000010713	Chd3	100	97.508	ENSCSAG00000011122	CHD3	99	97.508	Chlorocebus_sabaeus
ENSDORG00000010713	Chd3	90	84.418	ENSCPBG00000011966	CHD3	99	86.252	Chrysemys_picta_bellii
ENSDORG00000010713	Chd3	100	97.826	ENSCANG00000037641	CHD3	98	97.826	Colobus_angolensis_palliatus
ENSDORG00000010713	Chd3	100	97.001	ENSCGRG00001011306	Chd3	100	97.001	Cricetulus_griseus_chok1gshd
ENSDORG00000010713	Chd3	94	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSDORG00000010713	Chd3	92	79.801	ENSCSEG00000004489	chd3	98	79.801	Cynoglossus_semilaevis
ENSDORG00000010713	Chd3	88	81.673	ENSCVAG00000007293	chd3	95	81.673	Cyprinodon_variegatus
ENSDORG00000010713	Chd3	95	77.633	ENSDARG00000021405	chd3	99	76.775	Danio_rerio
ENSDORG00000010713	Chd3	100	83.047	ENSDNOG00000047846	CHD3	98	83.047	Dasypus_novemcinctus
ENSDORG00000010713	Chd3	98	91.178	ENSETEG00000017733	CHD3	100	91.178	Echinops_telfairi
ENSDORG00000010713	Chd3	76	69.418	ENSEBUG00000008310	chd3	99	70.441	Eptatretus_burgeri
ENSDORG00000010713	Chd3	93	97.600	ENSEASG00005019360	CHD3	100	97.600	Equus_asinus_asinus
ENSDORG00000010713	Chd3	93	97.654	ENSECAG00000010051	CHD3	100	97.654	Equus_caballus
ENSDORG00000010713	Chd3	93	94.915	ENSEEUG00000015205	CHD3	93	94.915	Erinaceus_europaeus
ENSDORG00000010713	Chd3	80	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSDORG00000010713	Chd3	100	97.457	ENSFCAG00000009629	CHD3	95	97.457	Felis_catus
ENSDORG00000010713	Chd3	100	95.526	ENSFDAG00000008220	CHD3	99	95.526	Fukomys_damarensis
ENSDORG00000010713	Chd3	90	80.305	ENSGMOG00000013599	chd3	91	80.812	Gadus_morhua
ENSDORG00000010713	Chd3	60	74.915	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSDORG00000010713	Chd3	99	70.979	ENSGACG00000019275	chd3	100	70.982	Gasterosteus_aculeatus
ENSDORG00000010713	Chd3	76	86.626	ENSGAGG00000013164	CHD3	98	86.626	Gopherus_agassizii
ENSDORG00000010713	Chd3	100	97.930	ENSGGOG00000013496	CHD3	98	97.930	Gorilla_gorilla
ENSDORG00000010713	Chd3	100	97.775	ENSHGLG00000012017	CHD3	99	97.661	Heterocephalus_glaber_female
ENSDORG00000010713	Chd3	89	90.485	ENSHGLG00100013902	CHD3	99	89.565	Heterocephalus_glaber_male
ENSDORG00000010713	Chd3	95	72.385	ENSHCOG00000010170	chd3	96	72.912	Hippocampus_comes
ENSDORG00000010713	Chd3	85	80.141	ENSIPUG00000003271	chd3	96	74.481	Ictalurus_punctatus
ENSDORG00000010713	Chd3	100	97.774	ENSSTOG00000025907	CHD3	100	97.774	Ictidomys_tridecemlineatus
ENSDORG00000010713	Chd3	100	97.103	ENSJJAG00000017633	Chd3	100	97.103	Jaculus_jaculus
ENSDORG00000010713	Chd3	88	90.047	ENSKMAG00000019292	chd3	97	75.607	Kryptolebias_marmoratus
ENSDORG00000010713	Chd3	87	87.826	ENSLBEG00000028485	chd3	92	80.620	Labrus_bergylta
ENSDORG00000010713	Chd3	97	75.064	ENSLACG00000008031	CHD3	98	75.381	Latimeria_chalumnae
ENSDORG00000010713	Chd3	98	77.020	ENSLOCG00000013965	chd3	97	77.255	Lepisosteus_oculatus
ENSDORG00000010713	Chd3	92	97.434	ENSLAFG00000000572	CHD3	99	93.369	Loxodonta_africana
ENSDORG00000010713	Chd3	100	97.878	ENSMFAG00000020113	CHD3	98	97.878	Macaca_fascicularis
ENSDORG00000010713	Chd3	100	95.270	ENSMMUG00000022221	CHD3	99	94.777	Macaca_mulatta
ENSDORG00000010713	Chd3	100	97.878	ENSMNEG00000001728	CHD3	99	97.104	Macaca_nemestrina
ENSDORG00000010713	Chd3	100	97.930	ENSMLEG00000032249	CHD3	98	97.930	Mandrillus_leucophaeus
ENSDORG00000010713	Chd3	86	76.868	ENSMAMG00000000564	chd3	99	77.346	Mastacembelus_armatus
ENSDORG00000010713	Chd3	100	96.432	ENSMAUG00000013873	Chd3	99	93.979	Mesocricetus_auratus
ENSDORG00000010713	Chd3	100	97.560	ENSMICG00000008741	CHD3	99	94.777	Microcebus_murinus
ENSDORG00000010713	Chd3	99	96.941	ENSMOCG00000004848	Chd3	100	96.941	Microtus_ochrogaster
ENSDORG00000010713	Chd3	96	74.799	ENSMMOG00000012699	chd3	99	74.135	Mola_mola
ENSDORG00000010713	Chd3	93	94.167	ENSMODG00000007509	CHD3	100	94.167	Monodelphis_domestica
ENSDORG00000010713	Chd3	100	96.746	MGP_CAROLIEiJ_G0016564	Chd3	100	96.872	Mus_caroli
ENSDORG00000010713	Chd3	100	96.901	ENSMUSG00000018474	Chd3	99	97.031	Mus_musculus
ENSDORG00000010713	Chd3	100	96.899	MGP_PahariEiJ_G0017695	Chd3	100	97.029	Mus_pahari
ENSDORG00000010713	Chd3	100	96.849	MGP_SPRETEiJ_G0017400	Chd3	100	96.978	Mus_spretus
ENSDORG00000010713	Chd3	87	97.433	ENSMPUG00000008861	CHD3	100	97.433	Mustela_putorius_furo
ENSDORG00000010713	Chd3	100	96.596	ENSMLUG00000014643	-	98	96.596	Myotis_lucifugus
ENSDORG00000010713	Chd3	100	97.204	ENSNGAG00000000773	Chd3	98	97.204	Nannospalax_galili
ENSDORG00000010713	Chd3	86	76.139	ENSNBRG00000000636	chd3	98	76.081	Neolamprologus_brichardi
ENSDORG00000010713	Chd3	98	95.349	ENSNLEG00000009770	CHD3	100	94.756	Nomascus_leucogenys
ENSDORG00000010713	Chd3	86	92.447	ENSMEUG00000005852	CHD3	86	92.447	Notamacropus_eugenii
ENSDORG00000010713	Chd3	95	95.989	ENSOPRG00000011069	CHD3	100	95.989	Ochotona_princeps
ENSDORG00000010713	Chd3	100	97.204	ENSODEG00000017785	CHD3	99	97.204	Octodon_degus
ENSDORG00000010713	Chd3	77	77.749	ENSONIG00000009292	chd3	100	74.808	Oreochromis_niloticus
ENSDORG00000010713	Chd3	99	92.621	ENSOCUG00000029299	CHD3	100	92.523	Oryctolagus_cuniculus
ENSDORG00000010713	Chd3	83	71.789	ENSORLG00000007107	chd3	93	71.911	Oryzias_latipes
ENSDORG00000010713	Chd3	58	72.992	ENSORLG00020008387	chd3	95	73.522	Oryzias_latipes_hni
ENSDORG00000010713	Chd3	86	77.267	ENSOMEG00000013691	chd3	99	78.222	Oryzias_melastigma
ENSDORG00000010713	Chd3	100	97.153	ENSOGAG00000003216	CHD3	99	97.153	Otolemur_garnettii
ENSDORG00000010713	Chd3	100	95.330	ENSOARG00000017855	CHD3	98	95.330	Ovis_aries
ENSDORG00000010713	Chd3	100	95.665	ENSPPAG00000032886	CHD3	98	95.665	Pan_paniscus
ENSDORG00000010713	Chd3	100	97.723	ENSPPRG00000000626	CHD3	98	97.723	Panthera_pardus
ENSDORG00000010713	Chd3	100	98.137	ENSPTRG00000008714	CHD3	98	98.137	Pan_troglodytes
ENSDORG00000010713	Chd3	100	97.711	ENSPANG00000023938	CHD3	98	97.711	Papio_anubis
ENSDORG00000010713	Chd3	95	80.461	ENSPKIG00000006305	chd3	99	80.381	Paramormyrops_kingsleyae
ENSDORG00000010713	Chd3	56	90.420	ENSPSIG00000010177	CHD3	98	90.693	Pelodiscus_sinensis
ENSDORG00000010713	Chd3	100	96.443	ENSPEMG00000014262	Chd3	99	96.443	Peromyscus_maniculatus_bairdii
ENSDORG00000010713	Chd3	100	93.165	ENSPCIG00000005442	CHD3	99	93.422	Phascolarctos_cinereus
ENSDORG00000010713	Chd3	96	76.667	ENSPFOG00000012464	chd3	91	76.705	Poecilia_formosa
ENSDORG00000010713	Chd3	88	83.133	ENSPLAG00000002887	chd3	96	83.133	Poecilia_latipinna
ENSDORG00000010713	Chd3	54	81.490	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSDORG00000010713	Chd3	90	84.328	ENSPREG00000011044	chd3	99	77.857	Poecilia_reticulata
ENSDORG00000010713	Chd3	98	94.971	ENSPPYG00000007940	CHD3	98	94.971	Pongo_abelii
ENSDORG00000010713	Chd3	96	96.828	ENSPCAG00000004350	CHD3	96	96.828	Procavia_capensis
ENSDORG00000010713	Chd3	100	97.827	ENSPCOG00000020952	CHD3	99	97.612	Propithecus_coquereli
ENSDORG00000010713	Chd3	87	94.977	ENSPVAG00000016344	CHD3	87	94.977	Pteropus_vampyrus
ENSDORG00000010713	Chd3	95	79.054	ENSPNAG00000020393	chd3	98	84.553	Pygocentrus_nattereri
ENSDORG00000010713	Chd3	93	96.678	ENSRNOG00000009722	Chd3	100	96.678	Rattus_norvegicus
ENSDORG00000010713	Chd3	100	94.686	ENSRBIG00000033562	CHD3	99	94.070	Rhinopithecus_bieti
ENSDORG00000010713	Chd3	100	97.930	ENSRROG00000029554	CHD3	98	97.930	Rhinopithecus_roxellana
ENSDORG00000010713	Chd3	100	98.033	ENSSBOG00000020719	CHD3	99	97.322	Saimiri_boliviensis_boliviensis
ENSDORG00000010713	Chd3	99	94.133	ENSSHAG00000014412	CHD3	100	94.185	Sarcophilus_harrisii
ENSDORG00000010713	Chd3	88	81.259	ENSSFOG00015023123	chd3	98	75.912	Scleropages_formosus
ENSDORG00000010713	Chd3	79	90.741	ENSSMAG00000006451	chd3	99	76.396	Scophthalmus_maximus
ENSDORG00000010713	Chd3	56	72.802	ENSSDUG00000005792	chd3	95	73.626	Seriola_dumerili
ENSDORG00000010713	Chd3	92	80.412	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSDORG00000010713	Chd3	100	97.510	ENSSSCG00000021363	CHD3	100	97.437	Sus_scrofa
ENSDORG00000010713	Chd3	77	76.560	ENSTRUG00000014990	chd3	89	76.370	Takifugu_rubripes
ENSDORG00000010713	Chd3	98	73.818	ENSTNIG00000012998	chd3	99	73.040	Tetraodon_nigroviridis
ENSDORG00000010713	Chd3	65	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSDORG00000010713	Chd3	99	97.845	ENSTTRG00000010295	CHD3	97	97.845	Tursiops_truncatus
ENSDORG00000010713	Chd3	93	96.353	ENSUAMG00000005475	CHD3	99	96.353	Ursus_americanus
ENSDORG00000010713	Chd3	57	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSDORG00000010713	Chd3	96	97.839	ENSVVUG00000028011	CHD3	99	97.548	Vulpes_vulpes
ENSDORG00000010713	Chd3	99	72.301	ENSXETG00000012991	chd3	97	69.945	Xenopus_tropicalis
ENSDORG00000010713	Chd3	53	82.976	ENSXCOG00000000809	chd3	96	83.202	Xiphophorus_couchianus
ENSDORG00000010713	Chd3	80	82.418	ENSXMAG00000016035	chd3	98	90.541	Xiphophorus_maculatus